RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 SPDYE2Q495Y8 402 aa18.37■□□□□ 0.53
SNX29-203ENST00000564111 SIL1Q9H173 461 aa18.37■□□□□ 0.53
SNX29-203ENST00000564111 CHMP4BQ9H444 224 aaKnown RBP18.37■□□□□ 0.53
SNX29-203ENST00000564111 FAM155AB1AL88 458 aaPredicted RBP18.36■□□□□ 0.53
SNX29-203ENST00000564111 PPP1R12BO60237 982 aaPredicted RBP18.36■□□□□ 0.53
SNX29-203ENST00000564111 RASAL3Q86YV0 1011 aa18.36■□□□□ 0.53
SNX29-203ENST00000564111 DEFB129Q9H1M3 183 aa18.36■□□□□ 0.53
SNX29-203ENST00000564111 BCAMP50895 628 aa18.35■□□□□ 0.53
SNX29-203ENST00000564111 MVPQ14764 893 aaKnown RBP18.35■□□□□ 0.53
SNX29-203ENST00000564111 MAP3K11Q16584 847 aa18.35■□□□□ 0.53
SNX29-203ENST00000564111 FKBP1CQ5VVH2 108 aa18.35■□□□□ 0.53
SNX29-203ENST00000564111 HHIPL2Q6UWX4 724 aa18.35■□□□□ 0.53
SNX29-203ENST00000564111 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
SNX29-203ENST00000564111 VEZTQ9HBM0 779 aa18.34■□□□□ 0.53
SNX29-203ENST00000564111 RPAP1Q9BWH6 1393 aaPredicted RBP18.34■□□□□ 0.53
SNX29-203ENST00000564111 G3BP1Q13283 466 aaKnown RBP eCLIP18.34■□□□□ 0.53
SNX29-203ENST00000564111 SLF2Q8IX21 1173 aa18.34■□□□□ 0.53
SNX29-203ENST00000564111 ZDHHC15Q96MV8 337 aa18.34■□□□□ 0.53
SNX29-203ENST00000564111 ZNF70Q9UC06 446 aaPredicted RBP18.34■□□□□ 0.53
SNX29-203ENST00000564111 IREB2P48200 963 aaKnown RBP18.33■□□□□ 0.53
SNX29-203ENST00000564111 CLUAP1Q96AJ1 413 aa18.33■□□□□ 0.53
SNX29-203ENST00000564111 PRMT6Q96LA8 375 aaPredicted RBP18.33■□□□□ 0.53
SNX29-203ENST00000564111 JAG2Q9Y219 1238 aa18.33■□□□□ 0.53
SNX29-203ENST00000564111 IGSF3O75054 1194 aa18.33■□□□□ 0.52
SNX29-203ENST00000564111 LBX1P52954 281 aa18.33■□□□□ 0.52
SNX29-203ENST00000564111 SREBF2Q12772 1141 aa18.33■□□□□ 0.52
SNX29-203ENST00000564111 SPTY2D1Q68D10 685 aaPredicted RBP18.33■□□□□ 0.52
SNX29-203ENST00000564111 KIF23Q02241 960 aaPredicted RBP18.32■□□□□ 0.52
SNX29-203ENST00000564111 CLRN2A0PK11 232 aa18.31■□□□□ 0.52
SNX29-203ENST00000564111 LDLRAD1Q5T700 205 aa18.31■□□□□ 0.52
SNX29-203ENST00000564111 DLK2Q6UY11 383 aa18.31■□□□□ 0.52
SNX29-203ENST00000564111 ITPRIPQ8IWB1 547 aa18.31■□□□□ 0.52
SNX29-203ENST00000564111 GPR108Q9NPR9 543 aa18.31■□□□□ 0.52
SNX29-203ENST00000564111 PA2G4Q9UQ80 394 aaKnown RBP18.31■□□□□ 0.52
SNX29-203ENST00000564111 FAM83AQ86UY5 434 aa18.31■□□□□ 0.52
SNX29-203ENST00000564111 IQSEC3Q9UPP2 1182 aaPredicted RBP18.31■□□□□ 0.52
SNX29-203ENST00000564111 MAST2Q6P0Q8 1798 aa18.3■□□□□ 0.52
SNX29-203ENST00000564111 LDHBP07195 334 aaKnown RBP18.3■□□□□ 0.52
SNX29-203ENST00000564111 ANGEL1Q9UNK9 670 aaKnown RBP18.3■□□□□ 0.52
SNX29-203ENST00000564111 UBE2Q2LH0YL09 131 aa18.3■□□□□ 0.52
SNX29-203ENST00000564111 POLA2Q14181 598 aa18.3■□□□□ 0.52
SNX29-203ENST00000564111 RASA3Q14644 834 aa18.3■□□□□ 0.52
SNX29-203ENST00000564111 UQCRFS1P1P0C7P4 283 aa18.29■□□□□ 0.52
SNX29-203ENST00000564111 ATP8B2P98198 1209 aa18.29■□□□□ 0.52
SNX29-203ENST00000564111 SSH3Q8TE77 659 aa18.29■□□□□ 0.52
SNX29-203ENST00000564111 SSC5DA1L4H1 1573 aa18.29■□□□□ 0.52
SNX29-203ENST00000564111 OTOFQ9HC10 1997 aa18.29■□□□□ 0.52
SNX29-203ENST00000564111 A0A1B0GUL7 405 aa18.29■□□□□ 0.52
SNX29-203ENST00000564111 ZBTB48P10074 688 aaPredicted RBP18.29■□□□□ 0.52
SNX29-203ENST00000564111 INHBEP58166 350 aa18.29■□□□□ 0.52
SNX29-203ENST00000564111 GORABQ5T7V8 394 aa18.29■□□□□ 0.52
SNX29-203ENST00000564111 CCDC102BQ68D86 513 aa18.29■□□□□ 0.52
SNX29-203ENST00000564111 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.29■□□□□ 0.52
SNX29-203ENST00000564111 TDRD3Q9H7E2 651 aaKnown RBP18.29■□□□□ 0.52
SNX29-203ENST00000564111 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
SNX29-203ENST00000564111 TFCP2Q12800 502 aa18.28■□□□□ 0.52
SNX29-203ENST00000564111 MYH2Q9UKX2 1941 aa18.28■□□□□ 0.52
SNX29-203ENST00000564111 ALDH1A1P00352 501 aa18.27■□□□□ 0.52
SNX29-203ENST00000564111 OS9Q13438 667 aaPredicted RBP18.27■□□□□ 0.52
SNX29-203ENST00000564111 DCAF15Q66K64 600 aa18.27■□□□□ 0.52
SNX29-203ENST00000564111 ANKRD13AQ8IZ07 590 aa18.27■□□□□ 0.52
SNX29-203ENST00000564111 MANSC4A6NHS7 340 aaPredicted RBP18.27■□□□□ 0.52
SNX29-203ENST00000564111 PHKA1P46020 1223 aa18.27■□□□□ 0.52
SNX29-203ENST00000564111 HSP90AB4PQ58FF6 505 aa18.27■□□□□ 0.52
SNX29-203ENST00000564111 PRAMEF18Q5VWM3 479 aa18.27■□□□□ 0.52
SNX29-203ENST00000564111 ERC1Q8IUD2 1116 aa18.27■□□□□ 0.52
SNX29-203ENST00000564111 SLC10A4Q96EP9 437 aa18.27■□□□□ 0.52
SNX29-203ENST00000564111 XAGE2Q96GT9 111 aa18.27■□□□□ 0.52
SNX29-203ENST00000564111 TNNQ9UQP3 1299 aa18.27■□□□□ 0.52
SNX29-203ENST00000564111 GSTO1P78417 241 aa18.26■□□□□ 0.51
SNX29-203ENST00000564111 ZBTB7BO15156 539 aaPredicted RBP18.26■□□□□ 0.51
SNX29-203ENST00000564111 TM4SF4P48230 202 aa18.26■□□□□ 0.51
SNX29-203ENST00000564111 NOM1Q5C9Z4 860 aaKnown RBP18.26■□□□□ 0.51
SNX29-203ENST00000564111 DDX19BQ9UMR2 479 aa18.26■□□□□ 0.51
SNX29-203ENST00000564111 PCDHAC2Q9Y5I4 1007 aa18.26■□□□□ 0.51
SNX29-203ENST00000564111 DOCK2Q92608 1830 aa18.26■□□□□ 0.51
SNX29-203ENST00000564111 SPRYD7Q5W111 196 aa18.25■□□□□ 0.51
SNX29-203ENST00000564111 DZIP1Q86YF9 867 aaKnown RBP18.25■□□□□ 0.51
SNX29-203ENST00000564111 CSRNP1Q96S65 589 aa18.25■□□□□ 0.51
SNX29-203ENST00000564111 RNF186Q9NXI6 227 aa18.25■□□□□ 0.51
SNX29-203ENST00000564111 NOP58Q9Y2X3 529 aaKnown RBP18.25■□□□□ 0.51
SNX29-203ENST00000564111 PNMA6EA0A0J9YXQ4 647 aa18.25■□□□□ 0.51
SNX29-203ENST00000564111 TCP10L2B9ZVM9 353 aa18.25■□□□□ 0.51
SNX29-203ENST00000564111 CAPN15O75808 1086 aa18.25■□□□□ 0.51
SNX29-203ENST00000564111 ARID4AP29374 1257 aaPredicted RBP18.25■□□□□ 0.51
SNX29-203ENST00000564111 CFHR5Q9BXR6 569 aa18.25■□□□□ 0.51
SNX29-203ENST00000564111 SCAF8Q9UPN6 1271 aaKnown RBP18.25■□□□□ 0.51
SNX29-203ENST00000564111 ADORA1P30542 326 aa18.24■□□□□ 0.51
SNX29-203ENST00000564111 NBPF12Q5TAG4 269 aaPredicted RBP18.24■□□□□ 0.51
SNX29-203ENST00000564111 APOBEC3HQ6NTF7 200 aaKnown RBP18.24■□□□□ 0.51
SNX29-203ENST00000564111 MOB2Q70IA6 237 aa18.24■□□□□ 0.51
SNX29-203ENST00000564111 WNK4Q96J92 1243 aa18.24■□□□□ 0.51
SNX29-203ENST00000564111 NEUROD6Q96NK8 337 aa18.24■□□□□ 0.51
SNX29-203ENST00000564111 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
SNX29-203ENST00000564111 HMMRO75330 724 aa18.23■□□□□ 0.51
SNX29-203ENST00000564111 LDHCP07864 332 aa18.23■□□□□ 0.51
SNX29-203ENST00000564111 RASGRF1Q13972 1273 aa18.23■□□□□ 0.51
SNX29-203ENST00000564111 OTUD7BQ6GQQ9 843 aa18.23■□□□□ 0.51
SNX29-203ENST00000564111 DAGLAQ9Y4D2 1042 aa18.23■□□□□ 0.51
SNX29-203ENST00000564111 CSADQ9Y600 493 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms