RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 SENP7Q9BQF6 1050 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 TINF2Q9BSI4 451 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 ANKRD30BQ9BXX2 1392 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 SSH2Q76I76 1423 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 BPNT1O95861 308 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 CDC27P30260 824 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 ADD2P35612 726 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 POU5F1BQ06416 359 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 ZNF394Q53GI3 561 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 CHPFQ8IZ52 775 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 UBR7Q8N806 425 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 PRIMPOLQ96LW4 560 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 ZMIZ1Q9ULJ6 1067 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 SPG7Q9UQ90 795 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 RBM19Q9Y4C8 960 aaKnown RBP3.7□□□□□ -1.82
CHD9-216ENST00000565803 UBR3Q6ZT12 1888 aa3.7□□□□□ -1.82
CHD9-216ENST00000565803 NRXN2Q9P2S2 1712 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 SPTLC1O15269 473 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 FMNL1O95466 1100 aaPredicted RBP3.69□□□□□ -1.82
CHD9-216ENST00000565803 RAD51AP2Q09MP3 1159 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 NBPF9Q3BBW0 867 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 SOGA3Q5TF21 947 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 ZNF354CQ86Y25 554 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 TEX19Q8NA77 164 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 STAC3Q96MF2 364 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 DUSP9Q99956 384 aaKnown RBP3.69□□□□□ -1.82
CHD9-216ENST00000565803 CENPOQ9BU64 300 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 CXorf56Q9H5V9 222 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 ANAPC4Q9UJX5 808 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 NOB1Q9ULX3 412 aaKnown RBP3.69□□□□□ -1.82
CHD9-216ENST00000565803 METP08581 1390 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 SCN4AP35499 1836 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 HSP90AB1P08238 724 aaKnown RBP3.69□□□□□ -1.82
CHD9-216ENST00000565803 MYL3P08590 195 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 NUCB1Q02818 461 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 ZNF746Q6NUN9 644 aaPredicted RBP3.69□□□□□ -1.82
CHD9-216ENST00000565803 RSPH1Q8WYR4 309 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.69□□□□□ -1.82
CHD9-216ENST00000565803 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.69□□□□□ -1.82
CHD9-216ENST00000565803 VDRP11473 427 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 MAN1A1P33908 653 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 GNALP38405 381 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 ANP32AP39687 249 aaKnown RBP3.69□□□□□ -1.82
CHD9-216ENST00000565803 GEMIN4P57678 1058 aaKnown RBP3.69□□□□□ -1.82
CHD9-216ENST00000565803 AMPD3Q01432 767 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 KIAA2012Q0VF49 1180 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 SEPT2Q15019 361 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 LONRF1Q17RB8 773 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 CCDC70Q6NSX1 233 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 RIC3Q7Z5B4 369 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 C14orf80Q86SX3 495 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 SNX32Q86XE0 403 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 CEP120Q8N960 986 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 TBC1D31Q96DN5 1066 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 ZNF512BQ96KM6 892 aaPredicted RBP3.69□□□□□ -1.82
CHD9-216ENST00000565803 CD2APQ9Y5K6 639 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 NAIPQ13075 1403 aa3.69□□□□□ -1.82
CHD9-216ENST00000565803 TBX3O15119 743 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 LDHBP07195 334 aaKnown RBP3.68□□□□□ -1.82
CHD9-216ENST00000565803 DNAJB2P25686 324 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 HMGB2P26583 209 aaKnown RBP3.68□□□□□ -1.82
CHD9-216ENST00000565803 LSM11P83369 360 aaKnown RBP eCLIP3.68□□□□□ -1.82
CHD9-216ENST00000565803 SLMAPQ14BN4 828 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 MFSD4BQ5TF39 518 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 MSL1Q68DK7 614 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 ACRBPQ8NEB7 543 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 RUNDC1Q96C34 613 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 SMC4Q9NTJ3 1288 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 IP6K2Q9UHH9 426 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 BICDL2A1A5D9 508 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 HSPA1AP0DMV8 641 aaKnown RBP3.68□□□□□ -1.82
CHD9-216ENST00000565803 HSPA1BP0DMV9 641 aaKnown RBP3.68□□□□□ -1.82
CHD9-216ENST00000565803 SETDB1Q15047 1291 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 NBPF6Q5VWK0 638 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 NBPF5PQ86XG9 351 aaPredicted RBP3.68□□□□□ -1.82
CHD9-216ENST00000565803 CPXCR1Q8N123 301 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 CACTIN-AS1Q8N1I8 211 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 NBPF4Q96M43 638 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 RNF19AQ9NV58 838 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 CFDP1Q9UEE9 299 aaPredicted RBP3.68□□□□□ -1.82
CHD9-216ENST00000565803 PARP2Q9UGN5 583 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 FEZ2Q9UHY8 353 aaPredicted RBP3.68□□□□□ -1.82
CHD9-216ENST00000565803 DCTN4Q9UJW0 460 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 RABL2BQ9UNT1 228 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 SLC4A7Q9Y6M7 1214 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 ROBO2Q9HCK4 1378 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 NBPF26B4DH59 902 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 SMAPO00193 183 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 CBFA2T2O43439 604 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 GPR37L1O60883 481 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 SH3BGRP55822 239 aaPredicted RBP3.68□□□□□ -1.82
CHD9-216ENST00000565803 PPP4CP60510 307 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 FBXO33Q7Z6M2 555 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 PGBD3Q8N328 593 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 TGIF2Q9GZN2 237 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 CYLDQ9NQC7 956 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 GGT7Q9UJ14 662 aa3.68□□□□□ -1.82
CHD9-216ENST00000565803 FBXO2Q9UK22 296 aaPredicted RBP3.68□□□□□ -1.82
CHD9-216ENST00000565803 RCCD1A6NED2 376 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 VAMP1P23763 118 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms