RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 RFX5P48382 616 aaPredicted RBP11.91□□□□□ -0.5
MARK3-211ENST00000556744 HIRAP54198 1017 aaPredicted RBP11.91□□□□□ -0.5
MARK3-211ENST00000556744 PPP4R3BQ5MIZ7 849 aa11.91□□□□□ -0.5
MARK3-211ENST00000556744 AGBL3Q8NEM8 1001 aa11.91□□□□□ -0.5
MARK3-211ENST00000556744 ZNF594Q96JF6 807 aaPredicted RBP11.91□□□□□ -0.5
MARK3-211ENST00000556744 ADAM33Q9BZ11 813 aa11.91□□□□□ -0.5
MARK3-211ENST00000556744 COA1Q9GZY4 146 aa11.91□□□□□ -0.5
MARK3-211ENST00000556744 CNOT7Q9UIV1 285 aaKnown RBP11.91□□□□□ -0.5
MARK3-211ENST00000556744 CLCN1P35523 988 aa11.9□□□□□ -0.5
MARK3-211ENST00000556744 ZNF280AP59817 542 aaPredicted RBP11.9□□□□□ -0.5
MARK3-211ENST00000556744 RSBN1LQ6PCB5 846 aaPredicted RBP11.9□□□□□ -0.5
MARK3-211ENST00000556744 CNTROBQ8N137 903 aa11.9□□□□□ -0.5
MARK3-211ENST00000556744 HDAC5Q9UQL6 1122 aa11.9□□□□□ -0.5
MARK3-211ENST00000556744 CHMP3Q9Y3E7 222 aa11.9□□□□□ -0.5
MARK3-211ENST00000556744 MROH5Q6ZUA9 1318 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 TAF5LO75529 589 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 IL1R1P14778 569 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 KLRK1P26718 216 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 MMP14P50281 582 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 UBE4AQ14139 1066 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 EAPPQ56P03 285 aaPredicted RBP11.89□□□□□ -0.51
MARK3-211ENST00000556744 DACT2Q5SW24 774 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 STRIP1Q5VSL9 837 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 PADI6Q6TGC4 694 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 VGLL2Q8N8G2 317 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 PUS3Q9BZE2 481 aaKnown RBP11.89□□□□□ -0.51
MARK3-211ENST00000556744 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
MARK3-211ENST00000556744 SHTN1A0MZ66 631 aa11.88□□□□□ -0.51
MARK3-211ENST00000556744 H7C1D1 291 aa11.88□□□□□ -0.51
MARK3-211ENST00000556744 SNAP23O00161 211 aa11.88□□□□□ -0.51
MARK3-211ENST00000556744 UBTFL1P0CB47 393 aaPredicted RBP11.88□□□□□ -0.51
MARK3-211ENST00000556744 PTPN12Q05209 780 aaKnown RBP11.88□□□□□ -0.51
MARK3-211ENST00000556744 MTX1Q13505 466 aa11.88□□□□□ -0.51
MARK3-211ENST00000556744 TAF7LQ5H9L4 462 aa11.88□□□□□ -0.51
MARK3-211ENST00000556744 HELBQ8NG08 1087 aaPredicted RBP11.88□□□□□ -0.51
MARK3-211ENST00000556744 TRPM4Q8TD43 1214 aa11.88□□□□□ -0.51
MARK3-211ENST00000556744 MEIS3Q99687 375 aa11.88□□□□□ -0.51
MARK3-211ENST00000556744 CD209Q9NNX6 404 aa11.88□□□□□ -0.51
MARK3-211ENST00000556744 CNNM1Q9NRU3 951 aa11.88□□□□□ -0.51
MARK3-211ENST00000556744 GNAI3P08754 354 aa11.87□□□□□ -0.51
MARK3-211ENST00000556744 LRRC24Q50LG9 513 aa11.87□□□□□ -0.51
MARK3-211ENST00000556744 ZKSCAN2Q63HK3 967 aa11.87□□□□□ -0.51
MARK3-211ENST00000556744 MAP1SQ66K74 1059 aaPredicted RBP11.87□□□□□ -0.51
MARK3-211ENST00000556744 GPCPD1Q9NPB8 672 aa11.87□□□□□ -0.51
MARK3-211ENST00000556744 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
MARK3-211ENST00000556744 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 PCNTO95613 3336 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 EYA2O00167 538 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 CIAO1O76071 339 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 PDE8BO95263 885 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 EGFRP00533 1210 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 FGFR2P21802 821 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 KCNJ4P48050 445 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 PRSS12P56730 875 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 FKBP1AP62942 108 aaKnown RBP11.86□□□□□ -0.51
MARK3-211ENST00000556744 ATG9AQ7Z3C6 839 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 JMYQ8N9B5 988 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 KLRG1Q96E93 195 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 FAM84BQ96KN1 310 aaPredicted RBP11.86□□□□□ -0.51
MARK3-211ENST00000556744 COPRSQ9NQ92 184 aa11.86□□□□□ -0.51
MARK3-211ENST00000556744 LRRFIP2Q9Y608 721 aaKnown RBP11.86□□□□□ -0.51
MARK3-211ENST00000556744 POLR2AP24928 1970 aaKnown RBP11.86□□□□□ -0.51
MARK3-211ENST00000556744 SASH1O94885 1247 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 USP17L8P0C7I0 530 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 HOXB1P14653 301 aaPredicted RBP11.85□□□□□ -0.51
MARK3-211ENST00000556744 HTRA3P83110 453 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 TTLL5Q6EMB2 1281 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 SAMD7Q7Z3H4 446 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 FBXO33Q7Z6M2 555 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 METTL3Q86U44 580 aaKnown RBP11.85□□□□□ -0.51
MARK3-211ENST00000556744 TTC13Q8NBP0 860 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 TDRD7Q8NHU6 1098 aaKnown RBP11.85□□□□□ -0.51
MARK3-211ENST00000556744 KLHDC4Q8TBB5 520 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 FRAT1Q92837 279 aaPredicted RBP11.85□□□□□ -0.51
MARK3-211ENST00000556744 TMUB1Q9BVT8 246 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 ADGRG1Q9Y653 693 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 TRPM7Q96QT4 1865 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 FAM205AQ6ZU69 1335 aa11.85□□□□□ -0.51
MARK3-211ENST00000556744 TMEM88BA6NKF7 163 aa11.84□□□□□ -0.51
MARK3-211ENST00000556744 MDM2Q00987 491 aaPredicted RBP11.84□□□□□ -0.51
MARK3-211ENST00000556744 CDC37L1Q7L3B6 337 aa11.84□□□□□ -0.51
MARK3-211ENST00000556744 ZNF804AQ7Z570 1209 aa11.84□□□□□ -0.51
MARK3-211ENST00000556744 TMEM57Q8N5G2 664 aa11.84□□□□□ -0.51
MARK3-211ENST00000556744 ZBED3Q96IU2 234 aaPredicted RBP11.84□□□□□ -0.51
MARK3-211ENST00000556744 ZBTB7BO15156 539 aaPredicted RBP11.83□□□□□ -0.52
MARK3-211ENST00000556744 PLIN1O60240 522 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 RLBP1P12271 317 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 HIBADHP31937 336 aaKnown RBP11.83□□□□□ -0.52
MARK3-211ENST00000556744 GTF2IP78347 998 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 KIF4BQ2VIQ3 1234 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 TBC1D10BQ4KMP7 808 aaPredicted RBP11.83□□□□□ -0.52
MARK3-211ENST00000556744 METTL24Q5JXM2 366 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 CST9Q5W186 159 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 DZIP1LQ8IYY4 767 aaKnown RBP11.83□□□□□ -0.52
MARK3-211ENST00000556744 CERS5Q8N5B7 392 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 MTMR14Q8NCE2 650 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 PXYLP1Q8TE99 480 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms