RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 RGMBQ6NW40 437 aa12.43□□□□□ -0.42
HNRNPC-219ENST00000555309 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
HNRNPC-219ENST00000555309 MTMR14Q8NCE2 650 aa12.43□□□□□ -0.42
HNRNPC-219ENST00000555309 TDRD3Q9H7E2 651 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-219ENST00000555309 VEZTQ9HBM0 779 aa12.43□□□□□ -0.42
HNRNPC-219ENST00000555309 CRKP46108 304 aa12.42□□□□□ -0.42
HNRNPC-219ENST00000555309 ZNF157P51786 506 aaPredicted RBP12.42□□□□□ -0.42
HNRNPC-219ENST00000555309 CACNB3P54284 484 aa12.42□□□□□ -0.42
HNRNPC-219ENST00000555309 HHIPL1Q96JK4 782 aa12.42□□□□□ -0.42
HNRNPC-219ENST00000555309 DEFB129Q9H1M3 183 aa12.42□□□□□ -0.42
HNRNPC-219ENST00000555309 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
HNRNPC-219ENST00000555309 HSPA8P11142 646 aaKnown RBP12.42□□□□□ -0.42
HNRNPC-219ENST00000555309 FTSJ3Q8IY81 847 aaKnown RBP12.42□□□□□ -0.42
HNRNPC-219ENST00000555309 ZNF70Q9UC06 446 aaPredicted RBP12.42□□□□□ -0.42
HNRNPC-219ENST00000555309 KIF23Q02241 960 aaPredicted RBP12.41□□□□□ -0.42
HNRNPC-219ENST00000555309 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
HNRNPC-219ENST00000555309 NBPF12Q5TAG4 269 aaPredicted RBP12.41□□□□□ -0.42
HNRNPC-219ENST00000555309 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
HNRNPC-219ENST00000555309 DDX19BQ9UMR2 479 aa12.41□□□□□ -0.42
HNRNPC-219ENST00000555309 HDAC5Q9UQL6 1122 aa12.41□□□□□ -0.42
HNRNPC-219ENST00000555309 SSC5DA1L4H1 1573 aa12.41□□□□□ -0.42
HNRNPC-219ENST00000555309 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 A0A1B0GUL7 405 aa12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 TCP10L2B9ZVM9 353 aa12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 PRDX5P30044 214 aa12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 MAP2K2P36507 400 aa12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 MAP2K1Q02750 393 aaPredicted RBP12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 RASA3Q14644 834 aa12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 CCDC102BQ68D86 513 aa12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 APOBEC3FQ8IUX4 373 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 AIDAQ96BJ3 306 aa12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 SERPINA10Q9UK55 444 aa12.4□□□□□ -0.42
HNRNPC-219ENST00000555309 MMP14P50281 582 aa12.4□□□□□ -0.43
HNRNPC-219ENST00000555309 ATP8B2P98198 1209 aa12.4□□□□□ -0.43
HNRNPC-219ENST00000555309 POLA2Q14181 598 aa12.4□□□□□ -0.43
HNRNPC-219ENST00000555309 DIXDC1Q155Q3 683 aa12.4□□□□□ -0.43
HNRNPC-219ENST00000555309 SPDYE2Q495Y8 402 aa12.4□□□□□ -0.43
HNRNPC-219ENST00000555309 PI16Q6UXB8 463 aa12.4□□□□□ -0.43
HNRNPC-219ENST00000555309 RASAL3Q86YV0 1011 aa12.4□□□□□ -0.43
HNRNPC-219ENST00000555309 XAGE2Q96GT9 111 aa12.4□□□□□ -0.43
HNRNPC-219ENST00000555309 NEUROD6Q96NK8 337 aa12.4□□□□□ -0.43
HNRNPC-219ENST00000555309 SLC10A3P09131 477 aa12.39□□□□□ -0.43
HNRNPC-219ENST00000555309 CTCFP49711 727 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-219ENST00000555309 RASGRF1Q13972 1273 aa12.39□□□□□ -0.43
HNRNPC-219ENST00000555309 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
HNRNPC-219ENST00000555309 APOBEC3HQ6NTF7 200 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-219ENST00000555309 SSH3Q8TE77 659 aa12.39□□□□□ -0.43
HNRNPC-219ENST00000555309 CLMNQ96JQ2 1002 aa12.39□□□□□ -0.43
HNRNPC-219ENST00000555309 CSRNP1Q96S65 589 aa12.39□□□□□ -0.43
HNRNPC-219ENST00000555309 TMEM39BQ9GZU3 492 aa12.39□□□□□ -0.43
HNRNPC-219ENST00000555309 ANGEL1Q9UNK9 670 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-219ENST00000555309 NOGQ13253 232 aa12.38□□□□□ -0.43
HNRNPC-219ENST00000555309 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
HNRNPC-219ENST00000555309 CHMP4BQ9H444 224 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-219ENST00000555309 ARAP2Q8WZ64 1704 aa12.38□□□□□ -0.43
HNRNPC-219ENST00000555309 PAPPA2Q9BXP8 1791 aa12.38□□□□□ -0.43
HNRNPC-219ENST00000555309 MYO1BO43795 1136 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 FKBP1BP68106 108 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 G3BP1Q13283 466 aaKnown RBP eCLIP12.37□□□□□ -0.434e-10■□□□□ 8.8
HNRNPC-219ENST00000555309 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 TEKT1Q969V4 418 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 TEPSINQ96N21 525 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 ECM29Q5VYK3 1845 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 USP2O75604 605 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 SURF6O75683 361 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 IGHDP01880 384 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 LDLRAD1Q5T700 205 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 CEP85Q6P2H3 762 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 TBC1D9Q6ZT07 1266 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 WDR66Q8TBY9 1149 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 BACH2Q9BYV9 841 aa12.37□□□□□ -0.43
HNRNPC-219ENST00000555309 CAPN15O75808 1086 aa12.36□□□□□ -0.43
HNRNPC-219ENST00000555309 HDAC1Q13547 482 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-219ENST00000555309 ZNF384Q8TF68 577 aa12.36□□□□□ -0.43
HNRNPC-219ENST00000555309 ZDHHC15Q96MV8 337 aa12.36□□□□□ -0.43
HNRNPC-219ENST00000555309 RWDD1Q9H446 243 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-219ENST00000555309 TLR7Q9NYK1 1049 aaKnown RBP12.36□□□□□ -0.43
HNRNPC-219ENST00000555309 DAGLAQ9Y4D2 1042 aa12.36□□□□□ -0.43
HNRNPC-219ENST00000555309 PCDHB15Q9Y5E8 787 aa12.36□□□□□ -0.43
HNRNPC-219ENST00000555309 MYH13Q9UKX3 1938 aa12.36□□□□□ -0.43
HNRNPC-219ENST00000555309 TRPA1O75762 1119 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 PDE4AP27815 886 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 NF2P35240 595 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 HDLBPQ00341 1268 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 NFIAQ12857 509 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 DBNDD2Q9BQY9 259 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 BEGAINQ9BUH8 593 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 PRDM10Q9NQV6 1147 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 SNRKQ9NRH2 765 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 ZBTB40Q9NUA8 1239 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 GNL3LQ9NVN8 582 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 RNF186Q9NXI6 227 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 HMG20BQ9P0W2 317 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 ABCF2Q9UG63 623 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 DENND2AQ9ULE3 1009 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 EXOC6BQ9Y2D4 811 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 AKAP2Q9Y2D5 859 aa12.35□□□□□ -0.43
HNRNPC-219ENST00000555309 LDHBP07195 334 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms