RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 TDRD3Q9H7E2 651 aaKnown RBP16.56■□□□□ 0.24
SCARB1-207ENST00000541661 EFCC1Q9HA90 598 aa16.56■□□□□ 0.24
SCARB1-207ENST00000541661 MRS2Q9HD23 443 aa16.56■□□□□ 0.24
SCARB1-207ENST00000541661 SALL2Q9Y467 1007 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-207ENST00000541661 RIPOR2Q9Y4F9 1068 aa16.56■□□□□ 0.24
SCARB1-207ENST00000541661 PUS3Q9BZE2 481 aaKnown RBP16.55■□□□□ 0.24
SCARB1-207ENST00000541661 ELP3Q9H9T3 547 aa16.55■□□□□ 0.24
SCARB1-207ENST00000541661 UTYO14607 1347 aa16.54■□□□□ 0.24
SCARB1-207ENST00000541661 MROH5Q6ZUA9 1318 aa16.54■□□□□ 0.24
SCARB1-207ENST00000541661 CRKP46108 304 aa16.54■□□□□ 0.24
SCARB1-207ENST00000541661 HDLBPQ00341 1268 aaKnown RBP16.54■□□□□ 0.24
SCARB1-207ENST00000541661 CAP1Q01518 475 aa16.54■□□□□ 0.24
SCARB1-207ENST00000541661 FBXO33Q7Z6M2 555 aa16.54■□□□□ 0.24
SCARB1-207ENST00000541661 CDAN1Q8IWY9 1227 aa16.54■□□□□ 0.24
SCARB1-207ENST00000541661 SUCLG2Q96I99 432 aa16.54■□□□□ 0.24
SCARB1-207ENST00000541661 BRCA2P51587 3418 aa16.54■□□□□ 0.24
SCARB1-207ENST00000541661 TNNI2P48788 182 aa16.53■□□□□ 0.24
SCARB1-207ENST00000541661 MAP3K9P80192 1104 aa16.53■□□□□ 0.24
SCARB1-207ENST00000541661 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
SCARB1-207ENST00000541661 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCARB1-207ENST00000541661 MRIQ9BWK5 157 aa16.53■□□□□ 0.24
SCARB1-207ENST00000541661 TMEM39BQ9GZU3 492 aa16.53■□□□□ 0.24
SCARB1-207ENST00000541661 TCP10L2B9ZVM9 353 aa16.52■□□□□ 0.24
SCARB1-207ENST00000541661 NBPF7P0C2Y1 421 aaPredicted RBP16.52■□□□□ 0.24
SCARB1-207ENST00000541661 GTF2A2P52657 109 aa16.52■□□□□ 0.24
SCARB1-207ENST00000541661 VGLL4Q14135 290 aa16.52■□□□□ 0.24
SCARB1-207ENST00000541661 GRIK5Q16478 980 aa16.52■□□□□ 0.24
SCARB1-207ENST00000541661 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
SCARB1-207ENST00000541661 BRI3BPQ8WY22 251 aa16.52■□□□□ 0.24
SCARB1-207ENST00000541661 ARHGEF6Q15052 776 aa16.51■□□□□ 0.23
SCARB1-207ENST00000541661 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
SCARB1-207ENST00000541661 TBC1D22AQ8WUA7 517 aa16.51■□□□□ 0.23
SCARB1-207ENST00000541661 ZFYVE28Q9HCC9 887 aa16.51■□□□□ 0.23
SCARB1-207ENST00000541661 KIAA0100Q14667 2235 aaKnown RBP16.5■□□□□ 0.23
SCARB1-207ENST00000541661 CCL15-CCL14A0A0B4J2E2 113 aa16.5■□□□□ 0.23
SCARB1-207ENST00000541661 TAF1CQ15572 869 aaPredicted RBP16.5■□□□□ 0.23
SCARB1-207ENST00000541661 CCL15Q16663 113 aa16.5■□□□□ 0.23
SCARB1-207ENST00000541661 VPS37DQ86XT2 251 aa16.5■□□□□ 0.23
SCARB1-207ENST00000541661 VGLL2Q8N8G2 317 aa16.5■□□□□ 0.23
SCARB1-207ENST00000541661 ZNF333Q96JL9 665 aa16.5■□□□□ 0.23
SCARB1-207ENST00000541661 BICC1Q9H694 974 aaKnown RBP16.5■□□□□ 0.23
SCARB1-207ENST00000541661 CSADQ9Y600 493 aa16.5■□□□□ 0.23
SCARB1-207ENST00000541661 SPDYE5A6NIY4 337 aa16.49■□□□□ 0.23
SCARB1-207ENST00000541661 PDE8BO95263 885 aa16.49■□□□□ 0.23
SCARB1-207ENST00000541661 EN2P19622 333 aaPredicted RBP16.49■□□□□ 0.23
SCARB1-207ENST00000541661 LRRC24Q50LG9 513 aa16.49■□□□□ 0.23
SCARB1-207ENST00000541661 CAVIN4Q5BKX8 364 aa16.49■□□□□ 0.23
SCARB1-207ENST00000541661 FKBP1CQ5VVH2 108 aa16.49■□□□□ 0.23
SCARB1-207ENST00000541661 FAM83AQ86UY5 434 aa16.49■□□□□ 0.23
SCARB1-207ENST00000541661 FAM43AQ8N2R8 423 aa16.49■□□□□ 0.23
SCARB1-207ENST00000541661 TEKT1Q969V4 418 aa16.49■□□□□ 0.23
SCARB1-207ENST00000541661 ZDHHC15Q96MV8 337 aa16.49■□□□□ 0.23
SCARB1-207ENST00000541661 ZCCHC17Q9NP64 241 aaKnown RBP16.49■□□□□ 0.23
SCARB1-207ENST00000541661 HABP4Q5JVS0 413 aaKnown RBP16.48■□□□□ 0.23
SCARB1-207ENST00000541661 NBPF11Q86T75 865 aa16.48■□□□□ 0.23
SCARB1-207ENST00000541661 ERO1BQ86YB8 467 aa16.48■□□□□ 0.23
SCARB1-207ENST00000541661 ANKRD44Q8N8A2 993 aa16.48■□□□□ 0.23
SCARB1-207ENST00000541661 OTUD5Q96G74 571 aa16.48■□□□□ 0.23
SCARB1-207ENST00000541661 IQSEC3Q9UPP2 1182 aaPredicted RBP16.48■□□□□ 0.23
SCARB1-207ENST00000541661 SUGT1Q9Y2Z0 365 aa16.48■□□□□ 0.23
SCARB1-207ENST00000541661 KIF16BQ96L93 1317 aa16.47■□□□□ 0.23
SCARB1-207ENST00000541661 ANP32CO43423 234 aa16.47■□□□□ 0.23
SCARB1-207ENST00000541661 CETPP11597 493 aa16.47■□□□□ 0.23
SCARB1-207ENST00000541661 CHAF1AQ13111 956 aaPredicted RBP16.47■□□□□ 0.23
SCARB1-207ENST00000541661 METTL24Q5JXM2 366 aa16.47■□□□□ 0.23
SCARB1-207ENST00000541661 APOBEC3HQ6NTF7 200 aaKnown RBP16.47■□□□□ 0.23
SCARB1-207ENST00000541661 HOOK2Q96ED9 719 aa16.47■□□□□ 0.23
SCARB1-207ENST00000541661 TMEM106CQ9BVX2 250 aa16.47■□□□□ 0.23
SCARB1-207ENST00000541661 PTCH2Q9Y6C5 1203 aa16.47■□□□□ 0.23
SCARB1-207ENST00000541661 SNCAIPQ9Y6H5 919 aa16.47■□□□□ 0.23
SCARB1-207ENST00000541661 TLR2O60603 784 aa16.46■□□□□ 0.23
SCARB1-207ENST00000541661 FRAT2O75474 233 aaPredicted RBP16.46■□□□□ 0.23
SCARB1-207ENST00000541661 WDHD1O75717 1129 aaPredicted RBP16.46■□□□□ 0.23
SCARB1-207ENST00000541661 FGFR2P21802 821 aa16.46■□□□□ 0.23
SCARB1-207ENST00000541661 BCAMP50895 628 aa16.46■□□□□ 0.23
SCARB1-207ENST00000541661 CACNB3P54284 484 aa16.46■□□□□ 0.23
SCARB1-207ENST00000541661 SLC9C1Q4G0N8 1177 aa16.46■□□□□ 0.23
SCARB1-207ENST00000541661 HHIPL2Q6UWX4 724 aa16.46■□□□□ 0.23
SCARB1-207ENST00000541661 MAST3O60307 1309 aa16.45■□□□□ 0.22
SCARB1-207ENST00000541661 PPIL2Q13356 520 aa16.45■□□□□ 0.22
SCARB1-207ENST00000541661 MRPL50Q8N5N7 158 aaKnown RBP16.45■□□□□ 0.22
SCARB1-207ENST00000541661 WRNIP1Q96S55 665 aa16.45■□□□□ 0.22
SCARB1-207ENST00000541661 TMOD2Q9NZR1 351 aa16.45■□□□□ 0.22
SCARB1-207ENST00000541661 RPAP1Q9BWH6 1393 aaPredicted RBP16.45■□□□□ 0.22
SCARB1-207ENST00000541661 ZNF521Q96K83 1311 aa16.45■□□□□ 0.22
SCARB1-207ENST00000541661 BTBD19C9JJ37 291 aa16.44■□□□□ 0.22
SCARB1-207ENST00000541661 IRF6O14896 467 aa16.44■□□□□ 0.22
SCARB1-207ENST00000541661 GNRH1P01148 92 aa16.44■□□□□ 0.22
SCARB1-207ENST00000541661 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-207ENST00000541661 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
SCARB1-207ENST00000541661 ZKSCAN4Q969J2 545 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-207ENST00000541661 MYH13Q9UKX3 1938 aa16.44■□□□□ 0.22
SCARB1-207ENST00000541661 PTPRCP08575 1304 aa16.44■□□□□ 0.22
SCARB1-207ENST00000541661 ZSWIM8A7E2V4 1837 aa16.43■□□□□ 0.22
SCARB1-207ENST00000541661 IFIT1P09914 478 aaKnown RBP16.43■□□□□ 0.22
SCARB1-207ENST00000541661 PPATQ06203 517 aa16.43■□□□□ 0.22
SCARB1-207ENST00000541661 PUM3Q15397 648 aaKnown RBP16.43■□□□□ 0.22
SCARB1-207ENST00000541661 DCAF15Q66K64 600 aa16.43■□□□□ 0.22
SCARB1-207ENST00000541661 KLHDC4Q8TBB5 520 aa16.43■□□□□ 0.22
SCARB1-207ENST00000541661 USP44Q9H0E7 712 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms