RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 NF2P35240 595 aa18.25■□□□□ 0.51
FANCA-220ENST00000566409 CRKP46108 304 aa18.25■□□□□ 0.51
FANCA-220ENST00000566409 TTLL12Q14166 644 aaPredicted RBP18.25■□□□□ 0.51
FANCA-220ENST00000566409 ATP2B3Q16720 1220 aa18.25■□□□□ 0.51
FANCA-220ENST00000566409 SPDYE2Q495Y8 402 aa18.25■□□□□ 0.51
FANCA-220ENST00000566409 LDLRAD1Q5T700 205 aa18.25■□□□□ 0.51
FANCA-220ENST00000566409 TBC1D22AQ8WUA7 517 aa18.25■□□□□ 0.51
FANCA-220ENST00000566409 ZNF70Q9UC06 446 aaPredicted RBP18.25■□□□□ 0.51
FANCA-220ENST00000566409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.25■□□□□ 0.51
FANCA-220ENST00000566409 RASA3Q14644 834 aa18.24■□□□□ 0.51
FANCA-220ENST00000566409 NBPF12Q5TAG4 269 aaPredicted RBP18.24■□□□□ 0.51
FANCA-220ENST00000566409 CAPN15O75808 1086 aa18.23■□□□□ 0.51
FANCA-220ENST00000566409 GNAI2P04899 355 aa18.23■□□□□ 0.51
FANCA-220ENST00000566409 ADORA1P30542 326 aa18.23■□□□□ 0.51
FANCA-220ENST00000566409 HDLBPQ00341 1268 aaKnown RBP18.23■□□□□ 0.51
FANCA-220ENST00000566409 CDAN1Q8IWY9 1227 aa18.23■□□□□ 0.51
FANCA-220ENST00000566409 RNF186Q9NXI6 227 aa18.23■□□□□ 0.51
FANCA-220ENST00000566409 ANGEL1Q9UNK9 670 aaKnown RBP18.23■□□□□ 0.51
FANCA-220ENST00000566409 PPP2R3BQ9Y5P8 575 aa18.23■□□□□ 0.51
FANCA-220ENST00000566409 PNMA6EA0A0J9YXQ4 647 aa18.22■□□□□ 0.51
FANCA-220ENST00000566409 RLBP1P12271 317 aa18.22■□□□□ 0.51
FANCA-220ENST00000566409 PHKA1P46020 1223 aa18.22■□□□□ 0.51
FANCA-220ENST00000566409 TIMM10P62072 90 aa18.22■□□□□ 0.51
FANCA-220ENST00000566409 MAP3K11Q16584 847 aa18.22■□□□□ 0.51
FANCA-220ENST00000566409 ARMC9Q7Z3E5 817 aa18.22■□□□□ 0.51
FANCA-220ENST00000566409 TEPSINQ96N21 525 aa18.22■□□□□ 0.51
FANCA-220ENST00000566409 MRIQ9BWK5 157 aa18.22■□□□□ 0.51
FANCA-220ENST00000566409 TRPA1O75762 1119 aa18.21■□□□□ 0.51
FANCA-220ENST00000566409 TFCP2Q12800 502 aa18.21■□□□□ 0.51
FANCA-220ENST00000566409 APOBEC3HQ6NTF7 200 aaKnown RBP18.21■□□□□ 0.51
FANCA-220ENST00000566409 ZDHHC15Q96MV8 337 aa18.21■□□□□ 0.51
FANCA-220ENST00000566409 SUGT1Q9Y2Z0 365 aa18.21■□□□□ 0.51
FANCA-220ENST00000566409 USP2O75604 605 aaPredicted RBP18.2■□□□□ 0.5
FANCA-220ENST00000566409 CACNB3P54284 484 aa18.2■□□□□ 0.5
FANCA-220ENST00000566409 SUPT20HL1Q3ZLR7 823 aa18.2■□□□□ 0.5
FANCA-220ENST00000566409 WDR66Q8TBY9 1149 aa18.2■□□□□ 0.5
FANCA-220ENST00000566409 TEKT1Q969V4 418 aa18.2■□□□□ 0.5
FANCA-220ENST00000566409 CLMNQ96JQ2 1002 aa18.2■□□□□ 0.5
FANCA-220ENST00000566409 SAGE1Q9NXZ1 904 aa18.2■□□□□ 0.5
FANCA-220ENST00000566409 OTOFQ9HC10 1997 aa18.2■□□□□ 0.5
FANCA-220ENST00000566409 TCP10L2B9ZVM9 353 aa18.19■□□□□ 0.5
FANCA-220ENST00000566409 MKRN3Q13064 507 aaKnown RBP18.19■□□□□ 0.5
FANCA-220ENST00000566409 CCDC102BQ68D86 513 aa18.19■□□□□ 0.5
FANCA-220ENST00000566409 TMEM39BQ9GZU3 492 aa18.19■□□□□ 0.5
FANCA-220ENST00000566409 ZBTB22O15209 634 aa18.18■□□□□ 0.5
FANCA-220ENST00000566409 PRDX5P30044 214 aa18.18■□□□□ 0.5
FANCA-220ENST00000566409 TNFAIP1Q13829 316 aa18.18■□□□□ 0.5
FANCA-220ENST00000566409 HHIPL2Q6UWX4 724 aa18.18■□□□□ 0.5
FANCA-220ENST00000566409 REM2Q8IYK8 340 aaPredicted RBP18.18■□□□□ 0.5
FANCA-220ENST00000566409 LAMB1P07942 1786 aa18.17■□□□□ 0.5
FANCA-220ENST00000566409 A0A1B0GUL7 405 aa18.17■□□□□ 0.5
FANCA-220ENST00000566409 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
FANCA-220ENST00000566409 PPP1R12BO60237 982 aaPredicted RBP18.17■□□□□ 0.5
FANCA-220ENST00000566409 TM4SF4P48230 202 aa18.17■□□□□ 0.5
FANCA-220ENST00000566409 POLA2Q14181 598 aa18.17■□□□□ 0.5
FANCA-220ENST00000566409 DIXDC1Q155Q3 683 aa18.17■□□□□ 0.5
FANCA-220ENST00000566409 SPRYD7Q5W111 196 aa18.17■□□□□ 0.5
FANCA-220ENST00000566409 XAGE2Q96GT9 111 aa18.17■□□□□ 0.5
FANCA-220ENST00000566409 C1orf115Q9H7X2 142 aa18.17■□□□□ 0.5
FANCA-220ENST00000566409 GNL3LQ9NVN8 582 aaKnown RBP18.17■□□□□ 0.5
FANCA-220ENST00000566409 MYH2Q9UKX2 1941 aa18.16■□□□□ 0.5
FANCA-220ENST00000566409 SEMA3EO15041 775 aa18.16■□□□□ 0.5
FANCA-220ENST00000566409 RASGRF1Q13972 1273 aa18.16■□□□□ 0.5
FANCA-220ENST00000566409 SLC10A4Q96EP9 437 aa18.16■□□□□ 0.5
FANCA-220ENST00000566409 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.16■□□□□ 0.5
FANCA-220ENST00000566409 DENND2AQ9ULE3 1009 aa18.16■□□□□ 0.5
FANCA-220ENST00000566409 DAGLAQ9Y4D2 1042 aa18.16■□□□□ 0.5
FANCA-220ENST00000566409 MAST3O60307 1309 aa18.16■□□□□ 0.5
FANCA-220ENST00000566409 SALL1Q9NSC2 1324 aa18.16■□□□□ 0.5
FANCA-220ENST00000566409 ATP8B2P98198 1209 aa18.15■□□□□ 0.5
FANCA-220ENST00000566409 FTSJ3Q8IY81 847 aaKnown RBP18.15■□□□□ 0.5
FANCA-220ENST00000566409 SSH3Q8TE77 659 aa18.15■□□□□ 0.5
FANCA-220ENST00000566409 ABHD8Q96I13 439 aa18.15■□□□□ 0.5
FANCA-220ENST00000566409 AKAP2Q9Y2D5 859 aa18.15■□□□□ 0.5
FANCA-220ENST00000566409 UNCXA6NJT0 531 aa18.14■□□□□ 0.49
FANCA-220ENST00000566409 GJA5P36382 358 aa18.14■□□□□ 0.49
FANCA-220ENST00000566409 IREB2P48200 963 aaKnown RBP18.14■□□□□ 0.49
FANCA-220ENST00000566409 TNNI2P48788 182 aa18.14■□□□□ 0.49
FANCA-220ENST00000566409 FKBP1CQ5VVH2 108 aa18.14■□□□□ 0.49
FANCA-220ENST00000566409 ITPRIPQ8IWB1 547 aa18.14■□□□□ 0.49
FANCA-220ENST00000566409 PANK1Q8TE04 598 aa18.14■□□□□ 0.49
FANCA-220ENST00000566409 WNK4Q96J92 1243 aa18.14■□□□□ 0.49
FANCA-220ENST00000566409 LDHBP07195 334 aaKnown RBP18.13■□□□□ 0.49
FANCA-220ENST00000566409 G3BP1Q13283 466 aaKnown RBP eCLIP18.13■□□□□ 0.49
FANCA-220ENST00000566409 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.13■□□□□ 0.49
FANCA-220ENST00000566409 FAM83AQ86UY5 434 aa18.13■□□□□ 0.49
FANCA-220ENST00000566409 NEUROD6Q96NK8 337 aa18.13■□□□□ 0.49
FANCA-220ENST00000566409 TBC1D8O95759 1140 aa18.12■□□□□ 0.49
FANCA-220ENST00000566409 CDC42EP5Q6NZY7 148 aa18.12■□□□□ 0.49
FANCA-220ENST00000566409 ANKRD13AQ8IZ07 590 aa18.12■□□□□ 0.49
FANCA-220ENST00000566409 MCOLN1Q9GZU1 580 aa18.12■□□□□ 0.49
FANCA-220ENST00000566409 R3HDMLQ9H3Y0 253 aa18.12■□□□□ 0.49
FANCA-220ENST00000566409 PDS5AQ29RF7 1337 aaKnown RBP18.12■□□□□ 0.49
FANCA-220ENST00000566409 ZBTB48P10074 688 aaPredicted RBP18.11■□□□□ 0.49
FANCA-220ENST00000566409 NFIAQ12857 509 aa18.11■□□□□ 0.49
FANCA-220ENST00000566409 MVPQ14764 893 aaKnown RBP18.11■□□□□ 0.49
FANCA-220ENST00000566409 PI16Q6UXB8 463 aa18.11■□□□□ 0.49
FANCA-220ENST00000566409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.11■□□□□ 0.49
FANCA-220ENST00000566409 HMG20BQ9P0W2 317 aa18.11■□□□□ 0.49
FANCA-220ENST00000566409 AK9Q5TCS8 1911 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms