RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 KIF4BQ2VIQ3 1234 aa12□□□□□ -0.49
CNOT1-207ENST00000565605 KLHDC4Q8TBB5 520 aa12□□□□□ -0.49
CNOT1-207ENST00000565605 GGA3Q9NZ52 723 aa12□□□□□ -0.49
CNOT1-207ENST00000565605 VIL1P09327 827 aaKnown RBP11.99□□□□□ -0.49
CNOT1-207ENST00000565605 KLRK1P26718 216 aa11.99□□□□□ -0.49
CNOT1-207ENST00000565605 RFX5P48382 616 aaPredicted RBP11.99□□□□□ -0.49
CNOT1-207ENST00000565605 LRRC24Q50LG9 513 aa11.99□□□□□ -0.49
CNOT1-207ENST00000565605 METTL24Q5JXM2 366 aa11.99□□□□□ -0.49
CNOT1-207ENST00000565605 ZNF804AQ7Z570 1209 aa11.99□□□□□ -0.49
CNOT1-207ENST00000565605 TXNRD3Q86VQ6 643 aa11.99□□□□□ -0.49
CNOT1-207ENST00000565605 CDCA5Q96FF9 252 aa11.99□□□□□ -0.49
CNOT1-207ENST00000565605 RIPOR2Q9Y4F9 1068 aa11.99□□□□□ -0.49
CNOT1-207ENST00000565605 USP17L3A6NCW0 530 aa11.98□□□□□ -0.49
CNOT1-207ENST00000565605 USP17L4A6NCW7 530 aa11.98□□□□□ -0.49
CNOT1-207ENST00000565605 SNAP23O00161 211 aa11.98□□□□□ -0.49
CNOT1-207ENST00000565605 EYA2O00167 538 aa11.98□□□□□ -0.49
CNOT1-207ENST00000565605 RLBP1P12271 317 aa11.98□□□□□ -0.49
CNOT1-207ENST00000565605 PTPN12Q05209 780 aaKnown RBP11.98□□□□□ -0.49
CNOT1-207ENST00000565605 UBE4AQ14139 1066 aa11.98□□□□□ -0.49
CNOT1-207ENST00000565605 C15orf52Q6ZUT6 534 aaKnown RBP11.98□□□□□ -0.49
CNOT1-207ENST00000565605 USP17L1Q7RTZ2 530 aa11.98□□□□□ -0.49
CNOT1-207ENST00000565605 SULF1Q8IWU6 871 aa11.98□□□□□ -0.49
CNOT1-207ENST00000565605 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
CNOT1-207ENST00000565605 FBXW7Q969H0 707 aa11.98□□□□□ -0.49
CNOT1-207ENST00000565605 SCAF8Q9UPN6 1271 aaKnown RBP11.98□□□□□ -0.49
CNOT1-207ENST00000565605 POLR2AP24928 1970 aaKnown RBP11.98□□□□□ -0.49
CNOT1-207ENST00000565605 SRGAP3O43295 1099 aa11.97□□□□□ -0.49
CNOT1-207ENST00000565605 CIAO1O76071 339 aa11.97□□□□□ -0.49
CNOT1-207ENST00000565605 ZNF280AP59817 542 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-207ENST00000565605 MTX1Q13505 466 aa11.97□□□□□ -0.49
CNOT1-207ENST00000565605 SCARF1Q14162 830 aa11.97□□□□□ -0.49
CNOT1-207ENST00000565605 ANGEL2Q5VTE6 544 aaKnown RBP11.97□□□□□ -0.49
CNOT1-207ENST00000565605 RSBN1LQ6PCB5 846 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-207ENST00000565605 MOB2Q70IA6 237 aa11.97□□□□□ -0.49
CNOT1-207ENST00000565605 RASAL3Q86YV0 1011 aa11.97□□□□□ -0.49
CNOT1-207ENST00000565605 PANK1Q8TE04 598 aa11.97□□□□□ -0.49
CNOT1-207ENST00000565605 SIL1Q9H173 461 aa11.97□□□□□ -0.49
CNOT1-207ENST00000565605 CD209Q9NNX6 404 aa11.97□□□□□ -0.49
CNOT1-207ENST00000565605 FBXO3Q9UK99 471 aa11.97□□□□□ -0.49
CNOT1-207ENST00000565605 SCN9AQ15858 1988 aa11.96□□□□□ -0.49
CNOT1-207ENST00000565605 IRS2Q9Y4H2 1338 aa11.96□□□□□ -0.49
CNOT1-207ENST00000565605 PDE4DIPQ5VU43 2346 aa11.96□□□□□ -0.49
CNOT1-207ENST00000565605 ZBTB7BO15156 539 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-207ENST00000565605 PDE8BO95263 885 aa11.96□□□□□ -0.49
CNOT1-207ENST00000565605 STRIP1Q5VSL9 837 aa11.96□□□□□ -0.49
CNOT1-207ENST00000565605 CTU1Q7Z7A3 348 aaKnown RBP11.96□□□□□ -0.49
CNOT1-207ENST00000565605 A0A1B0GUL6 1792 aa11.95□□□□□ -0.5
CNOT1-207ENST00000565605 MYO3BQ8WXR4 1341 aa11.95□□□□□ -0.5
CNOT1-207ENST00000565605 IFIT1P09914 478 aaKnown RBP11.95□□□□□ -0.5
CNOT1-207ENST00000565605 GTF2IP78347 998 aa11.95□□□□□ -0.5
CNOT1-207ENST00000565605 PUM3Q15397 648 aaKnown RBP11.95□□□□□ -0.5
CNOT1-207ENST00000565605 CAVIN4Q5BKX8 364 aa11.95□□□□□ -0.5
CNOT1-207ENST00000565605 PRAMEF18Q5VWM3 479 aa11.95□□□□□ -0.5
CNOT1-207ENST00000565605 VPS37DQ86XT2 251 aa11.95□□□□□ -0.5
CNOT1-207ENST00000565605 AGBL3Q8NEM8 1001 aa11.95□□□□□ -0.5
CNOT1-207ENST00000565605 GMLQ99445 158 aa11.95□□□□□ -0.5
CNOT1-207ENST00000565605 COPRSQ9NQ92 184 aa11.95□□□□□ -0.5
CNOT1-207ENST00000565605 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
CNOT1-207ENST00000565605 PA2G4Q9UQ80 394 aaKnown RBP11.95□□□□□ -0.5
CNOT1-207ENST00000565605 ZNF609O15014 1411 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 TBC1D8O95759 1140 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 SLC5A1P13866 664 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 IL1R1P14778 569 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 HIBADHP31937 336 aaKnown RBP11.94□□□□□ -0.5
CNOT1-207ENST00000565605 IL15P40933 162 aaPredicted RBP11.94□□□□□ -0.5
CNOT1-207ENST00000565605 GYG1P46976 350 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 MVPQ14764 893 aaKnown RBP11.94□□□□□ -0.5
CNOT1-207ENST00000565605 DACT2Q5SW24 774 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 TTLL5Q6EMB2 1281 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 ATG9AQ7Z3C6 839 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 VGLL2Q8N8G2 317 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 CHMP4BQ9H444 224 aaKnown RBP11.94□□□□□ -0.5
CNOT1-207ENST00000565605 C1orf115Q9H7X2 142 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 CEP126Q9P2H0 1117 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 DDX19BQ9UMR2 479 aa11.94□□□□□ -0.5
CNOT1-207ENST00000565605 UBE2Q2LH0YL09 131 aa11.93□□□□□ -0.5
CNOT1-207ENST00000565605 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
CNOT1-207ENST00000565605 ATP2B3Q16720 1220 aa11.93□□□□□ -0.5
CNOT1-207ENST00000565605 PRPF38BQ5VTL8 546 aaKnown RBP11.93□□□□□ -0.5
CNOT1-207ENST00000565605 OGFOD1Q8N543 542 aa11.93□□□□□ -0.5
CNOT1-207ENST00000565605 ZNF296Q8WUU4 475 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-207ENST00000565605 LPIN2Q92539 896 aa11.93□□□□□ -0.5
CNOT1-207ENST00000565605 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
CNOT1-207ENST00000565605 MYOZ2Q9NPC6 264 aa11.93□□□□□ -0.5
CNOT1-207ENST00000565605 COG6Q9Y2V7 657 aa11.93□□□□□ -0.5
CNOT1-207ENST00000565605 PNMA6EA0A0J9YXQ4 647 aa11.92□□□□□ -0.5
CNOT1-207ENST00000565605 FRAT2O75474 233 aaPredicted RBP11.92□□□□□ -0.5
CNOT1-207ENST00000565605 NUBP1P53384 320 aa11.92□□□□□ -0.5
CNOT1-207ENST00000565605 FKBP1BP68106 108 aa11.92□□□□□ -0.5
CNOT1-207ENST00000565605 ATP8B2P98198 1209 aa11.92□□□□□ -0.5
CNOT1-207ENST00000565605 G3BP1Q13283 466 aaKnown RBP eCLIP11.92□□□□□ -0.52e-6■■■□□ 16.2
CNOT1-207ENST00000565605 PDE3AQ14432 1141 aa11.92□□□□□ -0.5
CNOT1-207ENST00000565605 NBPF9Q3BBW0 867 aa11.92□□□□□ -0.5
CNOT1-207ENST00000565605 TDRD7Q8NHU6 1098 aaKnown RBP11.92□□□□□ -0.5
CNOT1-207ENST00000565605 FAM84BQ96KN1 310 aaPredicted RBP11.92□□□□□ -0.5
CNOT1-207ENST00000565605 MXD3Q9BW11 206 aa11.92□□□□□ -0.5
CNOT1-207ENST00000565605 HDAC9Q9UKV0 1011 aa11.92□□□□□ -0.5
CNOT1-207ENST00000565605 SASH1O94885 1247 aa11.91□□□□□ -0.5
CNOT1-207ENST00000565605 FGFR2P21802 821 aa11.91□□□□□ -0.5
CNOT1-207ENST00000565605 FKBP1AP62942 108 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms