RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 FPGT-TNNI3KV9GXZ4 949 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 SCN7AQ01118 1682 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 ZNF609O15014 1411 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 BCORQ6W2J9 1755 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 CYP21A2P08686 494 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 FGD1P98174 961 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 MCMDC2Q4G0Z9 681 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 HSP90AB3PQ58FF7 597 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 LRRC8AQ8IWT6 810 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 RCOR1Q9UKL0 485 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 UBN2Q6ZU65 1347 aa13.41□□□□□ -0.26
DDB1-224ENST00000545894 PFKFB2O60825 505 aa13.41□□□□□ -0.26
DDB1-224ENST00000545894 HMGB1P09429 215 aaKnown RBP13.41□□□□□ -0.26
DDB1-224ENST00000545894 TM4SF1P30408 202 aa13.41□□□□□ -0.26
DDB1-224ENST00000545894 ADD1P35611 737 aaKnown RBP13.41□□□□□ -0.26
DDB1-224ENST00000545894 CEBPZQ03701 1054 aaKnown RBP13.41□□□□□ -0.26
DDB1-224ENST00000545894 CCDC129Q6ZRS4 1044 aa13.41□□□□□ -0.26
DDB1-224ENST00000545894 C11orf57Q6ZUT1 292 aaPredicted RBP13.41□□□□□ -0.26
DDB1-224ENST00000545894 CCAR1Q8IX12 1150 aaKnown RBP13.41□□□□□ -0.26
DDB1-224ENST00000545894 NIP7Q9Y221 180 aaKnown RBP eCLIP13.41□□□□□ -0.26
DDB1-224ENST00000545894 ARFGEF2Q9Y6D5 1785 aa13.41□□□□□ -0.26
DDB1-224ENST00000545894 TFCP2Q12800 502 aa13.41□□□□□ -0.26
DDB1-224ENST00000545894 NFIXQ14938 502 aa13.41□□□□□ -0.26
DDB1-224ENST00000545894 CEP135Q66GS9 1140 aa13.41□□□□□ -0.26
DDB1-224ENST00000545894 CCDC73Q6ZRK6 1079 aa13.41□□□□□ -0.26
DDB1-224ENST00000545894 NLGN1Q8N2Q7 840 aa13.41□□□□□ -0.26
DDB1-224ENST00000545894 ZBTB7AO95365 584 aa13.4□□□□□ -0.26
DDB1-224ENST00000545894 RFX5P48382 616 aaPredicted RBP13.4□□□□□ -0.26
DDB1-224ENST00000545894 TRIM28Q13263 835 aaKnown RBP13.4□□□□□ -0.26
DDB1-224ENST00000545894 ATL3Q6DD88 541 aa13.4□□□□□ -0.26
DDB1-224ENST00000545894 NLRP10Q86W26 655 aa13.4□□□□□ -0.26
DDB1-224ENST00000545894 NSUN7Q8NE18 718 aaKnown RBP13.4□□□□□ -0.26
DDB1-224ENST00000545894 SLC16A10Q8TF71 515 aa13.4□□□□□ -0.26
DDB1-224ENST00000545894 SEC62Q99442 399 aaKnown RBP13.4□□□□□ -0.26
DDB1-224ENST00000545894 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.26
DDB1-224ENST00000545894 HAUS7Q99871 368 aa13.4□□□□□ -0.26
DDB1-224ENST00000545894 OGFRQ9NZT2 677 aa13.4□□□□□ -0.26
DDB1-224ENST00000545894 CGNQ9P2M7 1197 aaKnown RBP13.4□□□□□ -0.26
DDB1-224ENST00000545894 BECN2A8MW95 431 aa13.39□□□□□ -0.27
DDB1-224ENST00000545894 PTPN12Q05209 780 aaKnown RBP13.39□□□□□ -0.27
DDB1-224ENST00000545894 SUSD4Q5VX71 490 aa13.39□□□□□ -0.27
DDB1-224ENST00000545894 ZNF396Q96N95 335 aaPredicted RBP13.39□□□□□ -0.27
DDB1-224ENST00000545894 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
DDB1-224ENST00000545894 LRRC2Q9BYS8 371 aa13.39□□□□□ -0.27
DDB1-224ENST00000545894 NDUFB9Q9Y6M9 179 aa13.39□□□□□ -0.27
DDB1-224ENST00000545894 CASZ1Q86V15 1759 aa13.39□□□□□ -0.27
DDB1-224ENST00000545894 KINO60870 393 aaKnown RBP13.39□□□□□ -0.27
DDB1-224ENST00000545894 STOX1Q6ZVD7 989 aa13.39□□□□□ -0.27
DDB1-224ENST00000545894 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
DDB1-224ENST00000545894 GOLPH3LQ9H4A5 285 aa13.39□□□□□ -0.27
DDB1-224ENST00000545894 ANO10Q9NW15 660 aa13.39□□□□□ -0.27
DDB1-224ENST00000545894 CTNNA3Q9UI47 895 aa13.39□□□□□ -0.27
DDB1-224ENST00000545894 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
DDB1-224ENST00000545894 PTPDC1A2A3K4 754 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 CHGBP05060 677 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 DDR1Q08345 913 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 SNW1Q13573 536 aaKnown RBP13.38□□□□□ -0.27
DDB1-224ENST00000545894 CCDC191Q8NCU4 936 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 DBNDD2Q9BQY9 259 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 NUP98P52948 1817 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 KIF20AO95235 890 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 CTDNEP1O95476 244 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 SKILP12757 684 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 FAM160A1Q05DH4 1040 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 RABL6Q3YEC7 729 aaPredicted RBP13.38□□□□□ -0.27
DDB1-224ENST00000545894 PARP10Q53GL7 1025 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 KBTBD3Q8NAB2 608 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 USP28Q96RU2 1077 aa13.38□□□□□ -0.27
DDB1-224ENST00000545894 FTOQ9C0B1 505 aaKnown RBP eCLIP13.38□□□□□ -0.27
DDB1-224ENST00000545894 CWC25Q9NXE8 425 aaPredicted RBP13.38□□□□□ -0.27
DDB1-224ENST00000545894 ATF5Q9Y2D1 282 aaPredicted RBP13.38□□□□□ -0.27
DDB1-224ENST00000545894 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
DDB1-224ENST00000545894 MMP10P09238 476 aa13.37□□□□□ -0.27
DDB1-224ENST00000545894 FOSBP53539 338 aa13.37□□□□□ -0.27
DDB1-224ENST00000545894 ARID5BQ14865 1188 aa13.37□□□□□ -0.27
DDB1-224ENST00000545894 PTPN14Q15678 1187 aa13.37□□□□□ -0.27
DDB1-224ENST00000545894 NYAP1Q6ZVC0 841 aa13.37□□□□□ -0.27
DDB1-224ENST00000545894 DDX46Q7L014 1031 aaKnown RBP13.37□□□□□ -0.27
DDB1-224ENST00000545894 DHX40Q8IX18 779 aaKnown RBP13.37□□□□□ -0.27
DDB1-224ENST00000545894 CEP57L1Q8IYX8 460 aa13.37□□□□□ -0.27
DDB1-224ENST00000545894 ENGASEQ8NFI3 743 aa13.37□□□□□ -0.27
DDB1-224ENST00000545894 MTFR1LQ9H019 292 aa13.37□□□□□ -0.27
DDB1-224ENST00000545894 CCDC69A6NI79 296 aa13.37□□□□□ -0.27
DDB1-224ENST00000545894 APOBRQ0VD83 1088 aa13.37□□□□□ -0.27
DDB1-224ENST00000545894 AGXT2Q9BYV1 514 aa13.37□□□□□ -0.27
DDB1-224ENST00000545894 USP27XA6NNY8 438 aa13.36□□□□□ -0.27
DDB1-224ENST00000545894 NTSR2O95665 410 aa13.36□□□□□ -0.27
DDB1-224ENST00000545894 NAA30Q147X3 362 aaPredicted RBP13.36□□□□□ -0.27
DDB1-224ENST00000545894 SYNE4Q8N205 404 aa13.36□□□□□ -0.27
DDB1-224ENST00000545894 DSCC1Q9BVC3 393 aa13.36□□□□□ -0.27
DDB1-224ENST00000545894 UTP14AQ9BVJ6 771 aaKnown RBP13.36□□□□□ -0.27
DDB1-224ENST00000545894 NAT10Q9H0A0 1025 aaKnown RBP13.36□□□□□ -0.27
DDB1-224ENST00000545894 CARMIL3Q8ND23 1372 aa13.36□□□□□ -0.27
DDB1-224ENST00000545894 SERPINB2P05120 415 aa13.36□□□□□ -0.27
DDB1-224ENST00000545894 ME1P48163 572 aa13.36□□□□□ -0.27
DDB1-224ENST00000545894 CCZ1BP86790 482 aa13.36□□□□□ -0.27
DDB1-224ENST00000545894 CCZ1P86791 482 aaPredicted RBP13.36□□□□□ -0.27
DDB1-224ENST00000545894 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
DDB1-224ENST00000545894 UBE3BQ7Z3V4 1068 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms