RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TNNI2P48788 182 aa17.75■□□□□ 0.43
ACTN1-219ENST00000556432 FKBP5Q13451 457 aaPredicted RBP17.75■□□□□ 0.43
ACTN1-219ENST00000556432 CASP7P55210 303 aa17.74■□□□□ 0.43
ACTN1-219ENST00000556432 LACTBP83111 547 aaPredicted RBP17.74■□□□□ 0.43
ACTN1-219ENST00000556432 DZIP1LQ8IYY4 767 aaKnown RBP17.74■□□□□ 0.43
ACTN1-219ENST00000556432 DNAAF4Q8WXU2 420 aa17.74■□□□□ 0.43
ACTN1-219ENST00000556432 SERPINA10Q9UK55 444 aa17.74■□□□□ 0.43
ACTN1-219ENST00000556432 TLR2O60603 784 aa17.73■□□□□ 0.43
ACTN1-219ENST00000556432 CETPP11597 493 aa17.73■□□□□ 0.43
ACTN1-219ENST00000556432 FLIIQ13045 1269 aa17.73■□□□□ 0.43
ACTN1-219ENST00000556432 TWISTNBQ3B726 338 aaPredicted RBP17.73■□□□□ 0.43
ACTN1-219ENST00000556432 LINS1Q8NG48 757 aa17.73■□□□□ 0.43
ACTN1-219ENST00000556432 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.73■□□□□ 0.43
ACTN1-219ENST00000556432 TEPSINQ96N21 525 aa17.73■□□□□ 0.43
ACTN1-219ENST00000556432 CNNM1Q9NRU3 951 aa17.73■□□□□ 0.43
ACTN1-219ENST00000556432 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
ACTN1-219ENST00000556432 ZSWIM8A7E2V4 1837 aa17.71■□□□□ 0.43
ACTN1-219ENST00000556432 SPDYE5A6NIY4 337 aa17.71■□□□□ 0.43
ACTN1-219ENST00000556432 GNRH1P01148 92 aa17.71■□□□□ 0.43
ACTN1-219ENST00000556432 CRKP46108 304 aa17.71■□□□□ 0.43
ACTN1-219ENST00000556432 SNAPC2Q13487 334 aa17.71■□□□□ 0.43
ACTN1-219ENST00000556432 CCDC57Q2TAC2 916 aa17.71■□□□□ 0.43
ACTN1-219ENST00000556432 LDHAL6AQ6ZMR3 332 aa17.71■□□□□ 0.43
ACTN1-219ENST00000556432 ZNF594Q96JF6 807 aaPredicted RBP17.71■□□□□ 0.43
ACTN1-219ENST00000556432 WRNIP1Q96S55 665 aa17.71■□□□□ 0.43
ACTN1-219ENST00000556432 A0A1B0GUL6 1792 aa17.71■□□□□ 0.43
ACTN1-219ENST00000556432 FAM205AQ6ZU69 1335 aa17.71■□□□□ 0.42
ACTN1-219ENST00000556432 SZT2Q5T011 3432 aa17.7■□□□□ 0.42
ACTN1-219ENST00000556432 BTBD19C9JJ37 291 aa17.7■□□□□ 0.42
ACTN1-219ENST00000556432 GYG1P46976 350 aa17.7■□□□□ 0.42
ACTN1-219ENST00000556432 PRMT2P55345 433 aa17.7■□□□□ 0.42
ACTN1-219ENST00000556432 MTFR1Q15390 333 aa17.7■□□□□ 0.42
ACTN1-219ENST00000556432 ERO1BQ86YB8 467 aa17.7■□□□□ 0.42
ACTN1-219ENST00000556432 BIN2Q9UBW5 565 aaPredicted RBP17.7■□□□□ 0.42
ACTN1-219ENST00000556432 DLL1O00548 723 aa17.69■□□□□ 0.42
ACTN1-219ENST00000556432 HIBADHP31937 336 aaKnown RBP17.69■□□□□ 0.42
ACTN1-219ENST00000556432 FOXO4P98177 505 aa17.69■□□□□ 0.42
ACTN1-219ENST00000556432 LMBR1LQ6UX01 489 aa17.69■□□□□ 0.42
ACTN1-219ENST00000556432 SLC17A8Q8NDX2 589 aa17.69■□□□□ 0.42
ACTN1-219ENST00000556432 NKX2-3Q8TAU0 364 aa17.69■□□□□ 0.42
ACTN1-219ENST00000556432 RAET1EQ8TD07 263 aa17.69■□□□□ 0.42
ACTN1-219ENST00000556432 SHISA4Q96DD7 197 aa17.69■□□□□ 0.42
ACTN1-219ENST00000556432 HTATIP2Q9BUP3 242 aa17.69■□□□□ 0.42
ACTN1-219ENST00000556432 ZCCHC17Q9NP64 241 aaKnown RBP17.69■□□□□ 0.42
ACTN1-219ENST00000556432 TMOD2Q9NZR1 351 aa17.69■□□□□ 0.42
ACTN1-219ENST00000556432 SNCAIPQ9Y6H5 919 aa17.69■□□□□ 0.42
ACTN1-219ENST00000556432 IRF6O14896 467 aa17.68■□□□□ 0.42
ACTN1-219ENST00000556432 HOXD10P28358 340 aa17.68■□□□□ 0.42
ACTN1-219ENST00000556432 PSMC4P43686 418 aa17.68■□□□□ 0.42
ACTN1-219ENST00000556432 RANBP2P49792 3224 aaKnown RBP17.68■□□□□ 0.42
ACTN1-219ENST00000556432 CACNB3P54284 484 aa17.68■□□□□ 0.42
ACTN1-219ENST00000556432 CHAF1AQ13111 956 aaPredicted RBP17.68■□□□□ 0.42
ACTN1-219ENST00000556432 VPS37DQ86XT2 251 aa17.68■□□□□ 0.42
ACTN1-219ENST00000556432 TDRD7Q8NHU6 1098 aaKnown RBP17.68■□□□□ 0.42
ACTN1-219ENST00000556432 ARAP2Q8WZ64 1704 aa17.68■□□□□ 0.42
ACTN1-219ENST00000556432 ZKSCAN4Q969J2 545 aaPredicted RBP17.68■□□□□ 0.42
ACTN1-219ENST00000556432 CPA4Q9UI42 421 aa17.68■□□□□ 0.42
ACTN1-219ENST00000556432 FRAT2O75474 233 aaPredicted RBP17.67■□□□□ 0.42
ACTN1-219ENST00000556432 FMNL1O95466 1100 aaPredicted RBP17.67■□□□□ 0.42
ACTN1-219ENST00000556432 GRK4P32298 578 aa17.67■□□□□ 0.42
ACTN1-219ENST00000556432 HOOK2Q96ED9 719 aa17.67■□□□□ 0.42
ACTN1-219ENST00000556432 SRRDQ9UH36 339 aa17.67■□□□□ 0.42
ACTN1-219ENST00000556432 NR2E3Q9Y5X4 410 aa17.67■□□□□ 0.42
ACTN1-219ENST00000556432 CCL5P13501 91 aa17.66■□□□□ 0.42
ACTN1-219ENST00000556432 PPIL2Q13356 520 aa17.66■□□□□ 0.42
ACTN1-219ENST00000556432 UBE4AQ14139 1066 aa17.66■□□□□ 0.42
ACTN1-219ENST00000556432 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.66■□□□□ 0.42
ACTN1-219ENST00000556432 TRIM47Q96LD4 638 aa17.66■□□□□ 0.42
ACTN1-219ENST00000556432 RNF208Q9H0X6 261 aa17.66■□□□□ 0.42
ACTN1-219ENST00000556432 IQSEC3Q9UPP2 1182 aaPredicted RBP17.66■□□□□ 0.42
ACTN1-219ENST00000556432 RIPOR2Q9Y4F9 1068 aa17.66■□□□□ 0.42
ACTN1-219ENST00000556432 DCAF15Q66K64 600 aa17.65■□□□□ 0.42
ACTN1-219ENST00000556432 TEKT1Q969V4 418 aa17.65■□□□□ 0.42
ACTN1-219ENST00000556432 FAM84BQ96KN1 310 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-219ENST00000556432 MYPNQ86TC9 1320 aa17.65■□□□□ 0.42
ACTN1-219ENST00000556432 F6X3S4 739 aa17.64■□□□□ 0.41
ACTN1-219ENST00000556432 OSBPP22059 807 aa17.64■□□□□ 0.41
ACTN1-219ENST00000556432 GJA8P48165 433 aa17.64■□□□□ 0.41
ACTN1-219ENST00000556432 UBXN2AP68543 259 aa17.64■□□□□ 0.41
ACTN1-219ENST00000556432 EPHA10Q5JZY3 1008 aa17.64■□□□□ 0.41
ACTN1-219ENST00000556432 C17orf99Q6UX52 265 aa17.64■□□□□ 0.41
ACTN1-219ENST00000556432 PDHXO00330 501 aa17.63■□□□□ 0.41
ACTN1-219ENST00000556432 FARP2O94887 1054 aaPredicted RBP17.63■□□□□ 0.41
ACTN1-219ENST00000556432 GJB1P08034 283 aa17.63■□□□□ 0.41
ACTN1-219ENST00000556432 CTGFP29279 349 aa17.63■□□□□ 0.41
ACTN1-219ENST00000556432 GRIK5Q16478 980 aa17.63■□□□□ 0.41
ACTN1-219ENST00000556432 GRM8O00222 908 aa17.62■□□□□ 0.41
ACTN1-219ENST00000556432 MIGA2Q7L4E1 593 aa17.62■□□□□ 0.41
ACTN1-219ENST00000556432 ANKRD23Q86SG2 305 aa17.62■□□□□ 0.41
ACTN1-219ENST00000556432 TBC1D22AQ8WUA7 517 aa17.62■□□□□ 0.41
ACTN1-219ENST00000556432 ZNF341Q9BYN7 854 aa17.62■□□□□ 0.41
ACTN1-219ENST00000556432 PRKRIP1Q9H875 184 aaPredicted RBP17.62■□□□□ 0.41
ACTN1-219ENST00000556432 C9orf78Q9NZ63 289 aaPredicted RBP17.62■□□□□ 0.41
ACTN1-219ENST00000556432 HDLBPQ00341 1268 aaKnown RBP17.61■□□□□ 0.41
ACTN1-219ENST00000556432 PPATQ06203 517 aa17.61■□□□□ 0.41
ACTN1-219ENST00000556432 CAVIN4Q5BKX8 364 aa17.61■□□□□ 0.41
ACTN1-219ENST00000556432 BEND3Q5T5X7 828 aa17.61■□□□□ 0.41
ACTN1-219ENST00000556432 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
ACTN1-219ENST00000556432 PUS3Q9BZE2 481 aaKnown RBP17.61■□□□□ 0.41
ACTN1-219ENST00000556432 ZBTB7BO15156 539 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms