RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 BCAMP50895 628 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 INTS5Q6P9B9 1019 aaKnown RBP17.28■□□□□ 0.36
DDX55-209ENST00000542286 C11orf57Q6ZUT1 292 aaPredicted RBP17.28■□□□□ 0.36
DDX55-209ENST00000542286 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.28■□□□□ 0.36
DDX55-209ENST00000542286 CLIC4Q9Y696 253 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 RASGRF1Q13972 1273 aa17.27■□□□□ 0.36
DDX55-209ENST00000542286 CCDC24Q8N4L8 307 aa17.27■□□□□ 0.36
DDX55-209ENST00000542286 LLPHQ9BRT6 129 aaKnown RBP17.27■□□□□ 0.36
DDX55-209ENST00000542286 ARMT1Q9H993 441 aa17.27■□□□□ 0.36
DDX55-209ENST00000542286 ORC3Q9UBD5 711 aaPredicted RBP17.27■□□□□ 0.36
DDX55-209ENST00000542286 CDHR2Q9BYE9 1310 aa17.27■□□□□ 0.36
DDX55-209ENST00000542286 A0A1B0GVL5 298 aa17.27■□□□□ 0.35
DDX55-209ENST00000542286 KIF20AO95235 890 aa17.27■□□□□ 0.35
DDX55-209ENST00000542286 MICU3Q86XE3 530 aa17.27■□□□□ 0.35
DDX55-209ENST00000542286 MAGEB6Q8N7X4 407 aa17.27■□□□□ 0.35
DDX55-209ENST00000542286 MIGA1Q8NAN2 632 aa17.27■□□□□ 0.35
DDX55-209ENST00000542286 ZKSCAN3Q9BRR0 538 aa17.27■□□□□ 0.35
DDX55-209ENST00000542286 NUP98P52948 1817 aa17.27■□□□□ 0.35
DDX55-209ENST00000542286 DISP2A7MBM2 1401 aa17.27■□□□□ 0.35
DDX55-209ENST00000542286 NEDD4P46934 1319 aa17.26■□□□□ 0.35
DDX55-209ENST00000542286 ZNF34Q8IZ26 560 aa17.26■□□□□ 0.35
DDX55-209ENST00000542286 MARCH10Q8NA82 808 aaPredicted RBP17.26■□□□□ 0.35
DDX55-209ENST00000542286 NCOA7Q8NI08 942 aa17.26■□□□□ 0.35
DDX55-209ENST00000542286 ZNF274Q96GC6 653 aaPredicted RBP17.26■□□□□ 0.35
DDX55-209ENST00000542286 ZSCAN16Q9H4T2 348 aaPredicted RBP17.26■□□□□ 0.35
DDX55-209ENST00000542286 EP400Q96L91 3159 aa17.26■□□□□ 0.35
DDX55-209ENST00000542286 PTGS1P23219 599 aa17.26■□□□□ 0.35
DDX55-209ENST00000542286 PTF1AQ7RTS3 328 aa17.26■□□□□ 0.35
DDX55-209ENST00000542286 CTNNA3Q9UI47 895 aa17.26■□□□□ 0.35
DDX55-209ENST00000542286 CPLX1O14810 134 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 ZFYP08048 801 aaPredicted RBP17.25■□□□□ 0.35
DDX55-209ENST00000542286 LRMPQ12912 555 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 NAA16Q6N069 864 aaPredicted RBP17.25■□□□□ 0.35
DDX55-209ENST00000542286 BICDL1Q6ZP65 573 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 CCDC82Q8N4S0 544 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 CFAP45Q9UL16 551 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 LRP6O75581 1613 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 MBD4O95243 580 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 ZNF165P49910 485 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 DDB1Q16531 1140 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 RRP12Q5JTH9 1297 aaKnown RBP17.25■□□□□ 0.35
DDX55-209ENST00000542286 C3orf67Q6ZVT6 689 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 CMTR1Q8N1G2 835 aaKnown RBP17.25■□□□□ 0.35
DDX55-209ENST00000542286 FSIP1Q8NA03 581 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 C8orf76Q96K31 380 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 EPB41L4AQ9HCS5 686 aaPredicted RBP17.25■□□□□ 0.35
DDX55-209ENST00000542286 DDX19AQ9NUU7 478 aaKnown RBP17.25■□□□□ 0.35
DDX55-209ENST00000542286 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 COL4A1P02462 1669 aa17.25■□□□□ 0.35
DDX55-209ENST00000542286 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
DDX55-209ENST00000542286 CDC27P30260 824 aa17.24■□□□□ 0.35
DDX55-209ENST00000542286 IL6STP40189 918 aaPredicted RBP17.24■□□□□ 0.35
DDX55-209ENST00000542286 SNW1Q13573 536 aaKnown RBP17.24■□□□□ 0.35
DDX55-209ENST00000542286 MPHOSPH8Q99549 860 aa17.24■□□□□ 0.35
DDX55-209ENST00000542286 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.24■□□□□ 0.357e-8■■□□□ 14.4
DDX55-209ENST00000542286 PCDHA7Q9UN72 937 aa17.24■□□□□ 0.35
DDX55-209ENST00000542286 NIP7Q9Y221 180 aaKnown RBP eCLIP17.24■□□□□ 0.35
DDX55-209ENST00000542286 EIF5P55010 431 aaKnown RBP17.24■□□□□ 0.35
DDX55-209ENST00000542286 AIDAQ96BJ3 306 aa17.24■□□□□ 0.35
DDX55-209ENST00000542286 BCL2L12Q9HB09 334 aa17.24■□□□□ 0.35
DDX55-209ENST00000542286 RCOR1Q9UKL0 485 aa17.24■□□□□ 0.35
DDX55-209ENST00000542286 SPATA5Q8NB90 893 aa17.23■□□□□ 0.35
DDX55-209ENST00000542286 TOMM22Q9NS69 142 aa17.23■□□□□ 0.35
DDX55-209ENST00000542286 LOC102724428A0A0B4J2F2 783 aa17.23■□□□□ 0.35
DDX55-209ENST00000542286 TCRBV5S4A2TA0A5A2 114 aa17.23■□□□□ 0.35
DDX55-209ENST00000542286 SIK1P57059 783 aa17.23■□□□□ 0.35
DDX55-209ENST00000542286 PUM3Q15397 648 aaKnown RBP17.23■□□□□ 0.35
DDX55-209ENST00000542286 ISM2Q6H9L7 571 aa17.23■□□□□ 0.35
DDX55-209ENST00000542286 DRC7Q8IY82 874 aa17.23■□□□□ 0.35
DDX55-209ENST00000542286 TRIM5Q9C035 493 aa17.23■□□□□ 0.35
DDX55-209ENST00000542286 FBXO3Q9UK99 471 aa17.23■□□□□ 0.35
DDX55-209ENST00000542286 MARCKSP29966 332 aaPredicted RBP17.23■□□□□ 0.35
DDX55-209ENST00000542286 SLC51AQ86UW1 340 aa17.23■□□□□ 0.35
DDX55-209ENST00000542286 CCDC87Q9NVE4 849 aa17.23■□□□□ 0.35
DDX55-209ENST00000542286 FAM182BQ5T319 152 aa17.22■□□□□ 0.35
DDX55-209ENST00000542286 STRBPQ96SI9 672 aaKnown RBP17.22■□□□□ 0.35
DDX55-209ENST00000542286 FGFR2P21802 821 aa17.22■□□□□ 0.35
DDX55-209ENST00000542286 PIP4K2BP78356 416 aa17.22■□□□□ 0.35
DDX55-209ENST00000542286 ARID5BQ14865 1188 aa17.22■□□□□ 0.35
DDX55-209ENST00000542286 LRRFIP1Q32MZ4 808 aaKnown RBP17.22■□□□□ 0.35
DDX55-209ENST00000542286 LCORLQ8N3X6 602 aa17.22■□□□□ 0.35
DDX55-209ENST00000542286 PDCL2Q8N4E4 241 aa17.22■□□□□ 0.35
DDX55-209ENST00000542286 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
DDX55-209ENST00000542286 SPTLC3Q9NUV7 552 aa17.22■□□□□ 0.35
DDX55-209ENST00000542286 BIN1O00499 593 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 NDUFA8P51970 172 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 TRDNQ13061 729 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 LPIN2Q92539 896 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 MYH3P11055 1940 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 MYH7P12883 1935 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 TAF1P21675 1872 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 DOT1LQ8TEK3 1739 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 CAMTA2O94983 1202 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 NFXL1Q6ZNB6 911 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 RBM43Q6ZSC3 357 aaKnown RBP17.21■□□□□ 0.35
DDX55-209ENST00000542286 ADGRA1Q86SQ6 560 aa17.21■□□□□ 0.35
DDX55-209ENST00000542286 UTP14AQ9BVJ6 771 aaKnown RBP17.21■□□□□ 0.35
DDX55-209ENST00000542286 MYH14Q7Z406 1995 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms