RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 DZIP1LQ8IYY4 767 aaKnown RBP17.7■□□□□ 0.42
SNX6-210ENST00000557341 TDRD3Q9H7E2 651 aaKnown RBP17.7■□□□□ 0.42
SNX6-210ENST00000557341 MAST3O60307 1309 aa17.7■□□□□ 0.42
SNX6-210ENST00000557341 UNCXA6NJT0 531 aa17.69■□□□□ 0.42
SNX6-210ENST00000557341 ZBTB48P10074 688 aaPredicted RBP17.69■□□□□ 0.42
SNX6-210ENST00000557341 IREB2P48200 963 aaKnown RBP17.69■□□□□ 0.42
SNX6-210ENST00000557341 BCAMP50895 628 aa17.69■□□□□ 0.42
SNX6-210ENST00000557341 RARSP54136 660 aaKnown RBP17.69■□□□□ 0.42
SNX6-210ENST00000557341 HDLBPQ00341 1268 aaKnown RBP17.69■□□□□ 0.42
SNX6-210ENST00000557341 LPIN2Q92539 896 aa17.69■□□□□ 0.42
SNX6-210ENST00000557341 FBXO3Q9UK99 471 aa17.69■□□□□ 0.42
SNX6-210ENST00000557341 TNRC18O15417 2968 aaPredicted RBP17.69■□□□□ 0.42
SNX6-210ENST00000557341 CIAO1O76071 339 aa17.68■□□□□ 0.42
SNX6-210ENST00000557341 TNNI2P48788 182 aa17.68■□□□□ 0.42
SNX6-210ENST00000557341 GRIK5Q16478 980 aa17.68■□□□□ 0.42
SNX6-210ENST00000557341 TEKT1Q969V4 418 aa17.68■□□□□ 0.42
SNX6-210ENST00000557341 SLC10A4Q96EP9 437 aa17.68■□□□□ 0.42
SNX6-210ENST00000557341 SIL1Q9H173 461 aa17.68■□□□□ 0.42
SNX6-210ENST00000557341 SUGT1Q9Y2Z0 365 aa17.68■□□□□ 0.42
SNX6-210ENST00000557341 LRRFIP2Q9Y608 721 aaKnown RBP17.68■□□□□ 0.42
SNX6-210ENST00000557341 MANSC4A6NHS7 340 aaPredicted RBP17.67■□□□□ 0.42
SNX6-210ENST00000557341 TBC1D8O95759 1140 aa17.67■□□□□ 0.42
SNX6-210ENST00000557341 ATG9AQ7Z3C6 839 aa17.67■□□□□ 0.42
SNX6-210ENST00000557341 CTU1Q7Z7A3 348 aaKnown RBP17.67■□□□□ 0.42
SNX6-210ENST00000557341 ANKRD13AQ8IZ07 590 aa17.67■□□□□ 0.42
SNX6-210ENST00000557341 WNK4Q96J92 1243 aa17.67■□□□□ 0.42
SNX6-210ENST00000557341 CLMNQ96JQ2 1002 aa17.67■□□□□ 0.42
SNX6-210ENST00000557341 TCP10L2B9ZVM9 353 aa17.66■□□□□ 0.42
SNX6-210ENST00000557341 ALDH1A1P00352 501 aa17.66■□□□□ 0.42
SNX6-210ENST00000557341 NOM1Q5C9Z4 860 aaKnown RBP17.66■□□□□ 0.42
SNX6-210ENST00000557341 ZNF296Q8WUU4 475 aaPredicted RBP17.66■□□□□ 0.42
SNX6-210ENST00000557341 ARHGAP45Q92619 1136 aa17.66■□□□□ 0.42
SNX6-210ENST00000557341 MEIS3Q99687 375 aa17.66■□□□□ 0.42
SNX6-210ENST00000557341 CFHR5Q9BXR6 569 aa17.66■□□□□ 0.42
SNX6-210ENST00000557341 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.66■□□□□ 0.42
SNX6-210ENST00000557341 USP2O75604 605 aaPredicted RBP17.65■□□□□ 0.42
SNX6-210ENST00000557341 INHBEP58166 350 aa17.65■□□□□ 0.42
SNX6-210ENST00000557341 ATP2B3Q16720 1220 aa17.65■□□□□ 0.42
SNX6-210ENST00000557341 WDR66Q8TBY9 1149 aa17.65■□□□□ 0.42
SNX6-210ENST00000557341 ZDHHC15Q96MV8 337 aa17.65■□□□□ 0.42
SNX6-210ENST00000557341 TEPSINQ96N21 525 aa17.65■□□□□ 0.42
SNX6-210ENST00000557341 TMOD2Q9NZR1 351 aa17.65■□□□□ 0.42
SNX6-210ENST00000557341 CEP126Q9P2H0 1117 aa17.65■□□□□ 0.42
SNX6-210ENST00000557341 GPR25O00155 361 aa17.64■□□□□ 0.41
SNX6-210ENST00000557341 IL15P40933 162 aaPredicted RBP17.64■□□□□ 0.41
SNX6-210ENST00000557341 INTS3Q68E01 1043 aaKnown RBP17.64■□□□□ 0.41
SNX6-210ENST00000557341 TMEM39BQ9GZU3 492 aa17.64■□□□□ 0.41
SNX6-210ENST00000557341 RPAP1Q9BWH6 1393 aaPredicted RBP17.64■□□□□ 0.41
SNX6-210ENST00000557341 GNAI3P08754 354 aa17.63■□□□□ 0.41
SNX6-210ENST00000557341 IFNL1Q8IU54 200 aa17.63■□□□□ 0.41
SNX6-210ENST00000557341 CDAN1Q8IWY9 1227 aa17.63■□□□□ 0.41
SNX6-210ENST00000557341 MRIQ9BWK5 157 aa17.63■□□□□ 0.41
SNX6-210ENST00000557341 COPRSQ9NQ92 184 aa17.63■□□□□ 0.41
SNX6-210ENST00000557341 HTTP42858 3142 aa17.63■□□□□ 0.41
SNX6-210ENST00000557341 MAST2Q6P0Q8 1798 aa17.62■□□□□ 0.41
SNX6-210ENST00000557341 IPO8O15397 1037 aaKnown RBP17.62■□□□□ 0.41
SNX6-210ENST00000557341 RGS19P49795 217 aa17.62■□□□□ 0.41
SNX6-210ENST00000557341 CACNB3P54284 484 aa17.62■□□□□ 0.41
SNX6-210ENST00000557341 MLLT1Q03111 559 aaPredicted RBP17.62■□□□□ 0.41
SNX6-210ENST00000557341 PKN2Q16513 984 aaKnown RBP17.62■□□□□ 0.41
SNX6-210ENST00000557341 HHIPL2Q6UWX4 724 aa17.62■□□□□ 0.41
SNX6-210ENST00000557341 GNL3LQ9NVN8 582 aaKnown RBP17.62■□□□□ 0.41
SNX6-210ENST00000557341 PA2G4Q9UQ80 394 aaKnown RBP17.62■□□□□ 0.41
SNX6-210ENST00000557341 RBBP6Q7Z6E9 1792 aaKnown RBP17.61■□□□□ 0.41
SNX6-210ENST00000557341 GJA5P36382 358 aa17.61■□□□□ 0.41
SNX6-210ENST00000557341 FKBP1CQ5VVH2 108 aa17.61■□□□□ 0.41
SNX6-210ENST00000557341 FAM83AQ86UY5 434 aa17.61■□□□□ 0.41
SNX6-210ENST00000557341 OPTNQ96CV9 577 aa17.61■□□□□ 0.41
SNX6-210ENST00000557341 ELP3Q9H9T3 547 aa17.61■□□□□ 0.41
SNX6-210ENST00000557341 IGF2BP3O00425 579 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNX6-210ENST00000557341 SEMA3EO15041 775 aa17.6■□□□□ 0.41
SNX6-210ENST00000557341 FKTNO75072 461 aa17.6■□□□□ 0.41
SNX6-210ENST00000557341 TRIM27P14373 513 aa17.6■□□□□ 0.41
SNX6-210ENST00000557341 OTUD7BQ6GQQ9 843 aa17.6■□□□□ 0.41
SNX6-210ENST00000557341 APOBEC3HQ6NTF7 200 aaKnown RBP17.6■□□□□ 0.41
SNX6-210ENST00000557341 ATF7IPQ6VMQ6 1270 aa17.6■□□□□ 0.41
SNX6-210ENST00000557341 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNX6-210ENST00000557341 HOOK2Q96ED9 719 aa17.6■□□□□ 0.41
SNX6-210ENST00000557341 CSADQ9Y600 493 aa17.6■□□□□ 0.41
SNX6-210ENST00000557341 SALL1Q9NSC2 1324 aa17.6■□□□□ 0.41
SNX6-210ENST00000557341 CENPFP49454 3210 aa17.6■□□□□ 0.41
SNX6-210ENST00000557341 DOCK1Q14185 1865 aa17.59■□□□□ 0.41
SNX6-210ENST00000557341 SRGAP3O43295 1099 aa17.59■□□□□ 0.41
SNX6-210ENST00000557341 PRDX5P30044 214 aa17.59■□□□□ 0.41
SNX6-210ENST00000557341 PHKA1P46020 1223 aa17.59■□□□□ 0.41
SNX6-210ENST00000557341 MTX1Q13505 466 aa17.59■□□□□ 0.41
SNX6-210ENST00000557341 VGLL4Q14135 290 aa17.59■□□□□ 0.41
SNX6-210ENST00000557341 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.59■□□□□ 0.41
SNX6-210ENST00000557341 FRAT1Q92837 279 aaPredicted RBP17.59■□□□□ 0.41
SNX6-210ENST00000557341 DENND2AQ9ULE3 1009 aa17.59■□□□□ 0.41
SNX6-210ENST00000557341 BCAR3O75815 825 aa17.58■□□□□ 0.4
SNX6-210ENST00000557341 LDHBP07195 334 aaKnown RBP17.58■□□□□ 0.4
SNX6-210ENST00000557341 R3HDMLQ9H3Y0 253 aa17.58■□□□□ 0.4
SNX6-210ENST00000557341 HPS5Q9UPZ3 1129 aa17.58■□□□□ 0.4
SNX6-210ENST00000557341 DAGLAQ9Y4D2 1042 aa17.58■□□□□ 0.4
SNX6-210ENST00000557341 PTPRFP10586 1907 aa17.58■□□□□ 0.4
SNX6-210ENST00000557341 ATAD5Q96QE3 1844 aa17.58■□□□□ 0.4
SNX6-210ENST00000557341 CDK5RAP2Q96SN8 1893 aa17.57■□□□□ 0.4
SNX6-210ENST00000557341 MYO5AQ9Y4I1 1855 aaKnown RBP17.57■□□□□ 0.4
SNX6-210ENST00000557341 TESPA1A2RU30 521 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms