RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 NLGN1Q8N2Q7 840 aa9.55□□□□□ -0.88
CNOT1-222ENST00000570139 PPM1HQ9ULR3 514 aa9.55□□□□□ -0.88
CNOT1-222ENST00000570139 UBR1Q8IWV7 1749 aa9.55□□□□□ -0.88
CNOT1-222ENST00000570139 PIK3C2GO75747 1445 aa9.55□□□□□ -0.88
CNOT1-222ENST00000570139 K7ELQ4 463 aaPredicted RBP9.54□□□□□ -0.88
CNOT1-222ENST00000570139 EREGO14944 169 aa9.54□□□□□ -0.88
CNOT1-222ENST00000570139 ATP4AP20648 1035 aa9.54□□□□□ -0.88
CNOT1-222ENST00000570139 PHKA2P46019 1235 aa9.54□□□□□ -0.88
CNOT1-222ENST00000570139 MLECQ14165 292 aa9.54□□□□□ -0.88
CNOT1-222ENST00000570139 ARSJQ5FYB0 599 aaPredicted RBP9.54□□□□□ -0.88
CNOT1-222ENST00000570139 ZNF697Q5TEC3 545 aa9.54□□□□□ -0.88
CNOT1-222ENST00000570139 SPRYD7Q5W111 196 aa9.54□□□□□ -0.88
CNOT1-222ENST00000570139 MKL1Q969V6 931 aa9.54□□□□□ -0.88
CNOT1-222ENST00000570139 CHRDQ9H2X0 955 aa9.54□□□□□ -0.88
CNOT1-222ENST00000570139 POLMQ9NP87 494 aaPredicted RBP9.54□□□□□ -0.88
CNOT1-222ENST00000570139 RIMS1Q86UR5 1692 aaKnown RBP9.54□□□□□ -0.88
CNOT1-222ENST00000570139 MYO3AQ8NEV4 1616 aa9.53□□□□□ -0.88
CNOT1-222ENST00000570139 ZNF142P52746 1687 aaPredicted RBP9.53□□□□□ -0.88
CNOT1-222ENST00000570139 UPP2O95045 317 aa9.53□□□□□ -0.88
CNOT1-222ENST00000570139 EGFRP00533 1210 aa9.53□□□□□ -0.88
CNOT1-222ENST00000570139 XRCC5P13010 732 aaKnown RBP9.53□□□□□ -0.88
CNOT1-222ENST00000570139 EDN3P14138 238 aa9.53□□□□□ -0.88
CNOT1-222ENST00000570139 CES1P23141 567 aa9.53□□□□□ -0.88
CNOT1-222ENST00000570139 HSD3B2P26439 372 aa9.53□□□□□ -0.88
CNOT1-222ENST00000570139 COL9A2Q14055 689 aaPredicted RBP9.53□□□□□ -0.88
CNOT1-222ENST00000570139 CCDC85BQ15834 202 aaPredicted RBP9.53□□□□□ -0.88
CNOT1-222ENST00000570139 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
CNOT1-222ENST00000570139 DIEXFQ68CQ4 756 aaKnown RBP9.53□□□□□ -0.88
CNOT1-222ENST00000570139 LRRC69Q6ZNQ3 347 aa9.53□□□□□ -0.88
CNOT1-222ENST00000570139 NLRP13Q86W25 1043 aa9.53□□□□□ -0.88
CNOT1-222ENST00000570139 INSM2Q96T92 566 aaPredicted RBP9.53□□□□□ -0.88
CNOT1-222ENST00000570139 CARD11Q9BXL7 1154 aa9.53□□□□□ -0.88
CNOT1-222ENST00000570139 A2ML1A8K2U0 1454 aa9.53□□□□□ -0.88
CNOT1-222ENST00000570139 SCAF11Q99590 1463 aaKnown RBP9.53□□□□□ -0.88
CNOT1-222ENST00000570139 A0A1B0GTH6 734 aa9.52□□□□□ -0.89
CNOT1-222ENST00000570139 TTC24A2A3L6 582 aaPredicted RBP9.52□□□□□ -0.89
CNOT1-222ENST00000570139 SPINT1O43278 529 aa9.52□□□□□ -0.89
CNOT1-222ENST00000570139 HSPA5P11021 654 aaKnown RBP9.52□□□□□ -0.89
CNOT1-222ENST00000570139 VEGFBP49765 207 aa9.52□□□□□ -0.89
CNOT1-222ENST00000570139 IDI1Q13907 227 aa9.52□□□□□ -0.89
CNOT1-222ENST00000570139 TTC39BQ5VTQ0 682 aaPredicted RBP9.52□□□□□ -0.89
CNOT1-222ENST00000570139 JAZF1Q86VZ6 243 aa9.52□□□□□ -0.89
CNOT1-222ENST00000570139 C1orf127Q8N9H9 656 aa9.52□□□□□ -0.89
CNOT1-222ENST00000570139 ANKRD24Q8TF21 1146 aa9.52□□□□□ -0.89
CNOT1-222ENST00000570139 ZIC5Q96T25 663 aa9.52□□□□□ -0.89
CNOT1-222ENST00000570139 EHD4Q9H223 541 aa9.52□□□□□ -0.89
CNOT1-222ENST00000570139 GJA3Q9Y6H8 435 aa9.52□□□□□ -0.89
CNOT1-222ENST00000570139 U2SURPO15042 1029 aaKnown RBP9.51□□□□□ -0.89
CNOT1-222ENST00000570139 GBP2P32456 591 aaPredicted RBP9.51□□□□□ -0.89
CNOT1-222ENST00000570139 NASPP49321 788 aaPredicted RBP9.51□□□□□ -0.89
CNOT1-222ENST00000570139 TYRO3Q06418 890 aa9.51□□□□□ -0.89
CNOT1-222ENST00000570139 FOXC1Q12948 553 aa9.51□□□□□ -0.89
CNOT1-222ENST00000570139 SERINC3Q13530 473 aa9.51□□□□□ -0.89
CNOT1-222ENST00000570139 PRPF40BQ6NWY9 871 aaKnown RBP9.51□□□□□ -0.89
CNOT1-222ENST00000570139 ZNF598Q86UK7 904 aaKnown RBP9.51□□□□□ -0.89
CNOT1-222ENST00000570139 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.51□□□□□ -0.89
CNOT1-222ENST00000570139 TMEM74Q96NL1 305 aa9.51□□□□□ -0.89
CNOT1-222ENST00000570139 ZNF408Q9H9D4 720 aa9.51□□□□□ -0.89
CNOT1-222ENST00000570139 EIF4A3P38919 411 aaKnown RBP9.5□□□□□ -0.89
CNOT1-222ENST00000570139 C3orf58Q8NDZ4 430 aa9.5□□□□□ -0.89
CNOT1-222ENST00000570139 SPACA7Q96KW9 195 aa9.5□□□□□ -0.89
CNOT1-222ENST00000570139 CEP63Q96MT8 703 aa9.5□□□□□ -0.89
CNOT1-222ENST00000570139 TRIM55Q9BYV6 548 aa9.5□□□□□ -0.89
CNOT1-222ENST00000570139 SIRPGQ9P1W8 387 aa9.5□□□□□ -0.89
CNOT1-222ENST00000570139 CNTN3Q9P232 1028 aa9.5□□□□□ -0.89
CNOT1-222ENST00000570139 ADAMTS1Q9UHI8 967 aa9.5□□□□□ -0.89
CNOT1-222ENST00000570139 ADGRB1O14514 1584 aa9.5□□□□□ -0.89
CNOT1-222ENST00000570139 IBSPP21815 317 aaPredicted RBP9.49□□□□□ -0.89
CNOT1-222ENST00000570139 SV2BQ7L1I2 683 aa9.49□□□□□ -0.89
CNOT1-222ENST00000570139 KLRG1Q96E93 195 aa9.49□□□□□ -0.89
CNOT1-222ENST00000570139 ZFYVE1Q9HBF4 777 aa9.49□□□□□ -0.89
CNOT1-222ENST00000570139 PKD2L1Q9P0L9 805 aa9.49□□□□□ -0.89
CNOT1-222ENST00000570139 EFR3BQ9Y2G0 817 aa9.49□□□□□ -0.89
CNOT1-222ENST00000570139 MRPL42Q9Y6G3 142 aaKnown RBP9.49□□□□□ -0.89
CNOT1-222ENST00000570139 SLIT1O75093 1534 aa9.49□□□□□ -0.89
CNOT1-222ENST00000570139 RIMS2Q9UQ26 1411 aa9.48□□□□□ -0.89
CNOT1-222ENST00000570139 POU4F2Q12837 409 aa9.48□□□□□ -0.89
CNOT1-222ENST00000570139 TCEAL1Q15170 157 aa9.48□□□□□ -0.89
CNOT1-222ENST00000570139 RNF187Q5TA31 235 aaPredicted RBP9.48□□□□□ -0.89
CNOT1-222ENST00000570139 CYP4X1Q8N118 509 aa9.48□□□□□ -0.89
CNOT1-222ENST00000570139 LINC00528Q8N1L1 170 aa9.48□□□□□ -0.89
CNOT1-222ENST00000570139 GLIS3Q8NEA6 775 aa9.48□□□□□ -0.89
CNOT1-222ENST00000570139 OXCT2Q9BYC2 517 aaPredicted RBP9.48□□□□□ -0.89
CNOT1-222ENST00000570139 DIP2AQ14689 1571 aa9.48□□□□□ -0.89
CNOT1-222ENST00000570139 CEP170BQ9Y4F5 1589 aaPredicted RBP9.48□□□□□ -0.89
CNOT1-222ENST00000570139 A0A1W2PNR3 127 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 A0A1W2PP55 124 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 PHF20L1A8MW92 1017 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 MINDY4BA8MYZ0 360 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 J3QL48 77 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 SOX9P48436 509 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 FCGRTP55899 365 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 LYSMD3Q7Z3D4 306 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 ZCRB1Q8TBF4 217 aaKnown RBP9.47□□□□□ -0.89
CNOT1-222ENST00000570139 NT5C1AQ9BXI3 368 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 TIMMDC1Q9NPL8 285 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 R3HCC1Q9Y3T6 440 aaKnown RBP9.47□□□□□ -0.89
CNOT1-222ENST00000570139 SUPT16HQ9Y5B9 1047 aaKnown RBP9.47□□□□□ -0.89
CNOT1-222ENST00000570139 ADGRF5Q8IZF2 1346 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 SETD1AO15047 1707 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms