RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 ZIC5Q96T25 663 aa21.84■■□□□ 1.09
SMAD3-210ENST00000559092 AKAP2Q9Y2D5 859 aa21.84■■□□□ 1.09
SMAD3-210ENST00000559092 MAST3O60307 1309 aa21.83■■□□□ 1.09
SMAD3-210ENST00000559092 SEMA3EO15041 775 aa21.83■■□□□ 1.09
SMAD3-210ENST00000559092 KIF23Q02241 960 aaPredicted RBP21.83■■□□□ 1.09
SMAD3-210ENST00000559092 MOB2Q70IA6 237 aa21.83■■□□□ 1.09
SMAD3-210ENST00000559092 RASAL3Q86YV0 1011 aa21.83■■□□□ 1.09
SMAD3-210ENST00000559092 TEKT1Q969V4 418 aa21.83■■□□□ 1.09
SMAD3-210ENST00000559092 VEZTQ9HBM0 779 aa21.83■■□□□ 1.09
SMAD3-210ENST00000559092 ZNF70Q9UC06 446 aaPredicted RBP21.83■■□□□ 1.09
SMAD3-210ENST00000559092 RASA3Q14644 834 aa21.82■■□□□ 1.08
SMAD3-210ENST00000559092 GRIK5Q16478 980 aa21.82■■□□□ 1.08
SMAD3-210ENST00000559092 ZDHHC15Q96MV8 337 aa21.82■■□□□ 1.08
SMAD3-210ENST00000559092 PAPPA2Q9BXP8 1791 aa21.82■■□□□ 1.08
SMAD3-210ENST00000559092 UNCXA6NJT0 531 aa21.81■■□□□ 1.08
SMAD3-210ENST00000559092 PPP1R12BO60237 982 aaPredicted RBP21.81■■□□□ 1.08
SMAD3-210ENST00000559092 MAP3K11Q16584 847 aa21.81■■□□□ 1.08
SMAD3-210ENST00000559092 LDLRAD1Q5T700 205 aa21.81■■□□□ 1.08
SMAD3-210ENST00000559092 TDRD3Q9H7E2 651 aaKnown RBP21.81■■□□□ 1.08
SMAD3-210ENST00000559092 DENND2AQ9ULE3 1009 aa21.81■■□□□ 1.08
SMAD3-210ENST00000559092 AOX1Q06278 1338 aa21.8■■□□□ 1.08
SMAD3-210ENST00000559092 ZBTB7BO15156 539 aaPredicted RBP21.8■■□□□ 1.08
SMAD3-210ENST00000559092 HHIPL2Q6UWX4 724 aa21.8■■□□□ 1.08
SMAD3-210ENST00000559092 SAGE1Q9NXZ1 904 aa21.8■■□□□ 1.08
SMAD3-210ENST00000559092 PNMA6EA0A0J9YXQ4 647 aa21.79■■□□□ 1.08
SMAD3-210ENST00000559092 MS4A1P11836 297 aa21.79■■□□□ 1.08
SMAD3-210ENST00000559092 TIMM10P62072 90 aa21.79■■□□□ 1.08
SMAD3-210ENST00000559092 ATP8B2P98198 1209 aa21.79■■□□□ 1.08
SMAD3-210ENST00000559092 TFCP2Q12800 502 aa21.79■■□□□ 1.08
SMAD3-210ENST00000559092 G3BP1Q13283 466 aaKnown RBP eCLIP21.79■■□□□ 1.08
SMAD3-210ENST00000559092 CCDC102BQ68D86 513 aa21.79■■□□□ 1.08
SMAD3-210ENST00000559092 ITPRIPQ8IWB1 547 aa21.79■■□□□ 1.08
SMAD3-210ENST00000559092 CSRNP1Q96S65 589 aa21.79■■□□□ 1.08
SMAD3-210ENST00000559092 SALL1Q9NSC2 1324 aa21.79■■□□□ 1.08
SMAD3-210ENST00000559092 RLBP1P12271 317 aa21.78■■□□□ 1.08
SMAD3-210ENST00000559092 PHKA1P46020 1223 aa21.78■■□□□ 1.08
SMAD3-210ENST00000559092 TNNI2P48788 182 aa21.78■■□□□ 1.08
SMAD3-210ENST00000559092 ANGEL1Q9UNK9 670 aaKnown RBP21.78■■□□□ 1.08
SMAD3-210ENST00000559092 A0A1B0GUL7 405 aa21.77■■□□□ 1.08
SMAD3-210ENST00000559092 ADORA1P30542 326 aa21.77■■□□□ 1.08
SMAD3-210ENST00000559092 PRKG1Q13976 671 aa21.77■■□□□ 1.08
SMAD3-210ENST00000559092 POLA2Q14181 598 aa21.77■■□□□ 1.08
SMAD3-210ENST00000559092 MVPQ14764 893 aaKnown RBP21.77■■□□□ 1.08
SMAD3-210ENST00000559092 NBPF12Q5TAG4 269 aaPredicted RBP21.77■■□□□ 1.08
SMAD3-210ENST00000559092 FKBP1CQ5VVH2 108 aa21.77■■□□□ 1.08
SMAD3-210ENST00000559092 APOBEC3HQ6NTF7 200 aaKnown RBP21.77■■□□□ 1.08
SMAD3-210ENST00000559092 SSH3Q8TE77 659 aa21.77■■□□□ 1.08
SMAD3-210ENST00000559092 PDS5AQ29RF7 1337 aaKnown RBP21.77■■□□□ 1.07
SMAD3-210ENST00000559092 ZGPATQ8N5A5 531 aaKnown RBP21.76■■□□□ 1.07
SMAD3-210ENST00000559092 XAGE2Q96GT9 111 aa21.76■■□□□ 1.07
SMAD3-210ENST00000559092 LDHBP07195 334 aaKnown RBP21.75■■□□□ 1.07
SMAD3-210ENST00000559092 RNF186Q9NXI6 227 aa21.75■■□□□ 1.07
SMAD3-210ENST00000559092 TMOD2Q9NZR1 351 aa21.75■■□□□ 1.07
SMAD3-210ENST00000559092 TCP10L2B9ZVM9 353 aa21.74■■□□□ 1.07
SMAD3-210ENST00000559092 IREB2P48200 963 aaKnown RBP21.74■■□□□ 1.07
SMAD3-210ENST00000559092 FAM83AQ86UY5 434 aa21.74■■□□□ 1.07
SMAD3-210ENST00000559092 SLC10A4Q96EP9 437 aa21.74■■□□□ 1.07
SMAD3-210ENST00000559092 TEPSINQ96N21 525 aa21.74■■□□□ 1.07
SMAD3-210ENST00000559092 NEUROD6Q96NK8 337 aa21.74■■□□□ 1.07
SMAD3-210ENST00000559092 TSKSQ9UJT2 592 aa21.74■■□□□ 1.07
SMAD3-210ENST00000559092 USP2O75604 605 aaPredicted RBP21.73■■□□□ 1.07
SMAD3-210ENST00000559092 TM4SF4P48230 202 aa21.73■■□□□ 1.07
SMAD3-210ENST00000559092 GPR108Q9NPR9 543 aa21.73■■□□□ 1.07
SMAD3-210ENST00000559092 TRPA1O75762 1119 aa21.72■■□□□ 1.07
SMAD3-210ENST00000559092 PRDX5P30044 214 aa21.72■■□□□ 1.07
SMAD3-210ENST00000559092 RASGRF1Q13972 1273 aa21.72■■□□□ 1.07
SMAD3-210ENST00000559092 GORABQ5T7V8 394 aa21.72■■□□□ 1.07
SMAD3-210ENST00000559092 SPRYD7Q5W111 196 aa21.72■■□□□ 1.07
SMAD3-210ENST00000559092 SPTY2D1Q68D10 685 aaPredicted RBP21.72■■□□□ 1.07
SMAD3-210ENST00000559092 PANK1Q8TE04 598 aa21.72■■□□□ 1.07
SMAD3-210ENST00000559092 HOOK2Q96ED9 719 aa21.72■■□□□ 1.07
SMAD3-210ENST00000559092 TMEM39BQ9GZU3 492 aa21.72■■□□□ 1.07
SMAD3-210ENST00000559092 NOP58Q9Y2X3 529 aaKnown RBP21.72■■□□□ 1.07
SMAD3-210ENST00000559092 SSC5DA1L4H1 1573 aa21.72■■□□□ 1.07
SMAD3-210ENST00000559092 SREBF2Q12772 1141 aa21.71■■□□□ 1.07
SMAD3-210ENST00000559092 ANKRD13AQ8IZ07 590 aa21.71■■□□□ 1.07
SMAD3-210ENST00000559092 FZD1Q9UP38 647 aa21.71■■□□□ 1.07
SMAD3-210ENST00000559092 DAGLAQ9Y4D2 1042 aa21.71■■□□□ 1.07
SMAD3-210ENST00000559092 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.71■■□□□ 1.07
SMAD3-210ENST00000559092 SURF6O75683 361 aaKnown RBP21.7■■□□□ 1.06
SMAD3-210ENST00000559092 ZBTB48P10074 688 aaPredicted RBP21.7■■□□□ 1.06
SMAD3-210ENST00000559092 INHBEP58166 350 aa21.7■■□□□ 1.06
SMAD3-210ENST00000559092 SLF2Q8IX21 1173 aa21.7■■□□□ 1.06
SMAD3-210ENST00000559092 C1orf115Q9H7X2 142 aa21.7■■□□□ 1.06
SMAD3-210ENST00000559092 RCAN3Q9UKA8 241 aa21.7■■□□□ 1.06
SMAD3-210ENST00000559092 ARAP2Q8WZ64 1704 aa21.69■■□□□ 1.06
SMAD3-210ENST00000559092 CACNB3P54284 484 aa21.69■■□□□ 1.06
SMAD3-210ENST00000559092 OS9Q13438 667 aaPredicted RBP21.69■■□□□ 1.06
SMAD3-210ENST00000559092 DIXDC1Q155Q3 683 aa21.69■■□□□ 1.06
SMAD3-210ENST00000559092 FAM163AQ96GL9 167 aaPredicted RBP21.69■■□□□ 1.06
SMAD3-210ENST00000559092 MANSC4A6NHS7 340 aaPredicted RBP21.68■■□□□ 1.06
SMAD3-210ENST00000559092 UQCRFS1P1P0C7P4 283 aa21.68■■□□□ 1.06
SMAD3-210ENST00000559092 CDC42EP5Q6NZY7 148 aa21.68■■□□□ 1.06
SMAD3-210ENST00000559092 CLMNQ96JQ2 1002 aa21.68■■□□□ 1.06
SMAD3-210ENST00000559092 ARID4AP29374 1257 aaPredicted RBP21.67■■□□□ 1.06
SMAD3-210ENST00000559092 MAP3K9P80192 1104 aa21.67■■□□□ 1.06
SMAD3-210ENST00000559092 TNNI3KQ59H18 835 aa21.67■■□□□ 1.06
SMAD3-210ENST00000559092 CEP85Q6P2H3 762 aa21.67■■□□□ 1.06
SMAD3-210ENST00000559092 CDAN1Q8IWY9 1227 aa21.67■■□□□ 1.06
SMAD3-210ENST00000559092 SPATA5Q8NB90 893 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms