RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 IQSEC3Q9UPP2 1182 aaPredicted RBP23.63■■□□□ 1.37
CDKN3-209ENST00000556102 FKTNO75072 461 aa23.62■■□□□ 1.37
CDKN3-209ENST00000556102 IFNL1Q8IU54 200 aa23.62■■□□□ 1.37
CDKN3-209ENST00000556102 ANKRD13AQ8IZ07 590 aa23.62■■□□□ 1.37
CDKN3-209ENST00000556102 KLHDC4Q8TBB5 520 aa23.62■■□□□ 1.37
CDKN3-209ENST00000556102 R3HDMLQ9H3Y0 253 aa23.62■■□□□ 1.37
CDKN3-209ENST00000556102 PDE4DIPQ5VU43 2346 aa23.61■■□□□ 1.37
CDKN3-209ENST00000556102 FRAT2O75474 233 aaPredicted RBP23.61■■□□□ 1.37
CDKN3-209ENST00000556102 CHAF1AQ13111 956 aaPredicted RBP23.61■■□□□ 1.37
CDKN3-209ENST00000556102 HDLBPQ00341 1268 aaKnown RBP23.6■■□□□ 1.37
CDKN3-209ENST00000556102 GRIK5Q16478 980 aa23.6■■□□□ 1.37
CDKN3-209ENST00000556102 TNRC18O15417 2968 aaPredicted RBP23.6■■□□□ 1.37
CDKN3-209ENST00000556102 KIF16BQ96L93 1317 aa23.59■■□□□ 1.37
CDKN3-209ENST00000556102 MYH13Q9UKX3 1938 aa23.59■■□□□ 1.37
CDKN3-209ENST00000556102 IGF2BP3O00425 579 aaKnown RBP eCLIP23.59■■□□□ 1.37
CDKN3-209ENST00000556102 TNNI2P48788 182 aa23.59■■□□□ 1.37
CDKN3-209ENST00000556102 TEPSINQ96N21 525 aa23.59■■□□□ 1.37
CDKN3-209ENST00000556102 SMC4Q9NTJ3 1288 aa23.59■■□□□ 1.37
CDKN3-209ENST00000556102 TCP10L2B9ZVM9 353 aa23.58■■□□□ 1.37
CDKN3-209ENST00000556102 IFIT1P09914 478 aaKnown RBP23.58■■□□□ 1.37
CDKN3-209ENST00000556102 FGFR2P21802 821 aa23.58■■□□□ 1.37
CDKN3-209ENST00000556102 GJA5P36382 358 aa23.58■■□□□ 1.37
CDKN3-209ENST00000556102 BCAMP50895 628 aa23.58■■□□□ 1.37
CDKN3-209ENST00000556102 PUM3Q15397 648 aaKnown RBP23.58■■□□□ 1.37
CDKN3-209ENST00000556102 FBXO46Q6PJ61 603 aaPredicted RBP23.58■■□□□ 1.37
CDKN3-209ENST00000556102 CDCA7LQ96GN5 454 aa23.58■■□□□ 1.37
CDKN3-209ENST00000556102 EYA2O00167 538 aa23.57■■□□□ 1.36
CDKN3-209ENST00000556102 RFX5P48382 616 aaPredicted RBP23.57■■□□□ 1.36
CDKN3-209ENST00000556102 CDAN1Q8IWY9 1227 aa23.57■■□□□ 1.36
CDKN3-209ENST00000556102 TEKT1Q969V4 418 aa23.57■■□□□ 1.36
CDKN3-209ENST00000556102 OTUD7BQ6GQQ9 843 aa23.56■■□□□ 1.36
CDKN3-209ENST00000556102 TRMT2AQ8IZ69 625 aaKnown RBP23.56■■□□□ 1.36
CDKN3-209ENST00000556102 MRIQ9BWK5 157 aa23.56■■□□□ 1.36
CDKN3-209ENST00000556102 TMEM39BQ9GZU3 492 aa23.56■■□□□ 1.36
CDKN3-209ENST00000556102 ELP3Q9H9T3 547 aa23.56■■□□□ 1.36
CDKN3-209ENST00000556102 SUGT1Q9Y2Z0 365 aa23.56■■□□□ 1.36
CDKN3-209ENST00000556102 OPTNQ96CV9 577 aa23.55■■□□□ 1.36
CDKN3-209ENST00000556102 MAST3O60307 1309 aa23.55■■□□□ 1.36
CDKN3-209ENST00000556102 TESPA1A2RU30 521 aaPredicted RBP23.54■■□□□ 1.36
CDKN3-209ENST00000556102 CT47B1P0C2W7 299 aaPredicted RBP23.54■■□□□ 1.36
CDKN3-209ENST00000556102 SLC5A1P13866 664 aa23.54■■□□□ 1.36
CDKN3-209ENST00000556102 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.54■■□□□ 1.36
CDKN3-209ENST00000556102 ZDHHC15Q96MV8 337 aa23.54■■□□□ 1.36
CDKN3-209ENST00000556102 UBTFL1P0CB47 393 aaPredicted RBP23.53■■□□□ 1.36
CDKN3-209ENST00000556102 MAP3K9P80192 1104 aa23.53■■□□□ 1.36
CDKN3-209ENST00000556102 LPIN2Q92539 896 aa23.53■■□□□ 1.36
CDKN3-209ENST00000556102 TMOD2Q9NZR1 351 aa23.53■■□□□ 1.36
CDKN3-209ENST00000556102 CACNB3P54284 484 aa23.52■■□□□ 1.36
CDKN3-209ENST00000556102 ATG9AQ7Z3C6 839 aa23.52■■□□□ 1.36
CDKN3-209ENST00000556102 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.52■■□□□ 1.36
CDKN3-209ENST00000556102 PTPN18Q99952 460 aa23.52■■□□□ 1.36
CDKN3-209ENST00000556102 FBXO3Q9UK99 471 aa23.52■■□□□ 1.36
CDKN3-209ENST00000556102 CRHR2Q13324 411 aa23.51■■□□□ 1.35
CDKN3-209ENST00000556102 VGLL4Q14135 290 aa23.51■■□□□ 1.35
CDKN3-209ENST00000556102 FKBP1CQ5VVH2 108 aa23.51■■□□□ 1.35
CDKN3-209ENST00000556102 APOBEC3HQ6NTF7 200 aaKnown RBP23.51■■□□□ 1.35
CDKN3-209ENST00000556102 TRIM17Q9Y577 477 aa23.51■■□□□ 1.35
CDKN3-209ENST00000556102 CSADQ9Y600 493 aa23.51■■□□□ 1.35
CDKN3-209ENST00000556102 HHIPL2Q6UWX4 724 aa23.5■■□□□ 1.35
CDKN3-209ENST00000556102 OTOP1Q7RTM1 612 aa23.5■■□□□ 1.35
CDKN3-209ENST00000556102 FAM83AQ86UY5 434 aa23.5■■□□□ 1.35
CDKN3-209ENST00000556102 WDR66Q8TBY9 1149 aa23.5■■□□□ 1.35
CDKN3-209ENST00000556102 ERO1AQ96HE7 468 aa23.5■■□□□ 1.35
CDKN3-209ENST00000556102 MS4A4AQ96JQ5 239 aa23.5■■□□□ 1.35
CDKN3-209ENST00000556102 API5Q9BZZ5 524 aaKnown RBP23.5■■□□□ 1.35
CDKN3-209ENST00000556102 NOB1Q9ULX3 412 aaKnown RBP23.5■■□□□ 1.35
CDKN3-209ENST00000556102 CIAO1O76071 339 aa23.49■■□□□ 1.35
CDKN3-209ENST00000556102 CNKSR2Q8WXI2 1034 aa23.49■■□□□ 1.35
CDKN3-209ENST00000556102 HOOK2Q96ED9 719 aa23.48■■□□□ 1.35
CDKN3-209ENST00000556102 SIL1Q9H173 461 aa23.48■■□□□ 1.35
CDKN3-209ENST00000556102 HDAC5Q9UQL6 1122 aa23.48■■□□□ 1.35
CDKN3-209ENST00000556102 RPAP1Q9BWH6 1393 aaPredicted RBP23.48■■□□□ 1.35
CDKN3-209ENST00000556102 GTF2A2P52657 109 aa23.47■■□□□ 1.35
CDKN3-209ENST00000556102 ATP2B3Q16720 1220 aa23.47■■□□□ 1.35
CDKN3-209ENST00000556102 CD99L2Q8TCZ2 262 aa23.47■■□□□ 1.35
CDKN3-209ENST00000556102 BRI3BPQ8WY22 251 aa23.47■■□□□ 1.35
CDKN3-209ENST00000556102 CEP126Q9P2H0 1117 aa23.47■■□□□ 1.35
CDKN3-209ENST00000556102 HTTP42858 3142 aa23.46■■□□□ 1.35
CDKN3-209ENST00000556102 CCL15-CCL14A0A0B4J2E2 113 aa23.46■■□□□ 1.35
CDKN3-209ENST00000556102 SPDYE5A6NIY4 337 aa23.46■■□□□ 1.35
CDKN3-209ENST00000556102 CCL15Q16663 113 aa23.46■■□□□ 1.35
CDKN3-209ENST00000556102 OTUD5Q96G74 571 aa23.46■■□□□ 1.35
CDKN3-209ENST00000556102 LRRFIP2Q9Y608 721 aaKnown RBP23.46■■□□□ 1.35
CDKN3-209ENST00000556102 SLC34A2O95436 690 aa23.45■■□□□ 1.34
CDKN3-209ENST00000556102 SP3Q02447 781 aa23.45■■□□□ 1.34
CDKN3-209ENST00000556102 WRNIP1Q96S55 665 aa23.45■■□□□ 1.34
CDKN3-209ENST00000556102 GNL3LQ9NVN8 582 aaKnown RBP23.45■■□□□ 1.34
CDKN3-209ENST00000556102 SNCAIPQ9Y6H5 919 aa23.45■■□□□ 1.34
CDKN3-209ENST00000556102 AK9Q5TCS8 1911 aa23.44■■□□□ 1.34
CDKN3-209ENST00000556102 CCER2I3L3R5 266 aa23.44■■□□□ 1.34
CDKN3-209ENST00000556102 IL15P40933 162 aaPredicted RBP23.44■■□□□ 1.34
CDKN3-209ENST00000556102 DCAF15Q66K64 600 aa23.44■■□□□ 1.34
CDKN3-209ENST00000556102 DAGLAQ9Y4D2 1042 aa23.44■■□□□ 1.34
CDKN3-209ENST00000556102 PRDX5P30044 214 aa23.43■■□□□ 1.34
CDKN3-209ENST00000556102 TAF1CQ15572 869 aaPredicted RBP23.43■■□□□ 1.34
CDKN3-209ENST00000556102 ERO1BQ86YB8 467 aa23.43■■□□□ 1.34
CDKN3-209ENST00000556102 EFCC1Q9HA90 598 aa23.43■■□□□ 1.34
CDKN3-209ENST00000556102 ZFYVE28Q9HCC9 887 aa23.43■■□□□ 1.34
CDKN3-209ENST00000556102 PA2G4Q9UQ80 394 aaKnown RBP23.43■■□□□ 1.34
CDKN3-209ENST00000556102 PTPN22Q9Y2R2 807 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms