RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ABCC6O95255 1503 aa16.21■□□□□ 0.18
GTF3C1-203ENST00000562609 AFDNP55196 1824 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 SMC2O95347 1197 aa16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 RFX5P48382 616 aaPredicted RBP16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 ARMCX5Q6P1M9 558 aa16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 DHX40Q8IX18 779 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 DNAJC10Q8IXB1 793 aa16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 CNPY4Q8N129 248 aa16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 ZSCAN31Q96LW9 406 aaPredicted RBP16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 GLI3P10071 1580 aa16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 PARP4Q9UKK3 1724 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 ADAMTS2O95450 1211 aa16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 SFPQP23246 707 aaKnown RBP eCLIP16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 CORO7P57737 925 aa16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 MCTP2Q6DN12 878 aa16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 SUGP1Q8IWZ8 645 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 DONSONQ9NYP3 566 aa16.2■□□□□ 0.18
GTF3C1-203ENST00000562609 USP42Q9H9J4 1324 aaKnown RBP16.19■□□□□ 0.18
GTF3C1-203ENST00000562609 ZNF594Q96JF6 807 aaPredicted RBP16.19■□□□□ 0.18
GTF3C1-203ENST00000562609 JAKMIP1Q96N16 626 aaKnown RBP16.19■□□□□ 0.18
GTF3C1-203ENST00000562609 CASP7P55210 303 aa16.19■□□□□ 0.18
GTF3C1-203ENST00000562609 GPR161Q8N6U8 529 aaKnown RBP16.19■□□□□ 0.18
GTF3C1-203ENST00000562609 ABCA3Q99758 1704 aa16.19■□□□□ 0.18
GTF3C1-203ENST00000562609 FANCGO15287 622 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 GSCP56915 257 aaPredicted RBP16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 AOPEPQ8N6M6 819 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 CCDC150Q8NCX0 1101 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 FBXW7Q969H0 707 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 PARD6BQ9BYG5 372 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 IMPACTQ9P2X3 320 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 DBNLQ9UJU6 430 aaKnown RBP16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 SWT1Q5T5J6 900 aaKnown RBP16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 VPS53Q5VIR6 699 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 MMS22LQ6ZRQ5 1243 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 TMC6Q7Z403 805 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 ZSCAN16Q9H4T2 348 aaPredicted RBP16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 LONRF2Q1L5Z9 754 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 ADCK5Q3MIX3 580 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 FSD1Q9BTV5 496 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 COPRSQ9NQ92 184 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 CWC25Q9NXE8 425 aaPredicted RBP16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 PARP3Q9Y6F1 533 aa16.18■□□□□ 0.18
GTF3C1-203ENST00000562609 NRDCO43847 1150 aa16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 PDCP20941 246 aa16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 FOXO4P98177 505 aa16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 NMIQ13287 307 aaPredicted RBP16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 COL9A3Q14050 684 aaPredicted RBP16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 PRPF40BQ6NWY9 871 aaKnown RBP16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 TRIM65Q6PJ69 517 aa16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 EVI5LQ96CN4 794 aa16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 DBNDD2Q9BQY9 259 aa16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 SUFUQ9UMX1 484 aa16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 KCPQ6ZWJ8 1503 aa16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 CYP46A1Q9Y6A2 500 aa16.17■□□□□ 0.18
GTF3C1-203ENST00000562609 A0A0D9SFI3 127 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 RABL6Q3YEC7 729 aaPredicted RBP16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 TNNI3KQ59H18 835 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 NEUROD6Q96NK8 337 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 PDE11AQ9HCR9 933 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 FPGT-TNNI3KV9GXZ4 949 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 SHANK3Q9BYB0 1731 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 H7C1W4 665 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 RPS6KA5O75582 802 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 MAP2K2P36507 400 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 KCNJ6P48051 423 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 TIMM10P62072 90 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 FAM177A1Q8N128 213 aaPredicted RBP16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 BCCIPQ9P287 314 aaKnown RBP eCLIP16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 TPCN1Q9ULQ1 816 aa16.16■□□□□ 0.18
GTF3C1-203ENST00000562609 MCM6Q14566 821 aa16.15■□□□□ 0.18
GTF3C1-203ENST00000562609 ANKRD20A12PQ8NF67 263 aa16.15■□□□□ 0.18
GTF3C1-203ENST00000562609 LRRC24Q50LG9 513 aa16.15■□□□□ 0.18
GTF3C1-203ENST00000562609 DNAJC21Q5F1R6 531 aaKnown RBP16.15■□□□□ 0.18
GTF3C1-203ENST00000562609 FAM89AQ96GI7 184 aa16.15■□□□□ 0.18
GTF3C1-203ENST00000562609 XPO4Q9C0E2 1151 aaKnown RBP16.15■□□□□ 0.18
GTF3C1-203ENST00000562609 ANO10Q9NW15 660 aa16.15■□□□□ 0.18
GTF3C1-203ENST00000562609 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
GTF3C1-203ENST00000562609 GPTP24298 496 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 CEP57L1Q8IYX8 460 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 CEP89Q96ST8 783 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 NUTM2BA6NNL0 878 aaPredicted RBP16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 NUTM2EB1AL46 878 aaPredicted RBP16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 APOBRQ0VD83 1088 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 NUTM2AQ8IVF1 878 aaPredicted RBP16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 SLC4A9Q96Q91 983 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 PUS3Q9BZE2 481 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 PLEKHA4Q9H4M7 779 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 NHSL1Q5SYE7 1610 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 TOGARAM1Q9Y4F4 1720 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 MAP2K7O14733 419 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 CCP110O43303 1012 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 RUFY2Q8WXA3 655 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 ERCC4Q92889 916 aaPredicted RBP16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 IFNKQ9P0W0 207 aa16.14■□□□□ 0.17
GTF3C1-203ENST00000562609 CPP00450 1065 aa16.13■□□□□ 0.17
GTF3C1-203ENST00000562609 CEBPZQ03701 1054 aaKnown RBP16.13■□□□□ 0.17
GTF3C1-203ENST00000562609 PPP2R3AQ06190 1150 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms