RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 CCDC57Q2TAC2 916 aa27.41■■□□□ 1.98
NPAS3-211ENST00000551634 RALYLQ86SE5 291 aaKnown RBP27.41■■□□□ 1.98
NPAS3-211ENST00000551634 TIGD1Q96MW7 591 aa27.41■■□□□ 1.98
NPAS3-211ENST00000551634 XPO4Q9C0E2 1151 aaKnown RBP27.41■■□□□ 1.98
NPAS3-211ENST00000551634 AXDND1Q5T1B0 1012 aaPredicted RBP27.41■■□□□ 1.98
NPAS3-211ENST00000551634 XAGE2Q96GT9 111 aa27.41■■□□□ 1.98
NPAS3-211ENST00000551634 IKBKBO14920 756 aa27.4■■□□□ 1.98
NPAS3-211ENST00000551634 HAND2P61296 217 aa27.4■■□□□ 1.98
NPAS3-211ENST00000551634 KIF23Q02241 960 aaPredicted RBP27.4■■□□□ 1.98
NPAS3-211ENST00000551634 ERVV-2B6SEH9 535 aa27.4■■□□□ 1.98
NPAS3-211ENST00000551634 SLU7O95391 586 aaKnown RBP27.4■■□□□ 1.98
NPAS3-211ENST00000551634 ZBTB3Q9H5J0 574 aa27.4■■□□□ 1.98
NPAS3-211ENST00000551634 IFNKQ9P0W0 207 aa27.4■■□□□ 1.98
NPAS3-211ENST00000551634 ANTXR2P58335 489 aa27.4■■□□□ 1.98
NPAS3-211ENST00000551634 FBXW7Q969H0 707 aa27.4■■□□□ 1.98
NPAS3-211ENST00000551634 SMC2O95347 1197 aa27.39■■□□□ 1.98
NPAS3-211ENST00000551634 A1BGP04217 495 aa27.39■■□□□ 1.98
NPAS3-211ENST00000551634 CHRNA2Q15822 529 aa27.39■■□□□ 1.98
NPAS3-211ENST00000551634 ISCA1Q9BUE6 129 aa27.39■■□□□ 1.98
NPAS3-211ENST00000551634 ZNF213O14771 459 aa27.39■■□□□ 1.97
NPAS3-211ENST00000551634 SFPQP23246 707 aaKnown RBP eCLIP27.39■■□□□ 1.97
NPAS3-211ENST00000551634 GABPB1Q06547 395 aaPredicted RBP27.39■■□□□ 1.97
NPAS3-211ENST00000551634 NCAPHQ15003 741 aa27.39■■□□□ 1.97
NPAS3-211ENST00000551634 CPDO75976 1380 aa27.38■■□□□ 1.97
NPAS3-211ENST00000551634 SLC39A14Q15043 492 aa27.38■■□□□ 1.97
NPAS3-211ENST00000551634 E4F1Q66K89 784 aaPredicted RBP27.38■■□□□ 1.97
NPAS3-211ENST00000551634 PFKFB1P16118 471 aa27.38■■□□□ 1.97
NPAS3-211ENST00000551634 TMC6Q7Z403 805 aa27.38■■□□□ 1.97
NPAS3-211ENST00000551634 ZHX1Q9UKY1 873 aaPredicted RBP27.38■■□□□ 1.97
NPAS3-211ENST00000551634 PCDH11XQ9BZA7 1347 aa27.37■■□□□ 1.97
NPAS3-211ENST00000551634 PCDH11YQ9BZA8 1340 aa27.37■■□□□ 1.97
NPAS3-211ENST00000551634 ZNF335Q9H4Z2 1342 aaPredicted RBP27.37■■□□□ 1.97
NPAS3-211ENST00000551634 ARMCX5Q6P1M9 558 aa27.37■■□□□ 1.97
NPAS3-211ENST00000551634 L2HGDHQ9H9P8 463 aa27.37■■□□□ 1.97
NPAS3-211ENST00000551634 KCPQ6ZWJ8 1503 aa27.37■■□□□ 1.97
NPAS3-211ENST00000551634 KIF28PB7ZC32 967 aa27.36■■□□□ 1.97
NPAS3-211ENST00000551634 ADORA1P30542 326 aa27.36■■□□□ 1.97
NPAS3-211ENST00000551634 TNS3Q68CZ2 1445 aa27.36■■□□□ 1.97
NPAS3-211ENST00000551634 ATF3P18847 181 aa27.36■■□□□ 1.97
NPAS3-211ENST00000551634 PUS7LQ9H0K6 701 aaKnown RBP27.36■■□□□ 1.97
NPAS3-211ENST00000551634 TRIM28Q13263 835 aaKnown RBP27.35■■□□□ 1.97
NPAS3-211ENST00000551634 CABLES1Q8TDN4 633 aa27.35■■□□□ 1.97
NPAS3-211ENST00000551634 PPP1R13BQ96KQ4 1090 aa27.35■■□□□ 1.97
NPAS3-211ENST00000551634 TUBE1Q9UJT0 475 aa27.35■■□□□ 1.97
NPAS3-211ENST00000551634 C4AP0C0L4 1744 aa27.35■■□□□ 1.97
NPAS3-211ENST00000551634 C4BP0C0L5 1744 aa27.35■■□□□ 1.97
NPAS3-211ENST00000551634 PPP6R2O75170 966 aa27.35■■□□□ 1.97
NPAS3-211ENST00000551634 JMYQ8N9B5 988 aa27.35■■□□□ 1.97
NPAS3-211ENST00000551634 GPAA1O43292 621 aa27.34■■□□□ 1.97
NPAS3-211ENST00000551634 ZAP70P43403 619 aa27.34■■□□□ 1.97
NPAS3-211ENST00000551634 KMT5BQ4FZB7 885 aa27.34■■□□□ 1.97
NPAS3-211ENST00000551634 PLA2G12BQ9BX93 195 aa27.34■■□□□ 1.97
NPAS3-211ENST00000551634 ZMYM6O95789 1325 aa27.34■■□□□ 1.97
NPAS3-211ENST00000551634 MYH7P12883 1935 aa27.34■■□□□ 1.97
NPAS3-211ENST00000551634 CCP110O43303 1012 aa27.34■■□□□ 1.97
NPAS3-211ENST00000551634 CDKL5O76039 1030 aa27.34■■□□□ 1.97
NPAS3-211ENST00000551634 TRDNQ13061 729 aa27.34■■□□□ 1.97
NPAS3-211ENST00000551634 TCIRG1Q13488 830 aa27.34■■□□□ 1.97
NPAS3-211ENST00000551634 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.34■■□□□ 1.97
NPAS3-211ENST00000551634 PAPPAQ13219 1627 aa27.34■■□□□ 1.97
NPAS3-211ENST00000551634 ZCRB1Q8TBF4 217 aaKnown RBP27.33■■□□□ 1.97
NPAS3-211ENST00000551634 FAM237AA0A1B0GTK4 181 aa27.33■■□□□ 1.97
NPAS3-211ENST00000551634 BIN1O00499 593 aa27.33■■□□□ 1.97
NPAS3-211ENST00000551634 FANCCQ00597 558 aa27.33■■□□□ 1.97
NPAS3-211ENST00000551634 SCARF1Q14162 830 aa27.33■■□□□ 1.97
NPAS3-211ENST00000551634 ANGEL1Q9UNK9 670 aaKnown RBP27.33■■□□□ 1.97
NPAS3-211ENST00000551634 HPSEQ9Y251 543 aa27.33■■□□□ 1.97
NPAS3-211ENST00000551634 DCCP43146 1447 aa27.33■■□□□ 1.97
NPAS3-211ENST00000551634 SYKP43405 635 aa27.32■■□□□ 1.96
NPAS3-211ENST00000551634 MYO1BO43795 1136 aa27.32■■□□□ 1.96
NPAS3-211ENST00000551634 WDHD1O75717 1129 aaPredicted RBP27.32■■□□□ 1.96
NPAS3-211ENST00000551634 NKX1-1Q15270 411 aaPredicted RBP27.32■■□□□ 1.96
NPAS3-211ENST00000551634 GJB4Q9NTQ9 266 aa27.32■■□□□ 1.96
NPAS3-211ENST00000551634 CBFA2T2O43439 604 aa27.31■■□□□ 1.96
NPAS3-211ENST00000551634 PCCAP05165 728 aaPredicted RBP27.31■■□□□ 1.96
NPAS3-211ENST00000551634 CSF1RP07333 972 aa27.31■■□□□ 1.96
NPAS3-211ENST00000551634 CPLX2Q6PUV4 134 aaKnown RBP27.31■■□□□ 1.96
NPAS3-211ENST00000551634 KRT222Q8N1A0 295 aa27.31■■□□□ 1.96
NPAS3-211ENST00000551634 DDX17Q92841 729 aaKnown RBP27.31■■□□□ 1.96
NPAS3-211ENST00000551634 FAM53CQ9NYF3 392 aa27.31■■□□□ 1.96
NPAS3-211ENST00000551634 MROH7-TTC4A0A0A0MT08 1334 aa27.31■■□□□ 1.96
NPAS3-211ENST00000551634 ELF2Q15723 593 aa27.3■■□□□ 1.96
NPAS3-211ENST00000551634 CCDC93Q567U6 631 aa27.3■■□□□ 1.96
NPAS3-211ENST00000551634 ALG1Q9BT22 464 aa27.3■■□□□ 1.96
NPAS3-211ENST00000551634 TAF7LQ5H9L4 462 aa27.3■■□□□ 1.96
NPAS3-211ENST00000551634 ZNF512BQ96KM6 892 aaPredicted RBP27.3■■□□□ 1.96
NPAS3-211ENST00000551634 TNS2Q63HR2 1409 aa27.3■■□□□ 1.96
NPAS3-211ENST00000551634 IFIT5Q13325 482 aaKnown RBP27.29■■□□□ 1.96
NPAS3-211ENST00000551634 FBXO38Q6PIJ6 1188 aa27.29■■□□□ 1.96
NPAS3-211ENST00000551634 VPS37DQ86XT2 251 aa27.29■■□□□ 1.96
NPAS3-211ENST00000551634 ATRNO75882 1429 aa27.29■■□□□ 1.96
NPAS3-211ENST00000551634 METAP2P50579 478 aaKnown RBP eCLIP27.29■■□□□ 1.96
NPAS3-211ENST00000551634 LMOD1P29536 600 aaPredicted RBP27.28■■□□□ 1.96
NPAS3-211ENST00000551634 ADD2P35612 726 aa27.28■■□□□ 1.96
NPAS3-211ENST00000551634 MYL5Q02045 173 aa27.28■■□□□ 1.96
NPAS3-211ENST00000551634 PTPAQ15257 358 aa27.28■■□□□ 1.96
NPAS3-211ENST00000551634 RAB11FIP4Q86YS3 637 aa27.28■■□□□ 1.96
NPAS3-211ENST00000551634 HSD3B7Q9H2F3 369 aa27.28■■□□□ 1.96
NPAS3-211ENST00000551634 MARCKSP29966 332 aaPredicted RBP27.28■■□□□ 1.96
NPAS3-211ENST00000551634 KRT40Q6A162 431 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms