RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 C7orf61Q8IZ16 206 aa19.99■□□□□ 0.79
CLSTN3-216ENST00000545663 TMEM39BQ9GZU3 492 aa19.99■□□□□ 0.79
CLSTN3-216ENST00000545663 ZNF70Q9UC06 446 aaPredicted RBP19.99■□□□□ 0.79
CLSTN3-216ENST00000545663 CSADQ9Y600 493 aa19.99■□□□□ 0.79
CLSTN3-216ENST00000545663 MUC3AQ02505 3323 aa19.98■□□□□ 0.79
CLSTN3-216ENST00000545663 ECM29Q5VYK3 1845 aa19.98■□□□□ 0.79
CLSTN3-216ENST00000545663 SPDYE5A6NIY4 337 aa19.98■□□□□ 0.79
CLSTN3-216ENST00000545663 IRF6O14896 467 aa19.98■□□□□ 0.79
CLSTN3-216ENST00000545663 SYN1P17600 705 aa19.98■□□□□ 0.79
CLSTN3-216ENST00000545663 DIS3LQ8TF46 1054 aaKnown RBP19.98■□□□□ 0.79
CLSTN3-216ENST00000545663 DEFB118Q96PH6 123 aa19.98■□□□□ 0.79
CLSTN3-216ENST00000545663 TDRD3Q9H7E2 651 aaKnown RBP19.98■□□□□ 0.79
CLSTN3-216ENST00000545663 GABRQQ9UN88 632 aa19.98■□□□□ 0.79
CLSTN3-216ENST00000545663 SNCAIPQ9Y6H5 919 aa19.98■□□□□ 0.79
CLSTN3-216ENST00000545663 CLSPNQ9HAW4 1339 aa19.98■□□□□ 0.79
CLSTN3-216ENST00000545663 TTC28Q96AY4 2481 aa19.97■□□□□ 0.79
CLSTN3-216ENST00000545663 GOLGA2Q08379 1002 aa19.97■□□□□ 0.79
CLSTN3-216ENST00000545663 GUCD1Q96NT3 240 aa19.97■□□□□ 0.79
CLSTN3-216ENST00000545663 ZCCHC17Q9NP64 241 aaKnown RBP19.97■□□□□ 0.79
CLSTN3-216ENST00000545663 ALPK3Q96L96 1907 aa19.96■□□□□ 0.79
CLSTN3-216ENST00000545663 TCP10L2B9ZVM9 353 aa19.96■□□□□ 0.79
CLSTN3-216ENST00000545663 MAGEA10P43363 369 aaPredicted RBP19.96■□□□□ 0.79
CLSTN3-216ENST00000545663 SPDYE2Q495Y8 402 aa19.96■□□□□ 0.79
CLSTN3-216ENST00000545663 HELBQ8NG08 1087 aaPredicted RBP19.96■□□□□ 0.79
CLSTN3-216ENST00000545663 ZKSCAN4Q969J2 545 aaPredicted RBP19.96■□□□□ 0.79
CLSTN3-216ENST00000545663 RAPGEFL1Q9UHV5 662 aa19.96■□□□□ 0.79
CLSTN3-216ENST00000545663 RPTORQ8N122 1335 aa19.96■□□□□ 0.79
CLSTN3-216ENST00000545663 ELNP15502 786 aa19.95■□□□□ 0.78
CLSTN3-216ENST00000545663 SNAPC2Q13487 334 aa19.95■□□□□ 0.78
CLSTN3-216ENST00000545663 TDHQ8IZJ6 230 aa19.95■□□□□ 0.78
CLSTN3-216ENST00000545663 IRS2Q9Y4H2 1338 aa19.95■□□□□ 0.78
CLSTN3-216ENST00000545663 TMPOP42166 694 aaKnown RBP19.94■□□□□ 0.78
CLSTN3-216ENST00000545663 KCNJ4P48050 445 aa19.94■□□□□ 0.78
CLSTN3-216ENST00000545663 DUSP27Q5VZP5 1158 aa19.94■□□□□ 0.78
CLSTN3-216ENST00000545663 ERO1BQ86YB8 467 aa19.94■□□□□ 0.78
CLSTN3-216ENST00000545663 FAM161BQ96MY7 647 aa19.94■□□□□ 0.78
CLSTN3-216ENST00000545663 ADGRA2Q96PE1 1338 aa19.94■□□□□ 0.78
CLSTN3-216ENST00000545663 PDHXO00330 501 aa19.93■□□□□ 0.78
CLSTN3-216ENST00000545663 COL9A1P20849 921 aa19.93■□□□□ 0.78
CLSTN3-216ENST00000545663 TNFAIP1Q13829 316 aa19.93■□□□□ 0.78
CLSTN3-216ENST00000545663 SLAIN1Q8ND83 568 aa19.93■□□□□ 0.78
CLSTN3-216ENST00000545663 ANKRD2Q9GZV1 360 aa19.93■□□□□ 0.78
CLSTN3-216ENST00000545663 ADCY3O60266 1144 aa19.92■□□□□ 0.78
CLSTN3-216ENST00000545663 INHAP05111 366 aa19.92■□□□□ 0.78
CLSTN3-216ENST00000545663 HOXB7P09629 217 aa19.92■□□□□ 0.78
CLSTN3-216ENST00000545663 IGHMBP2P38935 993 aaKnown RBP19.92■□□□□ 0.78
CLSTN3-216ENST00000545663 NEUROD2Q15784 382 aa19.92■□□□□ 0.78
CLSTN3-216ENST00000545663 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.92■□□□□ 0.78
CLSTN3-216ENST00000545663 PNNQ9H307 717 aaKnown RBP19.92■□□□□ 0.78
CLSTN3-216ENST00000545663 TAF5LO75529 589 aa19.91■□□□□ 0.78
CLSTN3-216ENST00000545663 CHRNDQ07001 517 aa19.91■□□□□ 0.78
CLSTN3-216ENST00000545663 NECAB2Q7Z6G3 386 aa19.91■□□□□ 0.78
CLSTN3-216ENST00000545663 METTL22Q9BUU2 404 aaPredicted RBP19.91■□□□□ 0.78
CLSTN3-216ENST00000545663 UBE2OQ9C0C9 1292 aaKnown RBP19.91■□□□□ 0.78
CLSTN3-216ENST00000545663 CRISPLD2Q9H0B8 497 aa19.91■□□□□ 0.78
CLSTN3-216ENST00000545663 IL1R1P14778 569 aa19.9■□□□□ 0.78
CLSTN3-216ENST00000545663 PPIL2Q13356 520 aa19.9■□□□□ 0.78
CLSTN3-216ENST00000545663 WRNIP1Q96S55 665 aa19.9■□□□□ 0.78
CLSTN3-216ENST00000545663 PAK6Q9NQU5 681 aaPredicted RBP19.9■□□□□ 0.78
CLSTN3-216ENST00000545663 POTEB2H3BUK9 544 aa19.89■□□□□ 0.77
CLSTN3-216ENST00000545663 IGKV5-2P06315 115 aa19.89■□□□□ 0.77
CLSTN3-216ENST00000545663 FLT3LGP49771 235 aa19.89■□□□□ 0.77
CLSTN3-216ENST00000545663 CACNB3P54284 484 aa19.89■□□□□ 0.77
CLSTN3-216ENST00000545663 FCGRTP55899 365 aa19.89■□□□□ 0.77
CLSTN3-216ENST00000545663 ANKRD23Q86SG2 305 aa19.89■□□□□ 0.77
CLSTN3-216ENST00000545663 DZIP1LQ8IYY4 767 aaKnown RBP19.89■□□□□ 0.77
CLSTN3-216ENST00000545663 ITGA6P23229 1130 aa19.88■□□□□ 0.77
CLSTN3-216ENST00000545663 FKBP1AP62942 108 aaKnown RBP19.88■□□□□ 0.77
CLSTN3-216ENST00000545663 LMOD3Q0VAK6 560 aa19.88■□□□□ 0.77
CLSTN3-216ENST00000545663 MOGSQ13724 837 aa19.88■□□□□ 0.77
CLSTN3-216ENST00000545663 MPHOSPH8Q99549 860 aa19.88■□□□□ 0.77
CLSTN3-216ENST00000545663 CYP2C8P10632 490 aa19.87■□□□□ 0.77
CLSTN3-216ENST00000545663 BCRP11274 1271 aa19.87■□□□□ 0.77
CLSTN3-216ENST00000545663 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
CLSTN3-216ENST00000545663 TTF2Q9UNY4 1162 aaKnown RBP19.87■□□□□ 0.77
CLSTN3-216ENST00000545663 MAP3K2Q9Y2U5 619 aa19.87■□□□□ 0.77
CLSTN3-216ENST00000545663 SERPINA10Q9UK55 444 aa19.86■□□□□ 0.77
CLSTN3-216ENST00000545663 TRIM35Q9UPQ4 493 aa19.86■□□□□ 0.77
CLSTN3-216ENST00000545663 ELL2O00472 640 aaPredicted RBP19.85■□□□□ 0.77
CLSTN3-216ENST00000545663 C15orf52Q6ZUT6 534 aaKnown RBP19.85■□□□□ 0.77
CLSTN3-216ENST00000545663 ZNF804AQ7Z570 1209 aa19.85■□□□□ 0.77
CLSTN3-216ENST00000545663 DNAH12Q6ZR08 3092 aa19.85■□□□□ 0.77
CLSTN3-216ENST00000545663 CDH23Q9H251 3354 aa19.84■□□□□ 0.77
CLSTN3-216ENST00000545663 INPP5BP32019 993 aa19.84■□□□□ 0.77
CLSTN3-216ENST00000545663 TNNI2P48788 182 aa19.84■□□□□ 0.77
CLSTN3-216ENST00000545663 PPATQ06203 517 aa19.84■□□□□ 0.77
CLSTN3-216ENST00000545663 CWF19L2Q2TBE0 894 aaKnown RBP19.84■□□□□ 0.77
CLSTN3-216ENST00000545663 UBE3BQ7Z3V4 1068 aa19.84■□□□□ 0.77
CLSTN3-216ENST00000545663 TAOK2Q9UL54 1235 aa19.84■□□□□ 0.77
CLSTN3-216ENST00000545663 ARAP2Q8WZ64 1704 aa19.83■□□□□ 0.77
CLSTN3-216ENST00000545663 CRKP46108 304 aa19.83■□□□□ 0.77
CLSTN3-216ENST00000545663 GRIK5Q16478 980 aa19.83■□□□□ 0.77
CLSTN3-216ENST00000545663 MFSD14BQ5SR56 506 aa19.83■□□□□ 0.77
CLSTN3-216ENST00000545663 FAM109BQ6ICB4 259 aaPredicted RBP19.83■□□□□ 0.77
CLSTN3-216ENST00000545663 GPAT2Q6NUI2 795 aa19.83■□□□□ 0.77
CLSTN3-216ENST00000545663 MIGA2Q7L4E1 593 aa19.83■□□□□ 0.77
CLSTN3-216ENST00000545663 PXYLP1Q8TE99 480 aa19.83■□□□□ 0.77
CLSTN3-216ENST00000545663 CCDC146Q8IYE0 955 aa19.82■□□□□ 0.76
CLSTN3-216ENST00000545663 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.82■□□□□ 0.766e-7■■■■□ 21.6
CLSTN3-216ENST00000545663 H7C1W4 665 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms