RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 PCBP4P57723 403 aaKnown RBP2.81□□□□□ -1.96
HIF1A-212ENST00000557538 SOGA3Q5TF21 947 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 PSAPL1Q6NUJ1 521 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 NT5DC4Q86YG4 428 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 FAM161BQ96MY7 647 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 TRIM56Q9BRZ2 755 aaKnown RBP2.81□□□□□ -1.96
HIF1A-212ENST00000557538 SUGCTQ9HAC7 445 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 ALBP02768 609 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 EIF2AK2P19525 551 aaKnown RBP2.8□□□□□ -1.96
HIF1A-212ENST00000557538 HNRNPUQ00839 825 aaKnown RBP eCLIP2.8□□□□□ -1.967e-6■□□□□ 10.8
HIF1A-212ENST00000557538 C19orf57Q0VDD7 668 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 MPP2Q14168 576 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 NBPF6Q5VWK0 638 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 CEP135Q66GS9 1140 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 SREK1Q8WXA9 508 aaKnown RBP2.8□□□□□ -1.96
HIF1A-212ENST00000557538 NBPF4Q96M43 638 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 NSUN5Q96P11 429 aaKnown RBP2.8□□□□□ -1.96
HIF1A-212ENST00000557538 HHIPQ96QV1 700 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 LILRB5O75023 590 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 CPB1P15086 417 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 TFE3P19532 575 aaPredicted RBP2.8□□□□□ -1.96
HIF1A-212ENST00000557538 SETDB1Q15047 1291 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 FAM196AQ6ZSG2 479 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 USP48Q86UV5 1035 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 GALNT6Q8NCL4 622 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 MKL1Q969V6 931 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 DRC1Q96MC2 740 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 ADAMTS1Q9UHI8 967 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 ADAM30Q9UKF2 790 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 PCDHGC5Q9Y5F6 944 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 SPDYE3A6NKU9 549 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 GNB5O14775 395 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 CYP11A1P05108 521 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 ARL4DP49703 201 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 CABP4P57796 275 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 MEI1Q5TIA1 1274 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 RAB44Q7Z6P3 723 aaPredicted RBP2.8□□□□□ -1.96
HIF1A-212ENST00000557538 WFDC8Q8IUA0 241 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 SMG8Q8ND04 991 aaKnown RBP2.8□□□□□ -1.96
HIF1A-212ENST00000557538 GATAD2BQ8WXI9 593 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 ZNF775Q96BV0 537 aaPredicted RBP2.8□□□□□ -1.96
HIF1A-212ENST00000557538 TRIM33Q9UPN9 1127 aa2.8□□□□□ -1.96
HIF1A-212ENST00000557538 SUPT16HQ9Y5B9 1047 aaKnown RBP2.8□□□□□ -1.96
HIF1A-212ENST00000557538 MEIS3P2A8K0S8 358 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 GFRA2O00451 464 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 FSCN2O14926 492 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 FGRP09769 529 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 EPHA1P21709 976 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 EIF4A3P38919 411 aaKnown RBP2.79□□□□□ -1.96
HIF1A-212ENST00000557538 IKBKEQ14164 716 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 TMEM201Q5SNT2 666 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 LRP10Q7Z4F1 713 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 IL22RA1Q8N6P7 574 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 GAL3ST3Q96A11 431 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 TMPRSS13Q9BYE2 586 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 GNL2Q13823 731 aaKnown RBP2.79□□□□□ -1.96
HIF1A-212ENST00000557538 NAALADL2Q58DX5 795 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 CYFIP1Q7L576 1253 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 KIAA0825Q8IV33 1275 aa2.79□□□□□ -1.96
HIF1A-212ENST00000557538 TTF2Q9UNY4 1162 aaKnown RBP2.79□□□□□ -1.96
HIF1A-212ENST00000557538 M0R082 166 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 GSTP1P09211 210 aaKnown RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 RPL6Q02878 288 aaKnown RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 MLLT1Q03111 559 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 CAMK2GQ13555 558 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 CCDC85BQ15834 202 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 PCNX4Q63HM2 1172 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 DIEXFQ68CQ4 756 aaKnown RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 TTBK2Q6IQ55 1244 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 FAM117BQ6P1L5 589 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 HFE2Q6ZVN8 426 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 FMR1NBQ8N0W7 255 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 C19orf47Q8N9M1 422 aaKnown RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 ZNF417Q8TAU3 575 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 UBXN4Q92575 508 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 GPRASP2Q96D09 838 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 EAF1Q96JC9 268 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 ZNF587Q96SQ5 575 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 CCSER2Q9H7U1 834 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 KBTBD4Q9NVX7 518 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 IMPDH2P12268 514 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 SELPP16109 830 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 ATF4P18848 351 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 RASIP1Q5U651 963 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 SULF2Q8IWU5 870 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 WHAMMQ8TF30 809 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 ZNF669Q96BR6 464 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 GGT7Q9UJ14 662 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 A0A0A0MRY4 1105 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 FAM177BA6PVY3 158 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 DEAF1O75398 565 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 EXOSC6Q5RKV6 272 aaKnown RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 LLGL2Q6P1M3 1020 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 ZNF296Q8WUU4 475 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 LENG1Q96BZ8 264 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-212ENST00000557538 COPRSQ9NQ92 184 aa2.78□□□□□ -1.96
HIF1A-212ENST00000557538 PAGE1O75459 146 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 TIAF1O95411 115 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 CELA3AP09093 270 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 ELNP15502 786 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms