RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 PSME4Q14997 1843 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 DLG5Q8TDM6 1919 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 PI4KAP2A4QPH2 592 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 SGPL1O95470 568 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 IGKV5-2P06315 115 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 CSF1RP07333 972 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 KLRK1P26718 216 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 BMP8BP34820 402 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 PPIL2Q13356 520 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 WDR43Q15061 677 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMG1-216ENST00000569122 UBE3BQ7Z3V4 1068 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 PI4KAP1Q8N8J0 262 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 U2AF1L4Q8WU68 220 aaKnown RBP11.09□□□□□ -0.63
SMG1-216ENST00000569122 IFT57Q9NWB7 429 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 STXBP5LQ9Y2K9 1186 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
SMG1-216ENST00000569122 NEURL1BA8MQ27 555 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 OSBPP22059 807 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 FCGRTP55899 365 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 PPATQ06203 517 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 DCAF15Q66K64 600 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 ANKRD23Q86SG2 305 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 DZIP1LQ8IYY4 767 aaKnown RBP11.08□□□□□ -0.64
SMG1-216ENST00000569122 DEFB123Q8N688 67 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 CNKSR2Q8WXI2 1034 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 TEPSINQ96N21 525 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 STK31Q9BXU1 1019 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 MYH16Q9H6N6 1097 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 TDRD3Q9H7E2 651 aaKnown RBP11.08□□□□□ -0.64
SMG1-216ENST00000569122 TTF2Q9UNY4 1162 aaKnown RBP11.08□□□□□ -0.64
SMG1-216ENST00000569122 PCDHAC2Q9Y5I4 1007 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 FAM205AQ6ZU69 1335 aa11.08□□□□□ -0.64
SMG1-216ENST00000569122 CUL9Q8IWT3 2517 aa11.07□□□□□ -0.64
SMG1-216ENST00000569122 TCP10L2B9ZVM9 353 aa11.07□□□□□ -0.64
SMG1-216ENST00000569122 ELL2O00472 640 aaPredicted RBP11.07□□□□□ -0.64
SMG1-216ENST00000569122 IRF6O14896 467 aa11.07□□□□□ -0.64
SMG1-216ENST00000569122 TFRCP02786 760 aaKnown RBP11.07□□□□□ -0.64
SMG1-216ENST00000569122 ZNF853P0CG23 659 aa11.07□□□□□ -0.64
SMG1-216ENST00000569122 IFIT5Q13325 482 aaKnown RBP11.07□□□□□ -0.64
SMG1-216ENST00000569122 MFSD14BQ5SR56 506 aa11.07□□□□□ -0.64
SMG1-216ENST00000569122 CCDC146Q8IYE0 955 aa11.07□□□□□ -0.64
SMG1-216ENST00000569122 LRCH3Q96II8 777 aa11.07□□□□□ -0.64
SMG1-216ENST00000569122 WRNIP1Q96S55 665 aa11.07□□□□□ -0.64
SMG1-216ENST00000569122 TMOD2Q9NZR1 351 aa11.07□□□□□ -0.64
SMG1-216ENST00000569122 STAP2Q9UGK3 403 aa11.07□□□□□ -0.64
SMG1-216ENST00000569122 COL6A3P12111 3177 aa11.06□□□□□ -0.64
SMG1-216ENST00000569122 HDLBPQ00341 1268 aaKnown RBP11.06□□□□□ -0.64
SMG1-216ENST00000569122 LRIT3Q3SXY7 679 aa11.06□□□□□ -0.64
SMG1-216ENST00000569122 FKBP1CQ5VVH2 108 aa11.06□□□□□ -0.64
SMG1-216ENST00000569122 FAM83AQ86UY5 434 aa11.06□□□□□ -0.64
SMG1-216ENST00000569122 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
SMG1-216ENST00000569122 PARK7Q99497 189 aaKnown RBP11.06□□□□□ -0.64
SMG1-216ENST00000569122 TMEM39BQ9GZU3 492 aa11.06□□□□□ -0.64
SMG1-216ENST00000569122 CPA4Q9UI42 421 aa11.06□□□□□ -0.64
SMG1-216ENST00000569122 PDHXO00330 501 aa11.05□□□□□ -0.64
SMG1-216ENST00000569122 SOX1O00570 391 aaPredicted RBP11.05□□□□□ -0.64
SMG1-216ENST00000569122 TAF5LO75529 589 aa11.05□□□□□ -0.64
SMG1-216ENST00000569122 CRKP46108 304 aa11.05□□□□□ -0.64
SMG1-216ENST00000569122 GCKRQ14397 625 aa11.05□□□□□ -0.64
SMG1-216ENST00000569122 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
SMG1-216ENST00000569122 TAF7LQ5H9L4 462 aa11.05□□□□□ -0.64
SMG1-216ENST00000569122 NECAB2Q7Z6G3 386 aa11.05□□□□□ -0.64
SMG1-216ENST00000569122 TBC1D22AQ8WUA7 517 aa11.05□□□□□ -0.64
SMG1-216ENST00000569122 MRIQ9BWK5 157 aa11.05□□□□□ -0.64
SMG1-216ENST00000569122 SNCAIPQ9Y6H5 919 aa11.05□□□□□ -0.64
SMG1-216ENST00000569122 IRS2Q9Y4H2 1338 aa11.05□□□□□ -0.64
SMG1-216ENST00000569122 HIBADHP31937 336 aaKnown RBP11.04□□□□□ -0.64
SMG1-216ENST00000569122 UBE4AQ14139 1066 aa11.04□□□□□ -0.64
SMG1-216ENST00000569122 ANKLE1Q8NAG6 615 aa11.04□□□□□ -0.64
SMG1-216ENST00000569122 TDRD7Q8NHU6 1098 aaKnown RBP11.04□□□□□ -0.64
SMG1-216ENST00000569122 ZKSCAN4Q969J2 545 aaPredicted RBP11.04□□□□□ -0.64
SMG1-216ENST00000569122 GDF15Q99988 308 aa11.04□□□□□ -0.64
SMG1-216ENST00000569122 ZNF341Q9BYN7 854 aa11.04□□□□□ -0.64
SMG1-216ENST00000569122 ADCY3O60266 1144 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 PRKCZQ05513 592 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 IRF5Q13568 498 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 CCDC57Q2TAC2 916 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 LDHAL6AQ6ZMR3 332 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 FASTKD5Q7L8L6 764 aaKnown RBP11.03□□□□□ -0.64
SMG1-216ENST00000569122 VPS37DQ86XT2 251 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 PIAS4Q8N2W9 510 aaPredicted RBP11.03□□□□□ -0.64
SMG1-216ENST00000569122 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.03□□□□□ -0.64
SMG1-216ENST00000569122 C8orf58Q8NAV2 365 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 TEKT1Q969V4 418 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 UNC93B1Q9H1C4 597 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 CNNM1Q9NRU3 951 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 KCNH4Q9UQ05 1017 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 JAG2Q9Y219 1238 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 CHMP3Q9Y3E7 222 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 AOX1Q06278 1338 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 ADGRA2Q96PE1 1338 aa11.03□□□□□ -0.64
SMG1-216ENST00000569122 SNAP23O00161 211 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 CXCL11O14625 94 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 PLIN1O60240 522 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 ECM2O94769 699 aaPredicted RBP11.02□□□□□ -0.65
SMG1-216ENST00000569122 CTGFP29279 349 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 TDHQ8IZJ6 230 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 LINS1Q8NG48 757 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 DEFB118Q96PH6 123 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 COL25A1Q9BXS0 654 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms