RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 GLYCTKQ8IVS8 523 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 GJD3Q8N144 294 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 PBX4Q9BYU1 374 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 LACRTQ9GZZ8 138 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 MROH1Q8NDA8 1641 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 LRRC9Q6ZRR7 1453 aa7.88□□□□□ -1.15
SCAF11-214ENST00000550893 C9orf84Q5VXU9 1444 aa7.88□□□□□ -1.15
SCAF11-214ENST00000550893 K7ELQ4 463 aaPredicted RBP7.88□□□□□ -1.15
SCAF11-214ENST00000550893 EHHADHQ08426 723 aa7.88□□□□□ -1.15
SCAF11-214ENST00000550893 CACTIN-AS1Q8N1I8 211 aa7.88□□□□□ -1.15
SCAF11-214ENST00000550893 PMEPA1Q969W9 287 aa7.88□□□□□ -1.15
SCAF11-214ENST00000550893 FOXD3Q9UJU5 478 aaPredicted RBP7.88□□□□□ -1.15
SCAF11-214ENST00000550893 USP21Q9UK80 565 aa7.88□□□□□ -1.15
SCAF11-214ENST00000550893 MROH2AA6NES4 1674 aa7.88□□□□□ -1.15
SCAF11-214ENST00000550893 ARHGEF5Q12774 1597 aa7.88□□□□□ -1.15
SCAF11-214ENST00000550893 ATP10AO60312 1499 aa7.87□□□□□ -1.15
SCAF11-214ENST00000550893 DLL1O00548 723 aa7.87□□□□□ -1.15
SCAF11-214ENST00000550893 EREGO14944 169 aa7.87□□□□□ -1.15
SCAF11-214ENST00000550893 PHACTR2O75167 634 aa7.87□□□□□ -1.15
SCAF11-214ENST00000550893 ARHGAP4P98171 946 aa7.87□□□□□ -1.15
SCAF11-214ENST00000550893 NRG1Q02297 640 aaPredicted RBP7.87□□□□□ -1.15
SCAF11-214ENST00000550893 SETDB1Q15047 1291 aa7.87□□□□□ -1.15
SCAF11-214ENST00000550893 POP1Q99575 1024 aaKnown RBP7.87□□□□□ -1.15
SCAF11-214ENST00000550893 PPME1Q9Y570 386 aa7.87□□□□□ -1.15
SCAF11-214ENST00000550893 CAMSAP2Q08AD1 1489 aa7.87□□□□□ -1.15
SCAF11-214ENST00000550893 STRCQ7RTU9 1775 aa7.87□□□□□ -1.15
SCAF11-214ENST00000550893 PREX1Q8TCU6 1659 aa7.86□□□□□ -1.15
SCAF11-214ENST00000550893 MAST1Q9Y2H9 1570 aa7.86□□□□□ -1.15
SCAF11-214ENST00000550893 LINC01387J3KSC0 135 aa7.86□□□□□ -1.15
SCAF11-214ENST00000550893 NFKBIEO00221 500 aa7.86□□□□□ -1.15
SCAF11-214ENST00000550893 TRPA1O75762 1119 aa7.86□□□□□ -1.15
SCAF11-214ENST00000550893 CDC27P30260 824 aa7.86□□□□□ -1.15
SCAF11-214ENST00000550893 IGF2-ASQ6U949 168 aa7.86□□□□□ -1.15
SCAF11-214ENST00000550893 SNX29Q8TEQ0 813 aa7.86□□□□□ -1.15
SCAF11-214ENST00000550893 TPSG1Q9NRR2 321 aa7.86□□□□□ -1.15
SCAF11-214ENST00000550893 DZANK1Q9NVP4 752 aa7.86□□□□□ -1.15
SCAF11-214ENST00000550893 KIAA1107Q9UPP5 1409 aa7.86□□□□□ -1.15
SCAF11-214ENST00000550893 CDC25BP30305 580 aa7.85□□□□□ -1.15
SCAF11-214ENST00000550893 TXNDC11Q6PKC3 985 aa7.85□□□□□ -1.15
SCAF11-214ENST00000550893 TXNRD3Q86VQ6 643 aa7.85□□□□□ -1.15
SCAF11-214ENST00000550893 CCER1Q8TC90 406 aaPredicted RBP7.85□□□□□ -1.15
SCAF11-214ENST00000550893 MUC3BQ9H195 1237 aa7.85□□□□□ -1.15
SCAF11-214ENST00000550893 SRA1Q9HD15 236 aaKnown RBP7.85□□□□□ -1.15
SCAF11-214ENST00000550893 BRPF3Q9ULD4 1205 aa7.85□□□□□ -1.15
SCAF11-214ENST00000550893 ZNF142P52746 1687 aaPredicted RBP7.85□□□□□ -1.15
SCAF11-214ENST00000550893 CLTCQ00610 1675 aaKnown RBP7.85□□□□□ -1.15
SCAF11-214ENST00000550893 RNF17Q9BXT8 1623 aaKnown RBP7.85□□□□□ -1.15
SCAF11-214ENST00000550893 MAP4K3Q8IVH8 894 aa7.84□□□□□ -1.15
SCAF11-214ENST00000550893 AFAP1Q8N556 730 aa7.84□□□□□ -1.15
SCAF11-214ENST00000550893 HHIPQ96QV1 700 aa7.84□□□□□ -1.15
SCAF11-214ENST00000550893 SH2B1Q9NRF2 756 aaPredicted RBP7.84□□□□□ -1.15
SCAF11-214ENST00000550893 ZNF644Q9H582 1327 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-214ENST00000550893 PDE2AO00408 941 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-214ENST00000550893 PTPRAP18433 802 aa7.83□□□□□ -1.16
SCAF11-214ENST00000550893 EPHA1P21709 976 aa7.83□□□□□ -1.16
SCAF11-214ENST00000550893 RSPO4Q2I0M5 234 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-214ENST00000550893 GALNT11Q8NCW6 608 aa7.83□□□□□ -1.16
SCAF11-214ENST00000550893 WFDC12Q8WWY7 111 aa7.83□□□□□ -1.16
SCAF11-214ENST00000550893 OSMRQ99650 979 aa7.83□□□□□ -1.16
SCAF11-214ENST00000550893 ADAM19Q9H013 955 aa7.83□□□□□ -1.16
SCAF11-214ENST00000550893 ZFYVE28Q9HCC9 887 aa7.83□□□□□ -1.16
SCAF11-214ENST00000550893 DNMT1P26358 1616 aaKnown RBP7.82□□□□□ -1.16
SCAF11-214ENST00000550893 MYO3AQ8NEV4 1616 aa7.82□□□□□ -1.16
SCAF11-214ENST00000550893 NDUFB5O43674 189 aa7.82□□□□□ -1.16
SCAF11-214ENST00000550893 BRD1O95696 1058 aa7.82□□□□□ -1.16
SCAF11-214ENST00000550893 IREB2P48200 963 aaKnown RBP7.82□□□□□ -1.16
SCAF11-214ENST00000550893 NKAPLQ5M9Q1 402 aa7.82□□□□□ -1.16
SCAF11-214ENST00000550893 ZKSCAN3Q9BRR0 538 aa7.82□□□□□ -1.16
SCAF11-214ENST00000550893 KRTAP4-8Q9BYQ9 185 aa7.82□□□□□ -1.16
SCAF11-214ENST00000550893 LATS2Q9NRM7 1088 aa7.82□□□□□ -1.16
SCAF11-214ENST00000550893 AMOTL2Q9Y2J4 779 aa7.82□□□□□ -1.16
SCAF11-214ENST00000550893 DEPDC5O75140 1603 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 POLR3DP05423 398 aaPredicted RBP7.81□□□□□ -1.16
SCAF11-214ENST00000550893 EDN3P14138 238 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 NOS3P29474 1203 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 EFCAB2Q5VUJ9 269 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 PEAR1Q5VY43 1037 aaPredicted RBP7.81□□□□□ -1.16
SCAF11-214ENST00000550893 Q8N3U1 123 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 TMEM102Q8N9M5 508 aaPredicted RBP7.81□□□□□ -1.16
SCAF11-214ENST00000550893 CARD10Q9BWT7 1032 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 SEMA6BQ9H3T3 888 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 MTUS2Q5JR59 1369 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 PTPN23Q9H3S7 1636 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 TCOF1Q13428 1488 aaKnown RBP7.81□□□□□ -1.16
SCAF11-214ENST00000550893 CCDC141Q6ZP82 1450 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 PLEKHH2Q8IVE3 1493 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 CEP152O94986 1710 aa7.81□□□□□ -1.16
SCAF11-214ENST00000550893 SOWAHDA6NJG2 315 aa7.8□□□□□ -1.16
SCAF11-214ENST00000550893 TM4SF5O14894 197 aa7.8□□□□□ -1.16
SCAF11-214ENST00000550893 FSCN2O14926 492 aa7.8□□□□□ -1.16
SCAF11-214ENST00000550893 DCAF11Q8TEB1 546 aa7.8□□□□□ -1.16
SCAF11-214ENST00000550893 NXPE3Q969Y0 559 aa7.8□□□□□ -1.16
SCAF11-214ENST00000550893 PSMG3-AS1Q96PY0 264 aa7.8□□□□□ -1.16
SCAF11-214ENST00000550893 FAM129BQ96TA1 746 aa7.8□□□□□ -1.16
SCAF11-214ENST00000550893 SSBP4Q9BWG4 385 aaPredicted RBP7.8□□□□□ -1.16
SCAF11-214ENST00000550893 MRPL18Q9H0U6 180 aaKnown RBP7.8□□□□□ -1.16
SCAF11-214ENST00000550893 KCNK4Q9NYG8 393 aa7.8□□□□□ -1.16
SCAF11-214ENST00000550893 GNEQ9Y223 722 aaKnown RBP7.8□□□□□ -1.16
SCAF11-214ENST00000550893 EIF2AK4Q9P2K8 1649 aaKnown RBP7.8□□□□□ -1.16
SCAF11-214ENST00000550893 MYOM3Q5VTT5 1437 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms