RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LDHBP07195 334 aaKnown RBP5.42□□□□□ -1.54
SCFD1-213ENST00000554776 FCGRTP55899 365 aa5.42□□□□□ -1.54
SCFD1-213ENST00000554776 FAAP100Q0VG06 881 aa5.42□□□□□ -1.54
SCFD1-213ENST00000554776 EAPPQ56P03 285 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-213ENST00000554776 DTHD1Q6ZMT9 781 aa5.42□□□□□ -1.54
SCFD1-213ENST00000554776 TRIM56Q9BRZ2 755 aaKnown RBP5.42□□□□□ -1.54
SCFD1-213ENST00000554776 RUSC1Q9BVN2 902 aa5.42□□□□□ -1.54
SCFD1-213ENST00000554776 USP26Q9BXU7 913 aa5.42□□□□□ -1.54
SCFD1-213ENST00000554776 TMPRSS13Q9BYE2 586 aa5.42□□□□□ -1.54
SCFD1-213ENST00000554776 OSBPL7Q9BZF2 842 aa5.42□□□□□ -1.54
SCFD1-213ENST00000554776 SRCIN1Q9C0H9 1055 aa5.42□□□□□ -1.54
SCFD1-213ENST00000554776 ZFYVE1Q9HBF4 777 aa5.42□□□□□ -1.54
SCFD1-213ENST00000554776 GIPC1O14908 333 aa5.41□□□□□ -1.54
SCFD1-213ENST00000554776 PRPF40AO75400 957 aaKnown RBP5.41□□□□□ -1.54
SCFD1-213ENST00000554776 DLGAP3O95886 979 aa5.41□□□□□ -1.54
SCFD1-213ENST00000554776 CYP11A1P05108 521 aa5.41□□□□□ -1.54
SCFD1-213ENST00000554776 ITGB7P26010 798 aa5.41□□□□□ -1.54
SCFD1-213ENST00000554776 UVSSAQ2YD98 709 aa5.41□□□□□ -1.54
SCFD1-213ENST00000554776 ANKRD34AQ69YU3 496 aa5.41□□□□□ -1.54
SCFD1-213ENST00000554776 NPM2Q86SE8 214 aaKnown RBP5.41□□□□□ -1.54
SCFD1-213ENST00000554776 C3orf58Q8NDZ4 430 aa5.41□□□□□ -1.54
SCFD1-213ENST00000554776 DDX54Q8TDD1 881 aaKnown RBP5.41□□□□□ -1.54
SCFD1-213ENST00000554776 FAM46AQ96IP4 442 aaKnown RBP5.41□□□□□ -1.54
SCFD1-213ENST00000554776 SEMA6BQ9H3T3 888 aa5.41□□□□□ -1.54
SCFD1-213ENST00000554776 MAOBP27338 520 aa5.4□□□□□ -1.54
SCFD1-213ENST00000554776 GSTT1P30711 240 aa5.4□□□□□ -1.54
SCFD1-213ENST00000554776 AP3B2Q13367 1082 aa5.4□□□□□ -1.54
SCFD1-213ENST00000554776 POU4F3Q15319 338 aa5.4□□□□□ -1.54
SCFD1-213ENST00000554776 EXOSC6Q5RKV6 272 aaKnown RBP5.4□□□□□ -1.54
SCFD1-213ENST00000554776 PRR23CQ6ZRP0 262 aa5.4□□□□□ -1.54
SCFD1-213ENST00000554776 ARMC10Q8N2F6 343 aa5.4□□□□□ -1.54
SCFD1-213ENST00000554776 SMG8Q8ND04 991 aaKnown RBP5.4□□□□□ -1.54
SCFD1-213ENST00000554776 FRMD6Q96NE9 622 aa5.4□□□□□ -1.54
SCFD1-213ENST00000554776 SUGCTQ9HAC7 445 aa5.4□□□□□ -1.54
SCFD1-213ENST00000554776 RNF19AQ9NV58 838 aa5.4□□□□□ -1.54
SCFD1-213ENST00000554776 SPG7Q9UQ90 795 aa5.4□□□□□ -1.54
SCFD1-213ENST00000554776 TIAF1O95411 115 aa5.39□□□□□ -1.55
SCFD1-213ENST00000554776 CTSBP07858 339 aa5.39□□□□□ -1.55
SCFD1-213ENST00000554776 PREPP48147 710 aa5.39□□□□□ -1.55
SCFD1-213ENST00000554776 FGD1P98174 961 aa5.39□□□□□ -1.55
SCFD1-213ENST00000554776 TAGLNQ01995 201 aaKnown RBP5.39□□□□□ -1.55
SCFD1-213ENST00000554776 NUTM2GQ5VZR2 741 aa5.39□□□□□ -1.55
SCFD1-213ENST00000554776 FDX2Q6P4F2 183 aa5.39□□□□□ -1.55
SCFD1-213ENST00000554776 C12orf49Q9H741 205 aa5.39□□□□□ -1.55
SCFD1-213ENST00000554776 ECEL1O95672 775 aa5.38□□□□□ -1.55
SCFD1-213ENST00000554776 GNA15P30679 374 aa5.38□□□□□ -1.55
SCFD1-213ENST00000554776 ZNF157P51786 506 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-213ENST00000554776 HP1BP3Q5SSJ5 553 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-213ENST00000554776 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-213ENST00000554776 RGS22Q8NE09 1264 aa5.38□□□□□ -1.55
SCFD1-213ENST00000554776 ANKRD24Q8TF21 1146 aa5.38□□□□□ -1.55
SCFD1-213ENST00000554776 UTP4Q969X6 686 aaKnown RBP5.38□□□□□ -1.55
SCFD1-213ENST00000554776 MYRFLQ96LU7 910 aa5.38□□□□□ -1.55
SCFD1-213ENST00000554776 DUSP9Q99956 384 aaKnown RBP5.38□□□□□ -1.55
SCFD1-213ENST00000554776 CORO1BQ9BR76 489 aa5.38□□□□□ -1.55
SCFD1-213ENST00000554776 CYP4F12Q9HCS2 524 aa5.38□□□□□ -1.55
SCFD1-213ENST00000554776 TMEM39AQ9NV64 488 aa5.38□□□□□ -1.55
SCFD1-213ENST00000554776 FAM8A1Q9UBU6 413 aa5.38□□□□□ -1.55
SCFD1-213ENST00000554776 GPN3Q9UHW5 284 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-213ENST00000554776 PPM1HQ9ULR3 514 aa5.38□□□□□ -1.55
SCFD1-213ENST00000554776 AKAP2Q9Y2D5 859 aa5.38□□□□□ -1.55
SCFD1-213ENST00000554776 DHX15O43143 795 aaKnown RBP5.37□□□□□ -1.55
SCFD1-213ENST00000554776 SART1O43290 800 aaKnown RBP5.37□□□□□ -1.55
SCFD1-213ENST00000554776 PPP2R3AQ06190 1150 aa5.37□□□□□ -1.55
SCFD1-213ENST00000554776 PRSS36Q5K4E3 855 aa5.37□□□□□ -1.55
SCFD1-213ENST00000554776 ZNF428Q96B54 188 aa5.37□□□□□ -1.55
SCFD1-213ENST00000554776 BCL2L13Q9BXK5 485 aa5.37□□□□□ -1.55
SCFD1-213ENST00000554776 HIF3AQ9Y2N7 669 aa5.37□□□□□ -1.55
SCFD1-213ENST00000554776 RAXQ9Y2V3 346 aa5.37□□□□□ -1.55
SCFD1-213ENST00000554776 USP17L7P0C7H9 530 aa5.36□□□□□ -1.55
SCFD1-213ENST00000554776 SOX4Q06945 474 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-213ENST00000554776 PDZD3Q86UT5 571 aa5.36□□□□□ -1.55
SCFD1-213ENST00000554776 FAM20CQ8IXL6 584 aa5.36□□□□□ -1.55
SCFD1-213ENST00000554776 C12orf50Q8NA57 414 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-213ENST00000554776 NECAB3Q96P71 396 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-213ENST00000554776 PARP2Q9UGN5 583 aa5.36□□□□□ -1.55
SCFD1-213ENST00000554776 AK5Q9Y6K8 562 aa5.36□□□□□ -1.55
SCFD1-213ENST00000554776 SYNGAP1Q96PV0 1343 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 GAS2O43903 313 aaKnown RBP5.35□□□□□ -1.55
SCFD1-213ENST00000554776 GSTP1P09211 210 aaKnown RBP5.35□□□□□ -1.55
SCFD1-213ENST00000554776 ADH5P11766 374 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 BMP3P12645 472 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 DRD2P14416 443 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 EIF4BP23588 611 aaKnown RBP5.35□□□□□ -1.55
SCFD1-213ENST00000554776 DAB2P98082 770 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 TPTE2Q6XPS3 522 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 SULF2Q8IWU5 870 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 C2CD4AQ8NCU7 369 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-213ENST00000554776 GIPC2Q8TF65 315 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 WDR18Q9BV38 432 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 CEP44Q9C0F1 390 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 CCDC86Q9H6F5 360 aaKnown RBP5.35□□□□□ -1.55
SCFD1-213ENST00000554776 KRT82Q9NSB4 513 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 STOML1Q9UBI4 398 aa5.35□□□□□ -1.55
SCFD1-213ENST00000554776 ENC1O14682 589 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 AOC2O75106 756 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 ZNF16P17020 682 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-213ENST00000554776 FSTP19883 344 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 NME2P22392 152 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 PDE3AQ14432 1141 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms