RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 JAG2Q9Y219 1238 aa12.71□□□□□ -0.37
NPIPB4-217ENST00000543449 SALL1Q9NSC2 1324 aa12.7□□□□□ -0.38
NPIPB4-217ENST00000543449 SLC10A3P09131 477 aa12.7□□□□□ -0.38
NPIPB4-217ENST00000543449 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
NPIPB4-217ENST00000543449 SPTY2D1Q68D10 685 aaPredicted RBP12.7□□□□□ -0.38
NPIPB4-217ENST00000543449 HHIPL2Q6UWX4 724 aa12.7□□□□□ -0.38
NPIPB4-217ENST00000543449 SLF2Q8IX21 1173 aa12.7□□□□□ -0.38
NPIPB4-217ENST00000543449 PRMT6Q96LA8 375 aaPredicted RBP12.7□□□□□ -0.38
NPIPB4-217ENST00000543449 ZDHHC15Q96MV8 337 aa12.7□□□□□ -0.38
NPIPB4-217ENST00000543449 VEZTQ9HBM0 779 aa12.7□□□□□ -0.38
NPIPB4-217ENST00000543449 IQSEC3Q9UPP2 1182 aaPredicted RBP12.7□□□□□ -0.38
NPIPB4-217ENST00000543449 POLR2AP24928 1970 aaKnown RBP12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 ARAP2Q8WZ64 1704 aa12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 A0A1B0GUL7 405 aa12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 FOXN1O15353 648 aa12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 IGSF3O75054 1194 aa12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 OS9Q13438 667 aaPredicted RBP12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 POLA2Q14181 598 aa12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 GORABQ5T7V8 394 aa12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 FKBP1CQ5VVH2 108 aa12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 SSH3Q8TE77 659 aa12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 GPR108Q9NPR9 543 aa12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 ZNF70Q9UC06 446 aaPredicted RBP12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 RCAN3Q9UKA8 241 aa12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 DDX19BQ9UMR2 479 aa12.69□□□□□ -0.38
NPIPB4-217ENST00000543449 LDHBP07195 334 aaKnown RBP12.68□□□□□ -0.38
NPIPB4-217ENST00000543449 UQCRFS1P1P0C7P4 283 aa12.68□□□□□ -0.38
NPIPB4-217ENST00000543449 IREB2P48200 963 aaKnown RBP12.68□□□□□ -0.38
NPIPB4-217ENST00000543449 TFCP2Q12800 502 aa12.68□□□□□ -0.38
NPIPB4-217ENST00000543449 MAP3K11Q16584 847 aa12.68□□□□□ -0.38
NPIPB4-217ENST00000543449 HSP90AB4PQ58FF6 505 aa12.68□□□□□ -0.38
NPIPB4-217ENST00000543449 CCDC102BQ68D86 513 aa12.68□□□□□ -0.38
NPIPB4-217ENST00000543449 SAGE1Q9NXZ1 904 aa12.68□□□□□ -0.38
NPIPB4-217ENST00000543449 TNNQ9UQP3 1299 aa12.68□□□□□ -0.38
NPIPB4-217ENST00000543449 PNMA6EA0A0J9YXQ4 647 aa12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 CLRN2A0PK11 232 aa12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 FAM155AB1AL88 458 aaPredicted RBP12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 AOC2O75106 756 aa12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 RASA3Q14644 834 aa12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 DLK2Q6UY11 383 aa12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 ERC1Q8IUD2 1116 aa12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 XAGE2Q96GT9 111 aa12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 NEUROD6Q96NK8 337 aa12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 TDRD3Q9H7E2 651 aaKnown RBP12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 NOP58Q9Y2X3 529 aaKnown RBP12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 ECM29Q5VYK3 1845 aa12.67□□□□□ -0.38
NPIPB4-217ENST00000543449 UBE2Q2LH0YL09 131 aa12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 HMMRO75330 724 aa12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 SURF6O75683 361 aaKnown RBP12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 RLBP1P12271 317 aa12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 PHKA1P46020 1223 aa12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 TIMM10P62072 90 aa12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 CCDC158Q5M9N0 1113 aa12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 IFFO2Q5TF58 517 aa12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 FAM83AQ86UY5 434 aa12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 RASAL3Q86YV0 1011 aa12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 RPAP2Q8IXW5 612 aaPredicted RBP12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 ANGEL1Q9UNK9 670 aaKnown RBP12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 CEP350Q5VT06 3117 aa12.66□□□□□ -0.38
NPIPB4-217ENST00000543449 HSPA8P11142 646 aaKnown RBP12.65□□□□□ -0.38
NPIPB4-217ENST00000543449 INHBEP58166 350 aa12.65□□□□□ -0.38
NPIPB4-217ENST00000543449 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
NPIPB4-217ENST00000543449 SREBF2Q12772 1141 aa12.65□□□□□ -0.38
NPIPB4-217ENST00000543449 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
NPIPB4-217ENST00000543449 LDLRAD1Q5T700 205 aa12.65□□□□□ -0.38
NPIPB4-217ENST00000543449 PRAMEF18Q5VWM3 479 aa12.65□□□□□ -0.38
NPIPB4-217ENST00000543449 TNS4Q8IZW8 715 aa12.65□□□□□ -0.38
NPIPB4-217ENST00000543449 MAP4K4O95819 1239 aaPredicted RBP12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 LDHCP07864 332 aa12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 ZBTB48P10074 688 aaPredicted RBP12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 LBX1P52954 281 aa12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 GSTO1P78417 241 aa12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 COL13A1Q5TAT6 717 aaPredicted RBP12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 CEP85Q6P2H3 762 aa12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 ERICH6Q7L0X2 663 aa12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 DZIP1Q86YF9 867 aaKnown RBP12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 ANKRD13AQ8IZ07 590 aa12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 PANK1Q8TE04 598 aa12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 SLC10A4Q96EP9 437 aa12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 SCAF8Q9UPN6 1271 aaKnown RBP12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 PCDHAC2Q9Y5I4 1007 aa12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 RPAP1Q9BWH6 1393 aaPredicted RBP12.64□□□□□ -0.39
NPIPB4-217ENST00000543449 TCP10L2B9ZVM9 353 aa12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 ALDH1A1P00352 501 aa12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 ARID4AP29374 1257 aaPredicted RBP12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 PRDX5P30044 214 aa12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 ADORA1P30542 326 aa12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 RASGRF1Q13972 1273 aa12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 TNNI3KQ59H18 835 aa12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 DCAF15Q66K64 600 aa12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 APOBEC3HQ6NTF7 200 aaKnown RBP12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 SPATA5Q8NB90 893 aa12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 FAM163AQ96GL9 167 aaPredicted RBP12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 ZNF512BQ96KM6 892 aaPredicted RBP12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 ABCF2Q9UG63 623 aa12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 FPGT-TNNI3KV9GXZ4 949 aa12.63□□□□□ -0.39
NPIPB4-217ENST00000543449 MYH13Q9UKX3 1938 aa12.62□□□□□ -0.39
NPIPB4-217ENST00000543449 MANSC4A6NHS7 340 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms