RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 STOX1Q6ZVD7 989 aa18.45■□□□□ 0.54
PBX1-219ENST00000560641 RPAINQ86UA6 219 aa18.45■□□□□ 0.54
PBX1-219ENST00000560641 VPS18Q9P253 973 aa18.45■□□□□ 0.54
PBX1-219ENST00000560641 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.45■□□□□ 0.54
PBX1-219ENST00000560641 ROBO2Q9HCK4 1378 aa18.45■□□□□ 0.54
PBX1-219ENST00000560641 PPFIA4O75335 1185 aa18.45■□□□□ 0.54
PBX1-219ENST00000560641 LMOD1P29536 600 aaPredicted RBP18.45■□□□□ 0.54
PBX1-219ENST00000560641 DSCC1Q9BVC3 393 aa18.45■□□□□ 0.54
PBX1-219ENST00000560641 CDC23Q9UJX2 597 aa18.45■□□□□ 0.54
PBX1-219ENST00000560641 PA2G4Q9UQ80 394 aaKnown RBP18.45■□□□□ 0.54
PBX1-219ENST00000560641 FDPSP14324 419 aaKnown RBP18.44■□□□□ 0.54
PBX1-219ENST00000560641 G3BP1Q13283 466 aaKnown RBP eCLIP18.44■□□□□ 0.54
PBX1-219ENST00000560641 MCMDC2Q4G0Z9 681 aa18.44■□□□□ 0.54
PBX1-219ENST00000560641 ARHGEF25Q86VW2 580 aa18.44■□□□□ 0.54
PBX1-219ENST00000560641 ERCC4Q92889 916 aaPredicted RBP18.44■□□□□ 0.54
PBX1-219ENST00000560641 NAA15Q9BXJ9 866 aaKnown RBP18.44■□□□□ 0.54
PBX1-219ENST00000560641 AKAP2Q9Y2D5 859 aa18.44■□□□□ 0.54
PBX1-219ENST00000560641 NBPF6Q5VWK0 638 aa18.44■□□□□ 0.54
PBX1-219ENST00000560641 WDR93Q6P2C0 686 aa18.44■□□□□ 0.54
PBX1-219ENST00000560641 NBPF4Q96M43 638 aa18.44■□□□□ 0.54
PBX1-219ENST00000560641 TLR7Q9NYK1 1049 aaKnown RBP18.44■□□□□ 0.54
PBX1-219ENST00000560641 KDM6AO15550 1401 aaPredicted RBP18.44■□□□□ 0.54
PBX1-219ENST00000560641 PARP4Q9UKK3 1724 aaKnown RBP18.44■□□□□ 0.54
PBX1-219ENST00000560641 KSR2Q6VAB6 950 aa18.44■□□□□ 0.54
PBX1-219ENST00000560641 CERS3Q8IU89 383 aa18.44■□□□□ 0.54
PBX1-219ENST00000560641 PANX2Q96RD6 677 aa18.44■□□□□ 0.54
PBX1-219ENST00000560641 PFKFB1P16118 471 aa18.43■□□□□ 0.54
PBX1-219ENST00000560641 ZNF18P17022 549 aa18.43■□□□□ 0.54
PBX1-219ENST00000560641 FECHP22830 423 aa18.43■□□□□ 0.54
PBX1-219ENST00000560641 PDIA3P30101 505 aaKnown RBP18.43■□□□□ 0.54
PBX1-219ENST00000560641 MMS22LQ6ZRQ5 1243 aa18.43■□□□□ 0.54
PBX1-219ENST00000560641 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
PBX1-219ENST00000560641 CLIC4Q9Y696 253 aa18.43■□□□□ 0.54
PBX1-219ENST00000560641 PPP6R2O75170 966 aa18.43■□□□□ 0.54
PBX1-219ENST00000560641 BOLA2Q9H3K6 86 aa18.43■□□□□ 0.54
PBX1-219ENST00000560641 ACBD3Q9H3P7 528 aa18.43■□□□□ 0.54
PBX1-219ENST00000560641 A0A087WUV0 522 aaPredicted RBP18.42■□□□□ 0.54
PBX1-219ENST00000560641 SERPINC1P01008 464 aa18.42■□□□□ 0.54
PBX1-219ENST00000560641 STK38Q15208 465 aa18.42■□□□□ 0.54
PBX1-219ENST00000560641 MYSM1Q5VVJ2 828 aa18.42■□□□□ 0.54
PBX1-219ENST00000560641 ECM29Q5VYK3 1845 aa18.42■□□□□ 0.54
PBX1-219ENST00000560641 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
PBX1-219ENST00000560641 SHOX2O60902 331 aaPredicted RBP18.42■□□□□ 0.54
PBX1-219ENST00000560641 EIF5P55010 431 aaKnown RBP18.42■□□□□ 0.54
PBX1-219ENST00000560641 GNL2Q13823 731 aaKnown RBP18.42■□□□□ 0.54
PBX1-219ENST00000560641 CFAP100Q494V2 611 aa18.42■□□□□ 0.54
PBX1-219ENST00000560641 SPECC1LQ69YQ0 1117 aa18.42■□□□□ 0.54
PBX1-219ENST00000560641 TOGARAM2Q6ZUX3 1019 aa18.42■□□□□ 0.54
PBX1-219ENST00000560641 ANKRD24Q8TF21 1146 aa18.42■□□□□ 0.54
PBX1-219ENST00000560641 MCTP2Q6DN12 878 aa18.41■□□□□ 0.54
PBX1-219ENST00000560641 LINS1Q8NG48 757 aa18.41■□□□□ 0.54
PBX1-219ENST00000560641 FAN1Q9Y2M0 1017 aa18.41■□□□□ 0.54
PBX1-219ENST00000560641 TMEM94Q12767 1356 aa18.41■□□□□ 0.54
PBX1-219ENST00000560641 SLC39A14Q15043 492 aa18.41■□□□□ 0.54
PBX1-219ENST00000560641 CCDC8Q9H0W5 538 aaPredicted RBP18.41■□□□□ 0.54
PBX1-219ENST00000560641 DEF6Q9H4E7 631 aa18.41■□□□□ 0.54
PBX1-219ENST00000560641 NWD2Q9ULI1 1742 aa18.41■□□□□ 0.54
PBX1-219ENST00000560641 MROH7-TTC4A0A0A0MT08 1334 aa18.41■□□□□ 0.54
PBX1-219ENST00000560641 ATXN2Q99700 1313 aaKnown RBP18.41■□□□□ 0.54
PBX1-219ENST00000560641 UBR1Q8IWV7 1749 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 GRM8O00222 908 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 CTCFLQ8NI51 663 aaPredicted RBP18.4■□□□□ 0.54
PBX1-219ENST00000560641 ZFP91Q96JP5 570 aaPredicted RBP18.4■□□□□ 0.54
PBX1-219ENST00000560641 PNKPQ96T60 521 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 HELLSQ9NRZ9 838 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 C9orf78Q9NZ63 289 aaPredicted RBP18.4■□□□□ 0.54
PBX1-219ENST00000560641 TMEM232C9JQI7 657 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 NT5DC1Q5TFE4 455 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 TADA2BQ86TJ2 420 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 HAUS7Q99871 368 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 LTN1O94822 1766 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 CCDC175P0C221 793 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 SF3B2Q13435 895 aaKnown RBP18.4■□□□□ 0.54
PBX1-219ENST00000560641 CASP8Q14790 479 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 WHAMMP3Q1A5X7 153 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 ANO1Q5XXA6 986 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 CCDC91Q7Z6B0 441 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
PBX1-219ENST00000560641 ADAMTS13Q76LX8 1427 aa18.39■□□□□ 0.54
PBX1-219ENST00000560641 PRPF6O94906 941 aaKnown RBP18.39■□□□□ 0.53
PBX1-219ENST00000560641 CT47A1Q5JQC4 288 aaPredicted RBP18.39■□□□□ 0.53
PBX1-219ENST00000560641 FOXR1Q6PIV2 292 aa18.39■□□□□ 0.53
PBX1-219ENST00000560641 SENP3Q9H4L4 574 aaPredicted RBP18.39■□□□□ 0.53
PBX1-219ENST00000560641 ABCB6Q9NP58 842 aa18.39■□□□□ 0.53
PBX1-219ENST00000560641 MYO1AQ9UBC5 1043 aa18.39■□□□□ 0.53
PBX1-219ENST00000560641 HOXC9P31274 260 aa18.38■□□□□ 0.53
PBX1-219ENST00000560641 SF3A1Q15459 793 aaKnown RBP18.38■□□□□ 0.53
PBX1-219ENST00000560641 CCDC12Q8WUD4 166 aaPredicted RBP18.38■□□□□ 0.53
PBX1-219ENST00000560641 COPRSQ9NQ92 184 aa18.38■□□□□ 0.53
PBX1-219ENST00000560641 MAP3K2Q9Y2U5 619 aa18.38■□□□□ 0.53
PBX1-219ENST00000560641 TACO1Q9BSH4 297 aaKnown RBP18.38■□□□□ 0.53
PBX1-219ENST00000560641 RESP18Q5W5W9 173 aa18.38■□□□□ 0.53
PBX1-219ENST00000560641 CNNM3Q8NE01 707 aa18.38■□□□□ 0.53
PBX1-219ENST00000560641 SIL1Q9H173 461 aa18.38■□□□□ 0.53
PBX1-219ENST00000560641 BICC1Q9H694 974 aaKnown RBP18.38■□□□□ 0.53
PBX1-219ENST00000560641 MRPL44Q9H9J2 332 aaKnown RBP18.38■□□□□ 0.53
PBX1-219ENST00000560641 WDR19Q8NEZ3 1342 aa18.37■□□□□ 0.53
PBX1-219ENST00000560641 SLIT3O75094 1523 aa18.37■□□□□ 0.53
PBX1-219ENST00000560641 DNAJC21Q5F1R6 531 aaKnown RBP18.37■□□□□ 0.53
PBX1-219ENST00000560641 OLFM4Q6UX06 510 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms