RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 CCDC85BQ15834 202 aaPredicted RBP9.35□□□□□ -0.91
COPA-206ENST00000545266 RSRP1Q9BUV0 290 aa9.35□□□□□ -0.91
COPA-206ENST00000545266 ADAM11O75078 769 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 FBXO24O75426 580 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 CELA3AP09093 270 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 SPATA31C1P0DKV0 1188 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 RLBP1P12271 317 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 BMP6P22004 513 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 NME2P22392 152 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 ZNF76P36508 570 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 FOXD4L6Q3SYB3 417 aaPredicted RBP9.34□□□□□ -0.91
COPA-206ENST00000545266 SCARA3Q6AZY7 606 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 FOXD4L3Q6VB84 417 aaPredicted RBP9.34□□□□□ -0.91
COPA-206ENST00000545266 PDZD3Q86UT5 571 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 CARD10Q9BWT7 1032 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 CACNA2D2Q9NY47 1150 aa9.34□□□□□ -0.91
COPA-206ENST00000545266 GPN3Q9UHW5 284 aaPredicted RBP9.34□□□□□ -0.91
COPA-206ENST00000545266 PAGE1O75459 146 aa9.33□□□□□ -0.92
COPA-206ENST00000545266 TCF3P15923 654 aa9.33□□□□□ -0.92
COPA-206ENST00000545266 RPS26P62854 115 aaKnown RBP9.33□□□□□ -0.92
COPA-206ENST00000545266 PRRT3Q5FWE3 981 aa9.33□□□□□ -0.92
COPA-206ENST00000545266 IGF2-ASQ6U949 168 aa9.33□□□□□ -0.92
COPA-206ENST00000545266 SLC7A3Q8WY07 619 aa9.33□□□□□ -0.92
COPA-206ENST00000545266 KCNK4Q9NYG8 393 aa9.33□□□□□ -0.92
COPA-206ENST00000545266 CYP11A1P05108 521 aa9.32□□□□□ -0.92
COPA-206ENST00000545266 ARNTP27540 789 aa9.32□□□□□ -0.92
COPA-206ENST00000545266 HDLBPQ00341 1268 aaKnown RBP9.32□□□□□ -0.92
COPA-206ENST00000545266 GSTM4Q03013 218 aa9.32□□□□□ -0.92
COPA-206ENST00000545266 ZNF252P-AS1Q0IIN9 211 aa9.32□□□□□ -0.92
COPA-206ENST00000545266 STK35Q8TDR2 534 aa9.32□□□□□ -0.92
COPA-206ENST00000545266 ZNF157P51786 506 aaPredicted RBP9.31□□□□□ -0.92
COPA-206ENST00000545266 AGMOQ6ZNB7 445 aa9.31□□□□□ -0.92
COPA-206ENST00000545266 SULF2Q8IWU5 870 aa9.31□□□□□ -0.92
COPA-206ENST00000545266 TMEM130Q8N3G9 435 aa9.31□□□□□ -0.92
COPA-206ENST00000545266 RNF34Q969K3 372 aa9.31□□□□□ -0.92
COPA-206ENST00000545266 SAMM50Q9Y512 469 aa9.31□□□□□ -0.92
COPA-206ENST00000545266 FAM229AH3BQW9 127 aa9.3□□□□□ -0.92
COPA-206ENST00000545266 SELPP16109 830 aa9.3□□□□□ -0.92
COPA-206ENST00000545266 RASIP1Q5U651 963 aa9.3□□□□□ -0.92
COPA-206ENST00000545266 HS2ST1Q7LGA3 356 aa9.3□□□□□ -0.92
COPA-206ENST00000545266 LENG1Q96BZ8 264 aaPredicted RBP9.3□□□□□ -0.92
COPA-206ENST00000545266 EMILIN2Q9BXX0 1053 aa9.3□□□□□ -0.92
COPA-206ENST00000545266 CYP8B1Q9UNU6 501 aa9.3□□□□□ -0.92
COPA-206ENST00000545266 LOC100289279A0A1B0GTE1 492 aa9.29□□□□□ -0.92
COPA-206ENST00000545266 MEGF11A6BM72 1044 aa9.29□□□□□ -0.92
COPA-206ENST00000545266 RNF225M0QZC1 329 aaPredicted RBP9.29□□□□□ -0.92
COPA-206ENST00000545266 DDX3YO15523 660 aaKnown RBP9.29□□□□□ -0.92
COPA-206ENST00000545266 GSK3AP49840 483 aa9.29□□□□□ -0.92
COPA-206ENST00000545266 LIG3P49916 1009 aa9.29□□□□□ -0.92
COPA-206ENST00000545266 PWP1Q13610 501 aa9.29□□□□□ -0.92
COPA-206ENST00000545266 POU4F3Q15319 338 aa9.29□□□□□ -0.92
COPA-206ENST00000545266 PCNX4Q63HM2 1172 aa9.29□□□□□ -0.92
COPA-206ENST00000545266 PHC3Q8NDX5 983 aa9.29□□□□□ -0.92
COPA-206ENST00000545266 KCNQ5Q9NR82 932 aa9.29□□□□□ -0.92
COPA-206ENST00000545266 KRT82Q9NSB4 513 aa9.29□□□□□ -0.92
COPA-206ENST00000545266 SYNGAP1Q96PV0 1343 aa9.29□□□□□ -0.92
COPA-206ENST00000545266 DLGAP3O95886 979 aa9.28□□□□□ -0.92
COPA-206ENST00000545266 GSTP1P09211 210 aaKnown RBP9.28□□□□□ -0.92
COPA-206ENST00000545266 MAOBP27338 520 aa9.28□□□□□ -0.92
COPA-206ENST00000545266 KCNMA1Q12791 1236 aa9.28□□□□□ -0.92
COPA-206ENST00000545266 TTBK2Q6IQ55 1244 aa9.28□□□□□ -0.92
COPA-206ENST00000545266 RHOVQ96L33 236 aa9.28□□□□□ -0.92
COPA-206ENST00000545266 TMEM74Q96NL1 305 aa9.28□□□□□ -0.92
COPA-206ENST00000545266 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
COPA-206ENST00000545266 WISP1O95388 367 aa9.27□□□□□ -0.93
COPA-206ENST00000545266 CTSBP07858 339 aa9.27□□□□□ -0.93
COPA-206ENST00000545266 NLRP12P59046 1061 aa9.27□□□□□ -0.93
COPA-206ENST00000545266 RAD51AP2Q09MP3 1159 aa9.27□□□□□ -0.93
COPA-206ENST00000545266 LRRC14Q15048 493 aa9.27□□□□□ -0.93
COPA-206ENST00000545266 GRIK4Q16099 956 aa9.27□□□□□ -0.93
COPA-206ENST00000545266 KIAA1211Q6ZU35 1233 aa9.27□□□□□ -0.93
COPA-206ENST00000545266 GGT7Q9UJ14 662 aa9.27□□□□□ -0.93
COPA-206ENST00000545266 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.26□□□□□ -0.93
COPA-206ENST00000545266 CCDC84Q86UT8 332 aaPredicted RBP9.26□□□□□ -0.93
COPA-206ENST00000545266 UBASH3BQ8TF42 649 aa9.26□□□□□ -0.93
COPA-206ENST00000545266 CORO1BQ9BR76 489 aa9.26□□□□□ -0.93
COPA-206ENST00000545266 TMPRSS13Q9BYE2 586 aa9.26□□□□□ -0.93
COPA-206ENST00000545266 COPRSQ9NQ92 184 aa9.26□□□□□ -0.93
COPA-206ENST00000545266 KBTBD4Q9NVX7 518 aa9.26□□□□□ -0.93
COPA-206ENST00000545266 DDX41Q9UJV9 622 aaKnown RBP9.26□□□□□ -0.93
COPA-206ENST00000545266 C9orf172C9J069 976 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 TRIM37O94972 964 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 ECEL1O95672 775 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 DUOXA2Q1HG44 320 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 LLGL2Q6P1M3 1020 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 SHISA2Q6UWI4 295 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 Q6ZS46 218 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 NT5DC4Q86YG4 428 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 RELL1Q8IUW5 271 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 GRIN3AQ8TCU5 1115 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 NACC1Q96RE7 527 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 SUGCTQ9HAC7 445 aa9.25□□□□□ -0.93
COPA-206ENST00000545266 F8W735 103 aaPredicted RBP9.24□□□□□ -0.93
COPA-206ENST00000545266 TFE3P19532 575 aaPredicted RBP9.24□□□□□ -0.93
COPA-206ENST00000545266 GARTP22102 1010 aa9.24□□□□□ -0.93
COPA-206ENST00000545266 NRG1Q02297 640 aaPredicted RBP9.24□□□□□ -0.93
COPA-206ENST00000545266 LMNB2Q03252 620 aa9.24□□□□□ -0.93
COPA-206ENST00000545266 EXOSC6Q5RKV6 272 aaKnown RBP9.24□□□□□ -0.93
COPA-206ENST00000545266 HP1BP3Q5SSJ5 553 aaPredicted RBP9.24□□□□□ -0.93
COPA-206ENST00000545266 DCAF5Q96JK2 942 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms