RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 SRCIN1Q9C0H9 1055 aa19.51■□□□□ 0.71
SUPT16H-205ENST00000556217 ELP3Q9H9T3 547 aa19.51■□□□□ 0.71
SUPT16H-205ENST00000556217 SP3Q02447 781 aa19.5■□□□□ 0.71
SUPT16H-205ENST00000556217 VPS37DQ86XT2 251 aa19.5■□□□□ 0.71
SUPT16H-205ENST00000556217 DZIP1LQ8IYY4 767 aaKnown RBP19.5■□□□□ 0.71
SUPT16H-205ENST00000556217 CD99L2Q8TCZ2 262 aa19.5■□□□□ 0.71
SUPT16H-205ENST00000556217 OPTNQ96CV9 577 aa19.5■□□□□ 0.71
SUPT16H-205ENST00000556217 FAM84BQ96KN1 310 aaPredicted RBP19.5■□□□□ 0.71
SUPT16H-205ENST00000556217 TDRD3Q9H7E2 651 aaKnown RBP19.5■□□□□ 0.71
SUPT16H-205ENST00000556217 EFCC1Q9HA90 598 aa19.5■□□□□ 0.71
SUPT16H-205ENST00000556217 MROH5Q6ZUA9 1318 aa19.5■□□□□ 0.71
SUPT16H-205ENST00000556217 ARHGEF6Q15052 776 aa19.49■□□□□ 0.71
SUPT16H-205ENST00000556217 PTPN18Q99952 460 aa19.49■□□□□ 0.71
SUPT16H-205ENST00000556217 CRKP46108 304 aa19.48■□□□□ 0.71
SUPT16H-205ENST00000556217 CSADQ9Y600 493 aa19.48■□□□□ 0.71
SUPT16H-205ENST00000556217 TCP10L2B9ZVM9 353 aa19.47■□□□□ 0.71
SUPT16H-205ENST00000556217 ANP32CO43423 234 aa19.47■□□□□ 0.71
SUPT16H-205ENST00000556217 GTF2A2P52657 109 aa19.47■□□□□ 0.71
SUPT16H-205ENST00000556217 TBC1D22AQ8WUA7 517 aa19.47■□□□□ 0.71
SUPT16H-205ENST00000556217 TEPSINQ96N21 525 aa19.47■□□□□ 0.71
SUPT16H-205ENST00000556217 PUS3Q9BZE2 481 aaKnown RBP19.47■□□□□ 0.71
SUPT16H-205ENST00000556217 FRAT2O75474 233 aaPredicted RBP19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 WDHD1O75717 1129 aaPredicted RBP19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 MAP3K9P80192 1104 aa19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 HDLBPQ00341 1268 aaKnown RBP19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 CAVIN4Q5BKX8 364 aa19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 SUCLG2Q96I99 432 aa19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 MS4A4AQ96JQ5 239 aa19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 TMEM39BQ9GZU3 492 aa19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 ZFYVE28Q9HCC9 887 aa19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 SPINK5Q9NQ38 1064 aaPredicted RBP19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 RIPOR2Q9Y4F9 1068 aa19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 BRCA2P51587 3418 aa19.46■□□□□ 0.71
SUPT16H-205ENST00000556217 CCL15-CCL14A0A0B4J2E2 113 aa19.45■□□□□ 0.7
SUPT16H-205ENST00000556217 VGLL4Q14135 290 aa19.45■□□□□ 0.7
SUPT16H-205ENST00000556217 TAF1CQ15572 869 aaPredicted RBP19.45■□□□□ 0.7
SUPT16H-205ENST00000556217 CCL15Q16663 113 aa19.45■□□□□ 0.7
SUPT16H-205ENST00000556217 CHAF1AQ13111 956 aaPredicted RBP19.44■□□□□ 0.7
SUPT16H-205ENST00000556217 FBXO33Q7Z6M2 555 aa19.44■□□□□ 0.7
SUPT16H-205ENST00000556217 NBPF11Q86T75 865 aa19.44■□□□□ 0.7
SUPT16H-205ENST00000556217 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.44■□□□□ 0.7
SUPT16H-205ENST00000556217 BRI3BPQ8WY22 251 aa19.44■□□□□ 0.7
SUPT16H-205ENST00000556217 TEKT1Q969V4 418 aa19.44■□□□□ 0.7
SUPT16H-205ENST00000556217 HOOK2Q96ED9 719 aa19.44■□□□□ 0.7
SUPT16H-205ENST00000556217 KAZALD1Q96I82 304 aa19.44■□□□□ 0.7
SUPT16H-205ENST00000556217 TMOD2Q9NZR1 351 aa19.44■□□□□ 0.7
SUPT16H-205ENST00000556217 UTYO14607 1347 aa19.44■□□□□ 0.7
SUPT16H-205ENST00000556217 NBPF7P0C2Y1 421 aaPredicted RBP19.43■□□□□ 0.7
SUPT16H-205ENST00000556217 METTL24Q5JXM2 366 aa19.43■□□□□ 0.7
SUPT16H-205ENST00000556217 CDAN1Q8IWY9 1227 aa19.43■□□□□ 0.7
SUPT16H-205ENST00000556217 OTUD5Q96G74 571 aa19.43■□□□□ 0.7
SUPT16H-205ENST00000556217 ZNF333Q96JL9 665 aa19.43■□□□□ 0.7
SUPT16H-205ENST00000556217 BICC1Q9H694 974 aaKnown RBP19.43■□□□□ 0.7
SUPT16H-205ENST00000556217 IQSEC3Q9UPP2 1182 aaPredicted RBP19.43■□□□□ 0.7
SUPT16H-205ENST00000556217 SZT2Q5T011 3432 aa19.43■□□□□ 0.7
SUPT16H-205ENST00000556217 H0YGN5 161 aa19.42■□□□□ 0.7
SUPT16H-205ENST00000556217 CNKSR2Q8WXI2 1034 aa19.42■□□□□ 0.7
SUPT16H-205ENST00000556217 MAST3O60307 1309 aa19.42■□□□□ 0.7
SUPT16H-205ENST00000556217 SPDYE5A6NIY4 337 aa19.41■□□□□ 0.7
SUPT16H-205ENST00000556217 DLL1O00548 723 aa19.41■□□□□ 0.7
SUPT16H-205ENST00000556217 PDE8BO95263 885 aa19.41■□□□□ 0.7
SUPT16H-205ENST00000556217 CETPP11597 493 aa19.41■□□□□ 0.7
SUPT16H-205ENST00000556217 SLC4A8Q2Y0W8 1093 aa19.41■□□□□ 0.7
SUPT16H-205ENST00000556217 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
SUPT16H-205ENST00000556217 SLC9C1Q4G0N8 1177 aa19.41■□□□□ 0.7
SUPT16H-205ENST00000556217 MRIQ9BWK5 157 aa19.41■□□□□ 0.7
SUPT16H-205ENST00000556217 SUGT1Q9Y2Z0 365 aa19.41■□□□□ 0.7
SUPT16H-205ENST00000556217 GRIK5Q16478 980 aa19.4■□□□□ 0.7
SUPT16H-205ENST00000556217 LRRC24Q50LG9 513 aa19.4■□□□□ 0.7
SUPT16H-205ENST00000556217 FKBP1CQ5VVH2 108 aa19.4■□□□□ 0.7
SUPT16H-205ENST00000556217 FAM83AQ86UY5 434 aa19.4■□□□□ 0.7
SUPT16H-205ENST00000556217 ERO1BQ86YB8 467 aa19.4■□□□□ 0.7
SUPT16H-205ENST00000556217 ZDHHC15Q96MV8 337 aa19.4■□□□□ 0.7
SUPT16H-205ENST00000556217 ZCCHC17Q9NP64 241 aaKnown RBP19.4■□□□□ 0.7
SUPT16H-205ENST00000556217 MYH13Q9UKX3 1938 aa19.4■□□□□ 0.7
SUPT16H-205ENST00000556217 CACNB3P54284 484 aa19.39■□□□□ 0.69
SUPT16H-205ENST00000556217 KIF22Q14807 665 aa19.39■□□□□ 0.69
SUPT16H-205ENST00000556217 DCAF15Q66K64 600 aa19.39■□□□□ 0.69
SUPT16H-205ENST00000556217 FAM43AQ8N2R8 423 aa19.39■□□□□ 0.69
SUPT16H-205ENST00000556217 WRNIP1Q96S55 665 aa19.39■□□□□ 0.69
SUPT16H-205ENST00000556217 CAP1Q01518 475 aa19.38■□□□□ 0.69
SUPT16H-205ENST00000556217 SNAPC2Q13487 334 aa19.38■□□□□ 0.69
SUPT16H-205ENST00000556217 ANKRD44Q8N8A2 993 aa19.38■□□□□ 0.69
SUPT16H-205ENST00000556217 VGLL2Q8N8G2 317 aa19.38■□□□□ 0.69
SUPT16H-205ENST00000556217 SLC17A8Q8NDX2 589 aa19.38■□□□□ 0.69
SUPT16H-205ENST00000556217 KIF16BQ96L93 1317 aa19.38■□□□□ 0.69
SUPT16H-205ENST00000556217 PTCH2Q9Y6C5 1203 aa19.38■□□□□ 0.69
SUPT16H-205ENST00000556217 A0A0C4DFX4 3053 aa19.37■□□□□ 0.69
SUPT16H-205ENST00000556217 PTPRCP08575 1304 aa19.37■□□□□ 0.69
SUPT16H-205ENST00000556217 TLR2O60603 784 aa19.37■□□□□ 0.69
SUPT16H-205ENST00000556217 IFIT1P09914 478 aaKnown RBP19.37■□□□□ 0.69
SUPT16H-205ENST00000556217 BCAMP50895 628 aa19.37■□□□□ 0.69
SUPT16H-205ENST00000556217 PUM3Q15397 648 aaKnown RBP19.37■□□□□ 0.69
SUPT16H-205ENST00000556217 FAM9BQ8IZU0 186 aa19.37■□□□□ 0.69
SUPT16H-205ENST00000556217 SNCAIPQ9Y6H5 919 aa19.37■□□□□ 0.69
SUPT16H-205ENST00000556217 RPAP1Q9BWH6 1393 aaPredicted RBP19.36■□□□□ 0.69
SUPT16H-205ENST00000556217 AK9Q5TCS8 1911 aa19.36■□□□□ 0.69
SUPT16H-205ENST00000556217 GNRH1P01148 92 aa19.36■□□□□ 0.69
SUPT16H-205ENST00000556217 PPIL2Q13356 520 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms