RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZNF333Q96JL9 665 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 NLRP3Q96P20 1036 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 DBNDD1Q9H9R9 158 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 SLC24A3Q9HC58 644 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 PRDM9Q9NQV7 894 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 FCF1Q9Y324 198 aaKnown RBP7.15□□□□□ -1.26
HERC1-213ENST00000561359 RIC1Q4ADV7 1423 aa7.15□□□□□ -1.27
HERC1-213ENST00000561359 PAPPA2Q9BXP8 1791 aa7.15□□□□□ -1.27
HERC1-213ENST00000561359 BTBD11A6QL63 1104 aa7.14□□□□□ -1.27
HERC1-213ENST00000561359 SOX1O00570 391 aaPredicted RBP7.14□□□□□ -1.27
HERC1-213ENST00000561359 ABCC4O15439 1325 aa7.14□□□□□ -1.27
HERC1-213ENST00000561359 BBOX1O75936 387 aa7.14□□□□□ -1.27
HERC1-213ENST00000561359 SNRPA1P09661 255 aaKnown RBP7.14□□□□□ -1.27
HERC1-213ENST00000561359 POLR2AP24928 1970 aaKnown RBP7.14□□□□□ -1.27
HERC1-213ENST00000561359 SCARF1Q14162 830 aa7.14□□□□□ -1.27
HERC1-213ENST00000561359 MSS51Q4VC12 460 aa7.14□□□□□ -1.27
HERC1-213ENST00000561359 NBPF10Q6P3W6 841 aaKnown RBP7.14□□□□□ -1.27
HERC1-213ENST00000561359 MORC1Q86VD1 984 aa7.14□□□□□ -1.27
HERC1-213ENST00000561359 UBR2Q8IWV8 1755 aa7.14□□□□□ -1.27
HERC1-213ENST00000561359 PARP9Q8IXQ6 854 aa7.14□□□□□ -1.27
HERC1-213ENST00000561359 SP8Q8IXZ3 490 aa7.14□□□□□ -1.27
HERC1-213ENST00000561359 IL17REQ8NFR9 667 aa7.14□□□□□ -1.27
HERC1-213ENST00000561359 USB1Q9BQ65 265 aaKnown RBP7.14□□□□□ -1.27
HERC1-213ENST00000561359 GNAT3A8MTJ3 354 aa7.13□□□□□ -1.27
HERC1-213ENST00000561359 NF2P35240 595 aa7.13□□□□□ -1.27
HERC1-213ENST00000561359 WASHC4Q2M389 1173 aa7.13□□□□□ -1.27
HERC1-213ENST00000561359 PRAMEF18Q5VWM3 479 aa7.13□□□□□ -1.27
HERC1-213ENST00000561359 SUSD4Q5VX71 490 aa7.13□□□□□ -1.27
HERC1-213ENST00000561359 SPRYD7Q5W111 196 aa7.13□□□□□ -1.27
HERC1-213ENST00000561359 LIAT1Q6ZQX7 453 aa7.13□□□□□ -1.27
HERC1-213ENST00000561359 DEFB123Q8N688 67 aa7.13□□□□□ -1.27
HERC1-213ENST00000561359 PRDM6Q9NQX0 595 aa7.13□□□□□ -1.27
HERC1-213ENST00000561359 KCNQ5Q9NR82 932 aa7.13□□□□□ -1.27
HERC1-213ENST00000561359 SCAF8Q9UPN6 1271 aaKnown RBP7.13□□□□□ -1.27
HERC1-213ENST00000561359 NR2E3Q9Y5X4 410 aa7.13□□□□□ -1.27
HERC1-213ENST00000561359 A0A1W2PPC1 479 aa7.12□□□□□ -1.27
HERC1-213ENST00000561359 WTIPA6NIX2 430 aaPredicted RBP7.12□□□□□ -1.27
HERC1-213ENST00000561359 ERVV-1B6SEH8 477 aa7.12□□□□□ -1.27
HERC1-213ENST00000561359 ZBTB24O43167 697 aaPredicted RBP7.12□□□□□ -1.27
HERC1-213ENST00000561359 ECE2O60344 883 aa7.12□□□□□ -1.27
HERC1-213ENST00000561359 FDX1P10109 184 aa7.12□□□□□ -1.27
HERC1-213ENST00000561359 PTPN12Q05209 780 aaKnown RBP7.12□□□□□ -1.27
HERC1-213ENST00000561359 PDE4DQ08499 809 aa7.12□□□□□ -1.27
HERC1-213ENST00000561359 PLA2G2CQ5R387 149 aa7.12□□□□□ -1.27
HERC1-213ENST00000561359 ZNF697Q5TEC3 545 aa7.12□□□□□ -1.27
HERC1-213ENST00000561359 ZNF598Q86UK7 904 aaKnown RBP7.12□□□□□ -1.27
HERC1-213ENST00000561359 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.12□□□□□ -1.27
HERC1-213ENST00000561359 SPIRE2Q8WWL2 714 aa7.12□□□□□ -1.27
HERC1-213ENST00000561359 EMID1Q96A84 441 aaPredicted RBP7.12□□□□□ -1.27
HERC1-213ENST00000561359 PRO3102Q9H379 93 aa7.12□□□□□ -1.27
HERC1-213ENST00000561359 STXBP5LQ9Y2K9 1186 aa7.12□□□□□ -1.27
HERC1-213ENST00000561359 MAP3K15Q6ZN16 1313 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 UBN2Q6ZU65 1347 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 MANSC4A6NHS7 340 aaPredicted RBP7.11□□□□□ -1.27
HERC1-213ENST00000561359 C6orf229H3BNL8 230 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 NRG2O14511 850 aaPredicted RBP7.11□□□□□ -1.27
HERC1-213ENST00000561359 NTSR2O95665 410 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 INHBEP58166 350 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 SP3Q02447 781 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 PRKG1Q13976 671 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 ARHGEF6Q15052 776 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 KIF6Q6ZMV9 814 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 DDX46Q7L014 1031 aaKnown RBP7.11□□□□□ -1.27
HERC1-213ENST00000561359 Q7L0L9 218 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 ARMC9Q7Z3E5 817 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 PPP1R42Q7Z4L9 355 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 GAS2L2Q8NHY3 880 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 SYMPKQ92797 1274 aaKnown RBP7.11□□□□□ -1.27
HERC1-213ENST00000561359 HTATIP2Q9BUP3 242 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 PTCH2Q9Y6C5 1203 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 TTC28Q96AY4 2481 aa7.11□□□□□ -1.27
HERC1-213ENST00000561359 ZNF609O15014 1411 aa7.1□□□□□ -1.27
HERC1-213ENST00000561359 RBBP6Q7Z6E9 1792 aaKnown RBP7.1□□□□□ -1.27
HERC1-213ENST00000561359 RTL9Q8NET4 1388 aa7.1□□□□□ -1.27
HERC1-213ENST00000561359 IBTKQ9P2D0 1353 aaPredicted RBP7.1□□□□□ -1.27
HERC1-213ENST00000561359 CD2BP2O95400 341 aaKnown RBP7.1□□□□□ -1.27
HERC1-213ENST00000561359 VIL1P09327 827 aaKnown RBP7.1□□□□□ -1.27
HERC1-213ENST00000561359 NDUFV2P19404 249 aa7.1□□□□□ -1.27
HERC1-213ENST00000561359 CRHR2Q13324 411 aa7.1□□□□□ -1.27
HERC1-213ENST00000561359 DIXDC1Q155Q3 683 aa7.1□□□□□ -1.27
HERC1-213ENST00000561359 OTUD7BQ6GQQ9 843 aa7.1□□□□□ -1.27
HERC1-213ENST00000561359 SLC10A4Q96EP9 437 aa7.1□□□□□ -1.27
HERC1-213ENST00000561359 ZBTB3Q9H5J0 574 aa7.1□□□□□ -1.27
HERC1-213ENST00000561359 NSFL1CQ9UNZ2 370 aaKnown RBP7.1□□□□□ -1.27
HERC1-213ENST00000561359 MOXD2PA6NHM9 499 aa7.09□□□□□ -1.27
HERC1-213ENST00000561359 IGF2BP3O00425 579 aaKnown RBP eCLIP7.09□□□□□ -1.27
HERC1-213ENST00000561359 ZBTB7BO15156 539 aaPredicted RBP7.09□□□□□ -1.27
HERC1-213ENST00000561359 MS4A1P11836 297 aa7.09□□□□□ -1.27
HERC1-213ENST00000561359 RPIAP49247 311 aa7.09□□□□□ -1.27
HERC1-213ENST00000561359 ZNF280AP59817 542 aaPredicted RBP7.09□□□□□ -1.27
HERC1-213ENST00000561359 CAP1Q01518 475 aa7.09□□□□□ -1.27
HERC1-213ENST00000561359 GRAPQ13588 217 aa7.09□□□□□ -1.27
HERC1-213ENST00000561359 TTLL7Q6ZT98 887 aa7.09□□□□□ -1.27
HERC1-213ENST00000561359 ZNF34Q8IZ26 560 aa7.09□□□□□ -1.27
HERC1-213ENST00000561359 GRAPLQ8TC17 118 aaPredicted RBP7.09□□□□□ -1.27
HERC1-213ENST00000561359 SH3TC2Q8TF17 1288 aa7.09□□□□□ -1.27
HERC1-213ENST00000561359 EYA3Q99504 573 aa7.09□□□□□ -1.27
HERC1-213ENST00000561359 UTP14AQ9BVJ6 771 aaKnown RBP7.09□□□□□ -1.27
HERC1-213ENST00000561359 MYOZ2Q9NPC6 264 aa7.09□□□□□ -1.27
HERC1-213ENST00000561359 STAP2Q9UGK3 403 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms