RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 OPTNQ96CV9 577 aa26.27■■□□□ 1.8
HERC2-204ENST00000563945 BICC1Q9H694 974 aaKnown RBP26.27■■□□□ 1.8
HERC2-204ENST00000563945 IQSEC3Q9UPP2 1182 aaPredicted RBP26.27■■□□□ 1.8
HERC2-204ENST00000563945 CRHR2Q13324 411 aa26.26■■□□□ 1.79
HERC2-204ENST00000563945 KAZALD1Q96I82 304 aa26.26■■□□□ 1.79
HERC2-204ENST00000563945 CSADQ9Y600 493 aa26.26■■□□□ 1.79
HERC2-204ENST00000563945 GJA5P36382 358 aa26.25■■□□□ 1.79
HERC2-204ENST00000563945 MAP3K9P80192 1104 aa26.25■■□□□ 1.79
HERC2-204ENST00000563945 FBXO33Q7Z6M2 555 aa26.25■■□□□ 1.79
HERC2-204ENST00000563945 EFCC1Q9HA90 598 aa26.25■■□□□ 1.79
HERC2-204ENST00000563945 TMOD2Q9NZR1 351 aa26.25■■□□□ 1.79
HERC2-204ENST00000563945 UTYO14607 1347 aa26.24■■□□□ 1.79
HERC2-204ENST00000563945 WDHD1O75717 1129 aaPredicted RBP26.24■■□□□ 1.79
HERC2-204ENST00000563945 SP3Q02447 781 aa26.24■■□□□ 1.79
HERC2-204ENST00000563945 ARHGEF6Q15052 776 aa26.24■■□□□ 1.79
HERC2-204ENST00000563945 CD99L2Q8TCZ2 262 aa26.24■■□□□ 1.79
HERC2-204ENST00000563945 TEKT1Q969V4 418 aa26.24■■□□□ 1.79
HERC2-204ENST00000563945 TMEM39BQ9GZU3 492 aa26.24■■□□□ 1.79
HERC2-204ENST00000563945 TESPA1A2RU30 521 aaPredicted RBP26.23■■□□□ 1.79
HERC2-204ENST00000563945 HDLBPQ00341 1268 aaKnown RBP26.23■■□□□ 1.79
HERC2-204ENST00000563945 PDE8BO95263 885 aa26.22■■□□□ 1.79
HERC2-204ENST00000563945 GTF2A2P52657 109 aa26.22■■□□□ 1.79
HERC2-204ENST00000563945 RABL6Q3YEC7 729 aaPredicted RBP26.22■■□□□ 1.79
HERC2-204ENST00000563945 LRRC24Q50LG9 513 aa26.22■■□□□ 1.79
HERC2-204ENST00000563945 TEPSINQ96N21 525 aa26.22■■□□□ 1.79
HERC2-204ENST00000563945 PCDH10Q9P2E7 1040 aa26.22■■□□□ 1.79
HERC2-204ENST00000563945 PTPRCP08575 1304 aa26.21■■□□□ 1.79
HERC2-204ENST00000563945 MRPL50Q8N5N7 158 aaKnown RBP26.21■■□□□ 1.79
HERC2-204ENST00000563945 HOOK2Q96ED9 719 aa26.21■■□□□ 1.79
HERC2-204ENST00000563945 PTPN18Q99952 460 aa26.21■■□□□ 1.79
HERC2-204ENST00000563945 ZFYVE28Q9HCC9 887 aa26.21■■□□□ 1.79
HERC2-204ENST00000563945 PTPN22Q9Y2R2 807 aa26.21■■□□□ 1.79
HERC2-204ENST00000563945 CCL15-CCL14A0A0B4J2E2 113 aa26.2■■□□□ 1.78
HERC2-204ENST00000563945 IFIT1P09914 478 aaKnown RBP26.2■■□□□ 1.78
HERC2-204ENST00000563945 TAF1CQ15572 869 aaPredicted RBP26.2■■□□□ 1.78
HERC2-204ENST00000563945 CCL15Q16663 113 aa26.2■■□□□ 1.78
HERC2-204ENST00000563945 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.2■■□□□ 1.78
HERC2-204ENST00000563945 MAST3O60307 1309 aa26.19■■□□□ 1.78
HERC2-204ENST00000563945 VGLL4Q14135 290 aa26.19■■□□□ 1.78
HERC2-204ENST00000563945 ANKRD44Q8N8A2 993 aa26.19■■□□□ 1.78
HERC2-204ENST00000563945 OTUD5Q96G74 571 aa26.19■■□□□ 1.78
HERC2-204ENST00000563945 BCAMP50895 628 aa26.18■■□□□ 1.78
HERC2-204ENST00000563945 GRIK5Q16478 980 aa26.18■■□□□ 1.78
HERC2-204ENST00000563945 CDAN1Q8IWY9 1227 aa26.18■■□□□ 1.78
HERC2-204ENST00000563945 MS4A4AQ96JQ5 239 aa26.18■■□□□ 1.78
HERC2-204ENST00000563945 MRIQ9BWK5 157 aa26.18■■□□□ 1.78
HERC2-204ENST00000563945 CACNB3P54284 484 aa26.17■■□□□ 1.78
HERC2-204ENST00000563945 PUM3Q15397 648 aaKnown RBP26.17■■□□□ 1.78
HERC2-204ENST00000563945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.17■■□□□ 1.78
HERC2-204ENST00000563945 CNKSR2Q8WXI2 1034 aa26.17■■□□□ 1.78
HERC2-204ENST00000563945 SUGT1Q9Y2Z0 365 aa26.17■■□□□ 1.78
HERC2-204ENST00000563945 E9PSI1 815 aa26.16■■□□□ 1.78
HERC2-204ENST00000563945 KLHDC4Q8TBB5 520 aa26.16■■□□□ 1.78
HERC2-204ENST00000563945 BRI3BPQ8WY22 251 aa26.16■■□□□ 1.78
HERC2-204ENST00000563945 ZDHHC15Q96MV8 337 aa26.16■■□□□ 1.78
HERC2-204ENST00000563945 SLC5A1P13866 664 aa26.15■■□□□ 1.78
HERC2-204ENST00000563945 FAM83AQ86UY5 434 aa26.15■■□□□ 1.78
HERC2-204ENST00000563945 VGLL2Q8N8G2 317 aa26.15■■□□□ 1.78
HERC2-204ENST00000563945 CETPP11597 493 aa26.14■■□□□ 1.78
HERC2-204ENST00000563945 FKBP1CQ5VVH2 108 aa26.14■■□□□ 1.78
HERC2-204ENST00000563945 DCAF15Q66K64 600 aa26.14■■□□□ 1.78
HERC2-204ENST00000563945 ERO1BQ86YB8 467 aa26.14■■□□□ 1.78
HERC2-204ENST00000563945 SSH1Q8WYL5 1049 aa26.14■■□□□ 1.78
HERC2-204ENST00000563945 GCC1Q96CN9 775 aa26.14■■□□□ 1.78
HERC2-204ENST00000563945 WRNIP1Q96S55 665 aa26.14■■□□□ 1.78
HERC2-204ENST00000563945 TMEM106CQ9BVX2 250 aa26.14■■□□□ 1.78
HERC2-204ENST00000563945 USP44Q9H0E7 712 aa26.14■■□□□ 1.78
HERC2-204ENST00000563945 ZNF521Q96K83 1311 aa26.14■■□□□ 1.77
HERC2-204ENST00000563945 POTEFA5A3E0 1075 aa26.13■■□□□ 1.77
HERC2-204ENST00000563945 KIF22Q14807 665 aa26.13■■□□□ 1.77
HERC2-204ENST00000563945 NBPF11Q86T75 865 aa26.13■■□□□ 1.77
HERC2-204ENST00000563945 WDR66Q8TBY9 1149 aa26.13■■□□□ 1.77
HERC2-204ENST00000563945 KIF16BQ96L93 1317 aa26.13■■□□□ 1.77
HERC2-204ENST00000563945 ARAP2Q8WZ64 1704 aa26.12■■□□□ 1.77
HERC2-204ENST00000563945 SPDYE5A6NIY4 337 aa26.12■■□□□ 1.77
HERC2-204ENST00000563945 HHIPL2Q6UWX4 724 aa26.12■■□□□ 1.77
HERC2-204ENST00000563945 ARMC5Q96C12 935 aa26.12■■□□□ 1.77
HERC2-204ENST00000563945 LAMB1P07942 1786 aa26.11■■□□□ 1.77
HERC2-204ENST00000563945 EYA2O00167 538 aa26.11■■□□□ 1.77
HERC2-204ENST00000563945 SNAPC2Q13487 334 aa26.11■■□□□ 1.77
HERC2-204ENST00000563945 APOBEC3HQ6NTF7 200 aaKnown RBP26.11■■□□□ 1.77
HERC2-204ENST00000563945 LPIN2Q92539 896 aa26.11■■□□□ 1.77
HERC2-204ENST00000563945 OTOFQ9HC10 1997 aa26.1■■□□□ 1.77
HERC2-204ENST00000563945 FAM43AQ8N2R8 423 aa26.1■■□□□ 1.77
HERC2-204ENST00000563945 ZKSCAN4Q969J2 545 aaPredicted RBP26.1■■□□□ 1.77
HERC2-204ENST00000563945 ZNF341Q9BYN7 854 aa26.1■■□□□ 1.77
HERC2-204ENST00000563945 FGFR2P21802 821 aa26.09■■□□□ 1.77
HERC2-204ENST00000563945 SLC9C1Q4G0N8 1177 aa26.09■■□□□ 1.77
HERC2-204ENST00000563945 GNL3LQ9NVN8 582 aaKnown RBP26.09■■□□□ 1.77
HERC2-204ENST00000563945 SNCAIPQ9Y6H5 919 aa26.09■■□□□ 1.77
HERC2-204ENST00000563945 ZCCHC17Q9NP64 241 aaKnown RBP26.08■■□□□ 1.77
HERC2-204ENST00000563945 SMC4Q9NTJ3 1288 aa26.08■■□□□ 1.77
HERC2-204ENST00000563945 HDAC5Q9UQL6 1122 aa26.08■■□□□ 1.77
HERC2-204ENST00000563945 KIAA0100Q14667 2235 aaKnown RBP26.08■■□□□ 1.77
HERC2-204ENST00000563945 PPIL2Q13356 520 aa26.07■■□□□ 1.76
HERC2-204ENST00000563945 SLC4A8Q2Y0W8 1093 aa26.07■■□□□ 1.76
HERC2-204ENST00000563945 ALDH1L2Q3SY69 923 aa26.07■■□□□ 1.76
HERC2-204ENST00000563945 MIGA2Q7L4E1 593 aa26.07■■□□□ 1.76
HERC2-204ENST00000563945 CEP126Q9P2H0 1117 aa26.07■■□□□ 1.76
HERC2-204ENST00000563945 IRF6O14896 467 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms