RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 NLRP12P59046 1061 aa7.49□□□□□ -1.21
CHD9-210ENST00000564582 GSTM4Q03013 218 aa7.49□□□□□ -1.21
CHD9-210ENST00000564582 HP1BP3Q5SSJ5 553 aaPredicted RBP7.49□□□□□ -1.21
CHD9-210ENST00000564582 ACAD11Q709F0 780 aa7.49□□□□□ -1.21
CHD9-210ENST00000564582 SPOCK3Q9BQ16 436 aa7.49□□□□□ -1.21
CHD9-210ENST00000564582 FAM8A1Q9UBU6 413 aa7.49□□□□□ -1.21
CHD9-210ENST00000564582 VPS8Q8N3P4 1428 aa7.49□□□□□ -1.21
CHD9-210ENST00000564582 F8W735 103 aaPredicted RBP7.48□□□□□ -1.21
CHD9-210ENST00000564582 B3GALT4O96024 378 aa7.48□□□□□ -1.21
CHD9-210ENST00000564582 ITGB2P05107 769 aa7.48□□□□□ -1.21
CHD9-210ENST00000564582 CYP11A1P05108 521 aa7.48□□□□□ -1.21
CHD9-210ENST00000564582 PPP2R3AQ06190 1150 aa7.48□□□□□ -1.21
CHD9-210ENST00000564582 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.48□□□□□ -1.21
CHD9-210ENST00000564582 WFDC12Q8WWY7 111 aa7.48□□□□□ -1.21
CHD9-210ENST00000564582 SETDB2Q96T68 719 aa7.48□□□□□ -1.21
CHD9-210ENST00000564582 C12orf49Q9H741 205 aa7.48□□□□□ -1.21
CHD9-210ENST00000564582 AKAP2Q9Y2D5 859 aa7.48□□□□□ -1.21
CHD9-210ENST00000564582 EIF4BP23588 611 aaKnown RBP7.47□□□□□ -1.21
CHD9-210ENST00000564582 MFAP1P55081 439 aaKnown RBP7.47□□□□□ -1.21
CHD9-210ENST00000564582 HNRNPUQ00839 825 aaKnown RBP eCLIP7.47□□□□□ -1.21
CHD9-210ENST00000564582 XPCQ01831 940 aaPredicted RBP7.47□□□□□ -1.21
CHD9-210ENST00000564582 ZNF423Q2M1K9 1284 aa7.47□□□□□ -1.21
CHD9-210ENST00000564582 FOXD4L4Q8WXT5 416 aaPredicted RBP7.47□□□□□ -1.21
CHD9-210ENST00000564582 DUSP9Q99956 384 aaKnown RBP7.47□□□□□ -1.21
CHD9-210ENST00000564582 USP26Q9BXU7 913 aa7.47□□□□□ -1.21
CHD9-210ENST00000564582 CEP41Q9BYV8 373 aa7.47□□□□□ -1.21
CHD9-210ENST00000564582 GPN3Q9UHW5 284 aaPredicted RBP7.47□□□□□ -1.21
CHD9-210ENST00000564582 PPM1HQ9ULR3 514 aa7.47□□□□□ -1.21
CHD9-210ENST00000564582 DHX57Q6P158 1386 aaKnown RBP7.46□□□□□ -1.21
CHD9-210ENST00000564582 TM4SF5O14894 197 aa7.46□□□□□ -1.22
CHD9-210ENST00000564582 DDX3YO15523 660 aaKnown RBP7.46□□□□□ -1.22
CHD9-210ENST00000564582 ADAM11O75078 769 aa7.46□□□□□ -1.22
CHD9-210ENST00000564582 PROCP04070 461 aa7.46□□□□□ -1.22
CHD9-210ENST00000564582 ANP32AP39687 249 aaKnown RBP7.46□□□□□ -1.22
CHD9-210ENST00000564582 IREB2P48200 963 aaKnown RBP7.46□□□□□ -1.22
CHD9-210ENST00000564582 AP3B2Q13367 1082 aa7.46□□□□□ -1.22
CHD9-210ENST00000564582 HGSNATQ68CP4 663 aa7.46□□□□□ -1.22
CHD9-210ENST00000564582 OSBPL7Q9BZF2 842 aa7.46□□□□□ -1.22
CHD9-210ENST00000564582 RNF208Q9H0X6 261 aa7.46□□□□□ -1.22
CHD9-210ENST00000564582 KCNK4Q9NYG8 393 aa7.46□□□□□ -1.22
CHD9-210ENST00000564582 NOP58Q9Y2X3 529 aaKnown RBP7.46□□□□□ -1.22
CHD9-210ENST00000564582 GLB1P16278 677 aa7.45□□□□□ -1.22
CHD9-210ENST00000564582 NOS3P29474 1203 aa7.45□□□□□ -1.22
CHD9-210ENST00000564582 PSMD2Q13200 908 aa7.45□□□□□ -1.22
CHD9-210ENST00000564582 ZNF326Q5BKZ1 582 aaKnown RBP7.45□□□□□ -1.22
CHD9-210ENST00000564582 FBXO33Q7Z6M2 555 aa7.45□□□□□ -1.22
CHD9-210ENST00000564582 UBASH3BQ8TF42 649 aa7.45□□□□□ -1.22
CHD9-210ENST00000564582 CORO1BQ9BR76 489 aa7.45□□□□□ -1.22
CHD9-210ENST00000564582 RUSC1Q9BVN2 902 aa7.45□□□□□ -1.22
CHD9-210ENST00000564582 CEP44Q9C0F1 390 aa7.45□□□□□ -1.22
CHD9-210ENST00000564582 TMEM39AQ9NV64 488 aa7.45□□□□□ -1.22
CHD9-210ENST00000564582 PPM1GO15355 546 aaPredicted RBP7.44□□□□□ -1.22
CHD9-210ENST00000564582 WISP1O95388 367 aa7.44□□□□□ -1.22
CHD9-210ENST00000564582 USP17L7P0C7H9 530 aa7.44□□□□□ -1.22
CHD9-210ENST00000564582 POU4F3Q15319 338 aa7.44□□□□□ -1.22
CHD9-210ENST00000564582 ANKRD34AQ69YU3 496 aa7.44□□□□□ -1.22
CHD9-210ENST00000564582 BCL2L13Q9BXK5 485 aa7.44□□□□□ -1.22
CHD9-210ENST00000564582 MRS2Q9HD23 443 aa7.44□□□□□ -1.22
CHD9-210ENST00000564582 PARP2Q9UGN5 583 aa7.44□□□□□ -1.22
CHD9-210ENST00000564582 AK5Q9Y6K8 562 aa7.44□□□□□ -1.22
CHD9-210ENST00000564582 BAZ1AQ9NRL2 1556 aaPredicted RBP7.44□□□□□ -1.22
CHD9-210ENST00000564582 KIF21BO75037 1637 aa7.44□□□□□ -1.22
CHD9-210ENST00000564582 CLIP1P30622 1438 aa7.44□□□□□ -1.22
CHD9-210ENST00000564582 LOC100289279A0A1B0GTE1 492 aa7.43□□□□□ -1.22
CHD9-210ENST00000564582 ALX3O95076 343 aa7.43□□□□□ -1.22
CHD9-210ENST00000564582 NUTM2GQ5VZR2 741 aa7.43□□□□□ -1.22
CHD9-210ENST00000564582 FDX2Q6P4F2 183 aa7.43□□□□□ -1.22
CHD9-210ENST00000564582 KIAA1211Q6ZU35 1233 aa7.43□□□□□ -1.22
CHD9-210ENST00000564582 AGGF1Q8N302 714 aaeCLIP7.43□□□□□ -1.22
CHD9-210ENST00000564582 C3orf58Q8NDZ4 430 aa7.43□□□□□ -1.22
CHD9-210ENST00000564582 CYP4F12Q9HCS2 524 aa7.43□□□□□ -1.22
CHD9-210ENST00000564582 SAMM50Q9Y512 469 aa7.43□□□□□ -1.22
CHD9-210ENST00000564582 MEGF11A6BM72 1044 aa7.42□□□□□ -1.22
CHD9-210ENST00000564582 SART1O43290 800 aaKnown RBP7.42□□□□□ -1.22
CHD9-210ENST00000564582 MAOBP27338 520 aa7.42□□□□□ -1.22
CHD9-210ENST00000564582 DAB2P98082 770 aa7.42□□□□□ -1.22
CHD9-210ENST00000564582 FAAP100Q0VG06 881 aa7.42□□□□□ -1.22
CHD9-210ENST00000564582 UVSSAQ2YD98 709 aa7.42□□□□□ -1.22
CHD9-210ENST00000564582 EXOSC6Q5RKV6 272 aaKnown RBP7.42□□□□□ -1.22
CHD9-210ENST00000564582 Q6ZS46 218 aa7.42□□□□□ -1.22
CHD9-210ENST00000564582 ANKRD24Q8TF21 1146 aa7.42□□□□□ -1.22
CHD9-210ENST00000564582 EIF4G1Q04637 1599 aaKnown RBP7.42□□□□□ -1.22
CHD9-210ENST00000564582 ZNF157P51786 506 aaPredicted RBP7.41□□□□□ -1.22
CHD9-210ENST00000564582 DOC2BQ14184 412 aa7.41□□□□□ -1.22
CHD9-210ENST00000564582 TPTE2Q6XPS3 522 aa7.41□□□□□ -1.22
CHD9-210ENST00000564582 TMC4Q7Z404 712 aa7.41□□□□□ -1.22
CHD9-210ENST00000564582 DZIP1LQ8IYY4 767 aaKnown RBP7.41□□□□□ -1.22
CHD9-210ENST00000564582 TP53INP1Q96A56 240 aa7.41□□□□□ -1.22
CHD9-210ENST00000564582 TRIM56Q9BRZ2 755 aaKnown RBP7.41□□□□□ -1.22
CHD9-210ENST00000564582 EMILIN2Q9BXX0 1053 aa7.41□□□□□ -1.22
CHD9-210ENST00000564582 NRSN2Q9GZP1 204 aa7.41□□□□□ -1.22
CHD9-210ENST00000564582 TPSG1Q9NRR2 321 aa7.41□□□□□ -1.22
CHD9-210ENST00000564582 TTF2Q9UNY4 1162 aaKnown RBP7.41□□□□□ -1.22
CHD9-210ENST00000564582 RRBP1Q9P2E9 1410 aaKnown RBP7.41□□□□□ -1.22
CHD9-210ENST00000564582 SORBS3O60504 671 aa7.4□□□□□ -1.22
CHD9-210ENST00000564582 GIPC2Q8TF65 315 aa7.4□□□□□ -1.22
CHD9-210ENST00000564582 MEGF10Q96KG7 1140 aa7.4□□□□□ -1.22
CHD9-210ENST00000564582 IPO9Q96P70 1041 aaKnown RBP7.4□□□□□ -1.22
CHD9-210ENST00000564582 NECAB3Q96P71 396 aaPredicted RBP7.4□□□□□ -1.22
CHD9-210ENST00000564582 TMPRSS13Q9BYE2 586 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms