RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 IL15P40933 162 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 PIP4K2AP48426 406 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 EVCP57679 992 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 CABP4P57796 275 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 STK3Q13188 491 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 ATL3Q6DD88 541 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 TMEM92Q6UXU6 159 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 DDX46Q7L014 1031 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 PLA2G4DQ86XP0 818 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 FNBP4Q8N3X1 1017 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 DNAJC2Q99543 621 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 PAG1Q9NWQ8 432 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 RCOR1Q9UKL0 485 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 CFAP45Q9UL16 551 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 PYCARDQ9ULZ3 195 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 NDUFB9Q9Y6M9 179 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 TNS2Q63HR2 1409 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 AFF2P51816 1311 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 SPATA31A3Q5VYP0 1347 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 GOLGA6L4A6NEF3 574 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 ERVV-2B6SEH9 535 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 EYA2O00167 538 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 EVI5O60447 810 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 PLCG2P16885 1265 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 CAMK4Q16566 473 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 ANO6Q4KMQ2 910 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 LUZP1Q86V48 1076 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 DDX60Q8IY21 1712 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 C17orf53Q8N3J3 647 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 MPNDQ8N594 471 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 CCDC191Q8NCU4 936 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 ZNF274Q96GC6 653 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 POM121Q96HA1 1249 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 PHOX2BQ99453 314 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 CWC25Q9NXE8 425 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 FAM205CA6NFA0 338 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 E7EWF7 191 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 GOLIM4O00461 696 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 RNF113AO15541 343 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 CSB-PGBD3P0DP91 1061 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 HSPD1P10809 573 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 CDC25BP30305 580 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 ZNF75DP51815 510 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 RBM6P78332 1123 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 IQCB1Q15051 598 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 SKIV2LQ15477 1246 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 SARM1Q6SZW1 724 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 TTLL7Q6ZT98 887 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 CKAP2LQ8IYA6 745 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 DDX17Q92841 729 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 CHMP4CQ96CF2 233 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 QTRT2Q9H974 415 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 CDHR5Q9HBB8 845 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 NPDC1Q9NQX5 325 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 FAM13BQ9NYF5 915 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 MAST3O60307 1309 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 SHANK3Q9BYB0 1731 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 NWD2Q9ULI1 1742 aa6.1□□□□□ -1.43
ATPAF1-212ENST00000542495 PTPDC1A2A3K4 754 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 H3BQV1 296 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 CTAGE5O15320 804 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 TBC1D12O60347 775 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 HSP90B1P14625 803 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 PDIA3P30101 505 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 TIMM10P62072 90 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 APOBRQ0VD83 1088 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 TRIM28Q13263 835 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 SNW1Q13573 536 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 CHRNA2Q15822 529 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 LRRC24Q50LG9 513 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 IFFO2Q5TF58 517 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 ZNF710Q8N1W2 664 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 RGS22Q8NE09 1264 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 ENGASEQ8NFI3 743 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 BICD2Q8TD16 824 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 CABLES1Q8TDN4 633 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 DDX11Q96FC9 970 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 C8orf37Q96NL8 207 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 ISCA1Q9BUE6 129 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 LRRC2Q9BYS8 371 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 GPCPD1Q9NPB8 672 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 CHMP3Q9Y3E7 222 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 KIF3AQ9Y496 699 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 PCDH11XQ9BZA7 1347 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 PCDH11YQ9BZA8 1340 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 ABCC12Q96J65 1359 aa6.09□□□□□ -1.43
ATPAF1-212ENST00000542495 A0A0G2JLW4 131 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 A0A1B0GUL7 405 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 M0R2C6 588 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 FOXP2O15409 715 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 A1BGP04217 495 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 IFIT1P09914 478 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 FDPSP14324 419 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 PTGS1P23219 599 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 ZNF165P49910 485 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 MDM2Q00987 491 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 SLFNL1Q499Z3 407 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 DNTTIP2Q5QJE6 756 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms