RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 NPHS2Q9NP85 383 aa8.96□□□□□ -0.98
HIF1A-209ENST00000556827 HIF3AQ9Y2N7 669 aa8.96□□□□□ -0.98
HIF1A-209ENST00000556827 RNF43Q68DV7 783 aa8.95□□□□□ -0.98
HIF1A-209ENST00000556827 SND1Q7KZF4 910 aaKnown RBP eCLIP8.95□□□□□ -0.98
HIF1A-209ENST00000556827 DBNDD2Q9BQY9 259 aa8.95□□□□□ -0.98
HIF1A-209ENST00000556827 TMPRSS13Q9BYE2 586 aa8.95□□□□□ -0.98
HIF1A-209ENST00000556827 GPR182O15218 404 aa8.94□□□□□ -0.98
HIF1A-209ENST00000556827 RXRBP28702 533 aa8.94□□□□□ -0.98
HIF1A-209ENST00000556827 KIAA0319Q5VV43 1072 aa8.94□□□□□ -0.98
HIF1A-209ENST00000556827 SMG8Q8ND04 991 aaKnown RBP8.94□□□□□ -0.98
HIF1A-209ENST00000556827 FAM83CQ9BQN1 747 aa8.94□□□□□ -0.98
HIF1A-209ENST00000556827 NIF3L1Q9GZT8 377 aa8.94□□□□□ -0.98
HIF1A-209ENST00000556827 EIF1AYO14602 144 aaKnown RBP8.93□□□□□ -0.98
HIF1A-209ENST00000556827 DLGAP3O95886 979 aa8.93□□□□□ -0.98
HIF1A-209ENST00000556827 TGFB1P01137 390 aa8.93□□□□□ -0.98
HIF1A-209ENST00000556827 MAP4P27816 1152 aaKnown RBP8.93□□□□□ -0.98
HIF1A-209ENST00000556827 SUGCTQ9HAC7 445 aa8.93□□□□□ -0.98
HIF1A-209ENST00000556827 CUX2O14529 1486 aa8.93□□□□□ -0.98
HIF1A-209ENST00000556827 NCAPD3P42695 1498 aa8.93□□□□□ -0.98
HIF1A-209ENST00000556827 GADD45BO75293 160 aaPredicted RBP8.92□□□□□ -0.98
HIF1A-209ENST00000556827 MAPK1P28482 360 aa8.92□□□□□ -0.98
HIF1A-209ENST00000556827 ZNF423Q2M1K9 1284 aa8.92□□□□□ -0.98
HIF1A-209ENST00000556827 SGO2Q562F6 1265 aa8.92□□□□□ -0.98
HIF1A-209ENST00000556827 EXOSC6Q5RKV6 272 aaKnown RBP8.92□□□□□ -0.98
HIF1A-209ENST00000556827 ZDHHC13Q8IUH4 622 aa8.92□□□□□ -0.98
HIF1A-209ENST00000556827 DDX54Q8TDD1 881 aaKnown RBP8.92□□□□□ -0.98
HIF1A-209ENST00000556827 DMRTB1Q96MA1 342 aa8.92□□□□□ -0.98
HIF1A-209ENST00000556827 DNAJC25Q9H1X3 360 aa8.92□□□□□ -0.98
HIF1A-209ENST00000556827 COBLO75128 1261 aa8.91□□□□□ -0.98
HIF1A-209ENST00000556827 TIAF1O95411 115 aa8.91□□□□□ -0.98
HIF1A-209ENST00000556827 CYP11A1P05108 521 aa8.91□□□□□ -0.98
HIF1A-209ENST00000556827 MAOBP27338 520 aa8.91□□□□□ -0.98
HIF1A-209ENST00000556827 USP11P51784 963 aa8.91□□□□□ -0.98
HIF1A-209ENST00000556827 CCDC74AQ96AQ1 378 aa8.91□□□□□ -0.98
HIF1A-209ENST00000556827 DRD2P14416 443 aa8.9□□□□□ -0.98
HIF1A-209ENST00000556827 GRIK1P39086 918 aa8.9□□□□□ -0.98
HIF1A-209ENST00000556827 CD97P48960 835 aa8.9□□□□□ -0.98
HIF1A-209ENST00000556827 POU4F3Q15319 338 aa8.9□□□□□ -0.98
HIF1A-209ENST00000556827 HP1BP3Q5SSJ5 553 aaPredicted RBP8.9□□□□□ -0.98
HIF1A-209ENST00000556827 RBCK1Q9BYM8 510 aa8.9□□□□□ -0.98
HIF1A-209ENST00000556827 NRSN2Q9GZP1 204 aa8.9□□□□□ -0.98
HIF1A-209ENST00000556827 ZNF576Q9H609 170 aa8.9□□□□□ -0.98
HIF1A-209ENST00000556827 DCTN4Q9UJW0 460 aa8.9□□□□□ -0.98
HIF1A-209ENST00000556827 B3GALT4O96024 378 aa8.89□□□□□ -0.99
HIF1A-209ENST00000556827 SHKBP1Q8TBC3 707 aa8.89□□□□□ -0.99
HIF1A-209ENST00000556827 CSRNP1Q96S65 589 aa8.89□□□□□ -0.99
HIF1A-209ENST00000556827 CORO1BQ9BR76 489 aa8.89□□□□□ -0.99
HIF1A-209ENST00000556827 IGHA2P01877 340 aa8.88□□□□□ -0.99
HIF1A-209ENST00000556827 ITPKAP23677 461 aa8.88□□□□□ -0.99
HIF1A-209ENST00000556827 MFSD14AQ96MC6 490 aa8.88□□□□□ -0.99
HIF1A-209ENST00000556827 YIPF2Q9BWQ6 316 aa8.88□□□□□ -0.99
HIF1A-209ENST00000556827 ZFYVE1Q9HBF4 777 aa8.88□□□□□ -0.99
HIF1A-209ENST00000556827 ABCB6Q9NP58 842 aa8.88□□□□□ -0.99
HIF1A-209ENST00000556827 TRAK1Q9UPV9 953 aa8.88□□□□□ -0.99
HIF1A-209ENST00000556827 ATAD2BQ9ULI0 1458 aa8.88□□□□□ -0.99
HIF1A-209ENST00000556827 FAM95CA0A1B0GW59 222 aa8.87□□□□□ -0.99
HIF1A-209ENST00000556827 WDR64B1ANS9 1081 aa8.87□□□□□ -0.99
HIF1A-209ENST00000556827 ADH5P11766 374 aa8.87□□□□□ -0.99
HIF1A-209ENST00000556827 SOX4Q06945 474 aaPredicted RBP8.87□□□□□ -0.99
HIF1A-209ENST00000556827 PAOXQ6QHF9 649 aa8.87□□□□□ -0.99
HIF1A-209ENST00000556827 TMC7Q7Z402 723 aa8.87□□□□□ -0.99
HIF1A-209ENST00000556827 FBXL6Q8N531 539 aa8.87□□□□□ -0.99
HIF1A-209ENST00000556827 C2CD4AQ8NCU7 369 aaPredicted RBP8.87□□□□□ -0.99
HIF1A-209ENST00000556827 GIMAP7Q8NHV1 300 aa8.87□□□□□ -0.99
HIF1A-209ENST00000556827 FBLIM1Q8WUP2 373 aa8.87□□□□□ -0.99
HIF1A-209ENST00000556827 ALKBH8Q96BT7 664 aaKnown RBP8.87□□□□□ -0.99
HIF1A-209ENST00000556827 RAD18Q9NS91 495 aa8.87□□□□□ -0.99
HIF1A-209ENST00000556827 SMARCA2P51531 1590 aa8.86□□□□□ -0.99
HIF1A-209ENST00000556827 NFKBIBQ15653 356 aa8.86□□□□□ -0.99
HIF1A-209ENST00000556827 AKAP4Q5JQC9 854 aa8.86□□□□□ -0.99
HIF1A-209ENST00000556827 PRPF40BQ6NWY9 871 aaKnown RBP8.86□□□□□ -0.99
HIF1A-209ENST00000556827 INTS5Q6P9B9 1019 aaKnown RBP8.86□□□□□ -0.99
HIF1A-209ENST00000556827 EPS8L3Q8TE67 593 aaKnown RBP8.86□□□□□ -0.99
HIF1A-209ENST00000556827 TRIM56Q9BRZ2 755 aaKnown RBP8.86□□□□□ -0.99
HIF1A-209ENST00000556827 TMEM238LA0A1B0GVL6 79 aa8.85□□□□□ -0.99
HIF1A-209ENST00000556827 KIAA1324LA8MWY0 1029 aaPredicted RBP8.85□□□□□ -0.99
HIF1A-209ENST00000556827 MED26O95402 600 aa8.85□□□□□ -0.99
HIF1A-209ENST00000556827 CTSBP07858 339 aa8.85□□□□□ -0.99
HIF1A-209ENST00000556827 PTPN12Q05209 780 aaKnown RBP8.85□□□□□ -0.99
HIF1A-209ENST00000556827 GRM2Q14416 872 aa8.85□□□□□ -0.99
HIF1A-209ENST00000556827 PDE3AQ14432 1141 aa8.85□□□□□ -0.99
HIF1A-209ENST00000556827 CDPF1Q6NVV7 123 aa8.85□□□□□ -0.99
HIF1A-209ENST00000556827 ATG3Q9NT62 314 aa8.85□□□□□ -0.99
HIF1A-209ENST00000556827 NLRP2Q9NX02 1062 aa8.85□□□□□ -0.99
HIF1A-209ENST00000556827 AP4E1Q9UPM8 1137 aa8.85□□□□□ -0.99
HIF1A-209ENST00000556827 PRR19A6NJB7 356 aa8.84□□□□□ -0.99
HIF1A-209ENST00000556827 RAB6AP20340 208 aa8.84□□□□□ -0.99
HIF1A-209ENST00000556827 AP3B2Q13367 1082 aa8.84□□□□□ -0.99
HIF1A-209ENST00000556827 CCDC27Q2M243 656 aa8.84□□□□□ -0.99
HIF1A-209ENST00000556827 TMCO4Q5TGY1 634 aa8.84□□□□□ -0.99
HIF1A-209ENST00000556827 ECEL1O95672 775 aa8.83□□□□□ -1
HIF1A-209ENST00000556827 RPS26P11Q5JNZ5 115 aaPredicted RBP8.83□□□□□ -1
HIF1A-209ENST00000556827 DTHD1Q6ZMT9 781 aa8.83□□□□□ -1
HIF1A-209ENST00000556827 DYMQ7RTS9 669 aa8.83□□□□□ -1
HIF1A-209ENST00000556827 OSBPL1AQ9BXW6 950 aa8.83□□□□□ -1
HIF1A-209ENST00000556827 ACTL7BQ9Y614 415 aa8.83□□□□□ -1
HIF1A-209ENST00000556827 BAZ1BQ9UIG0 1483 aaKnown RBP8.83□□□□□ -1
HIF1A-209ENST00000556827 HMGXB3Q12766 1538 aa8.82□□□□□ -1
HIF1A-209ENST00000556827 ZNF157P51786 506 aaPredicted RBP8.82□□□□□ -1
HIF1A-209ENST00000556827 ASB16Q96NS5 453 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms