RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CYP8B1Q9UNU6 501 aa8.53□□□□□ -1.04
CKS1BP1-201ENST00000555221 F6X3S4 739 aa8.52□□□□□ -1.05
CKS1BP1-201ENST00000555221 SOX1O00570 391 aaPredicted RBP8.52□□□□□ -1.05
CKS1BP1-201ENST00000555221 GJA8P48165 433 aa8.52□□□□□ -1.05
CKS1BP1-201ENST00000555221 TNNI2P48788 182 aa8.52□□□□□ -1.05
CKS1BP1-201ENST00000555221 C19orf57Q0VDD7 668 aa8.52□□□□□ -1.05
CKS1BP1-201ENST00000555221 LYPD4Q6UWN0 246 aa8.52□□□□□ -1.05
CKS1BP1-201ENST00000555221 MAP4K3Q8IVH8 894 aa8.52□□□□□ -1.05
CKS1BP1-201ENST00000555221 SPATA32Q96LK8 384 aa8.52□□□□□ -1.05
CKS1BP1-201ENST00000555221 LINC01387J3KSC0 135 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 PF4P02776 101 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 ARNTP27540 789 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 CDC25BP30305 580 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 PAK2Q13177 524 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 CAMK2GQ13555 558 aaPredicted RBP8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 SNAP47Q5SQN1 464 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 SCARA3Q6AZY7 606 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 ZNF296Q8WUU4 475 aaPredicted RBP8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 SLC7A3Q8WY07 619 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 GPRASP2Q96D09 838 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 KCNQ5Q9NR82 932 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 ENAMQ9NRM1 1142 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 ADAMTS1Q9UHI8 967 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 TLR6Q9Y2C9 796 aa8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 SUPT16HQ9Y5B9 1047 aaKnown RBP8.51□□□□□ -1.05
CKS1BP1-201ENST00000555221 FSCN2O14926 492 aa8.5□□□□□ -1.05
CKS1BP1-201ENST00000555221 IGSF3O75054 1194 aa8.5□□□□□ -1.05
CKS1BP1-201ENST00000555221 CYP11A1P05108 521 aa8.5□□□□□ -1.05
CKS1BP1-201ENST00000555221 TFE3P19532 575 aaPredicted RBP8.5□□□□□ -1.05
CKS1BP1-201ENST00000555221 BMP6P22004 513 aa8.5□□□□□ -1.05
CKS1BP1-201ENST00000555221 GSTM4Q03013 218 aa8.5□□□□□ -1.05
CKS1BP1-201ENST00000555221 C8orf86Q6ZUL3 223 aa8.5□□□□□ -1.05
CKS1BP1-201ENST00000555221 CCDC84Q86UT8 332 aaPredicted RBP8.5□□□□□ -1.05
CKS1BP1-201ENST00000555221 KLHL23Q8NBE8 558 aa8.5□□□□□ -1.05
CKS1BP1-201ENST00000555221 DCAF11Q8TEB1 546 aa8.5□□□□□ -1.05
CKS1BP1-201ENST00000555221 MIR1-1HGQ9H1L0 117 aa8.5□□□□□ -1.05
CKS1BP1-201ENST00000555221 HNRNPUQ00839 825 aaKnown RBP eCLIP8.49□□□□□ -1.05
CKS1BP1-201ENST00000555221 ARID5AQ03989 594 aa8.49□□□□□ -1.05
CKS1BP1-201ENST00000555221 LLGL2Q6P1M3 1020 aa8.49□□□□□ -1.05
CKS1BP1-201ENST00000555221 TXNDC11Q6PKC3 985 aa8.49□□□□□ -1.05
CKS1BP1-201ENST00000555221 TRIM42Q8IWZ5 723 aa8.49□□□□□ -1.05
CKS1BP1-201ENST00000555221 RASGRP4Q8TDF6 673 aa8.49□□□□□ -1.05
CKS1BP1-201ENST00000555221 TANGO6Q9C0B7 1094 aa8.49□□□□□ -1.05
CKS1BP1-201ENST00000555221 CBX8Q9HC52 389 aa8.49□□□□□ -1.05
CKS1BP1-201ENST00000555221 NID1P14543 1247 aa8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 FAM160A1Q05DH4 1040 aa8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 FBXL19Q6PCT2 694 aa8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 TREML4Q6UXN2 200 aa8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 DTWD1Q8N5C7 304 aa8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 GOLM1Q8NBJ4 401 aa8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 NEDD1Q8NHV4 660 aa8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 ZNF775Q96BV0 537 aaPredicted RBP8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 GMLQ99445 158 aa8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 NT5C1AQ9BXI3 368 aa8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 PRKAG2Q9UGJ0 569 aa8.48□□□□□ -1.05
CKS1BP1-201ENST00000555221 GREM1O60565 184 aa8.47□□□□□ -1.05
CKS1BP1-201ENST00000555221 GSTP1P09211 210 aaKnown RBP8.47□□□□□ -1.05
CKS1BP1-201ENST00000555221 GARTP22102 1010 aa8.47□□□□□ -1.05
CKS1BP1-201ENST00000555221 DNAJA1P31689 397 aaKnown RBP8.47□□□□□ -1.05
CKS1BP1-201ENST00000555221 DGKGP49619 791 aa8.47□□□□□ -1.05
CKS1BP1-201ENST00000555221 SVOPQ8N4V2 548 aa8.47□□□□□ -1.05
CKS1BP1-201ENST00000555221 CORO1BQ9BR76 489 aa8.47□□□□□ -1.05
CKS1BP1-201ENST00000555221 RRAGCQ9HB90 399 aa8.47□□□□□ -1.05
CKS1BP1-201ENST00000555221 ROBO2Q9HCK4 1378 aa8.47□□□□□ -1.05
CKS1BP1-201ENST00000555221 ZNF252P-AS1Q0IIN9 211 aa8.46□□□□□ -1.06
CKS1BP1-201ENST00000555221 COL9A3Q14050 684 aaPredicted RBP8.46□□□□□ -1.06
CKS1BP1-201ENST00000555221 SUZ12Q15022 739 aaKnown RBP8.46□□□□□ -1.06
CKS1BP1-201ENST00000555221 HP1BP3Q5SSJ5 553 aaPredicted RBP8.46□□□□□ -1.06
CKS1BP1-201ENST00000555221 DMRTC2Q8IXT2 367 aaPredicted RBP8.46□□□□□ -1.06
CKS1BP1-201ENST00000555221 STK35Q8TDR2 534 aa8.46□□□□□ -1.06
CKS1BP1-201ENST00000555221 WHAMMQ8TF30 809 aa8.46□□□□□ -1.06
CKS1BP1-201ENST00000555221 UBXN4Q92575 508 aa8.46□□□□□ -1.06
CKS1BP1-201ENST00000555221 SEC16BQ96JE7 1060 aa8.46□□□□□ -1.06
CKS1BP1-201ENST00000555221 CARD10Q9BWT7 1032 aa8.46□□□□□ -1.06
CKS1BP1-201ENST00000555221 PIK3R2O00459 728 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 TRIM37O94972 964 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 ATF4P18848 351 aaPredicted RBP8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 ATP2B1P20020 1258 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 APOBRQ0VD83 1088 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 COL9A2Q14055 689 aaPredicted RBP8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 SETDB1Q15047 1291 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 POU4F3Q15319 338 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 RASIP1Q5U651 963 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 ZNF385CQ66K41 422 aaPredicted RBP8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 HGSNATQ68CP4 663 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 FAM196AQ6ZSG2 479 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 ILDR2Q71H61 639 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 PDZD3Q86UT5 571 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 GRIN3AQ8TCU5 1115 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 EAF1Q96JC9 268 aaPredicted RBP8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 PCDHB5Q9Y5E4 795 aa8.45□□□□□ -1.06
CKS1BP1-201ENST00000555221 SPDYE3A6NKU9 549 aa8.44□□□□□ -1.06
CKS1BP1-201ENST00000555221 TRAPPC3LQ5T215 181 aa8.44□□□□□ -1.06
CKS1BP1-201ENST00000555221 GATAD2BQ8WXI9 593 aa8.44□□□□□ -1.06
CKS1BP1-201ENST00000555221 KCNB2Q92953 911 aa8.44□□□□□ -1.06
CKS1BP1-201ENST00000555221 ARMC5Q96C12 935 aa8.44□□□□□ -1.06
CKS1BP1-201ENST00000555221 KLHDC7BQ96G42 594 aa8.44□□□□□ -1.06
CKS1BP1-201ENST00000555221 LRRC3Q9BY71 257 aa8.44□□□□□ -1.06
CKS1BP1-201ENST00000555221 NRSN2Q9GZP1 204 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms