RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 C15orf52Q6ZUT6 534 aaKnown RBP15.11■□□□□ 0.01
COPA-205ENST00000541366 ZNF804AQ7Z570 1209 aa15.11■□□□□ 0.01
COPA-205ENST00000541366 TMEM39BQ9GZU3 492 aa15.11■□□□□ 0.01
COPA-205ENST00000541366 ANKRD18BA2A2Z9 1011 aa15.1■□□□□ 0.01
COPA-205ENST00000541366 TCP10L2B9ZVM9 353 aa15.1■□□□□ 0.01
COPA-205ENST00000541366 PLIN1O60240 522 aa15.1■□□□□ 0.01
COPA-205ENST00000541366 SHISA4Q96DD7 197 aa15.1■□□□□ 0.01
COPA-205ENST00000541366 ZNF594Q96JF6 807 aaPredicted RBP15.1■□□□□ 0.01
COPA-205ENST00000541366 STK31Q9BXU1 1019 aa15.1■□□□□ 0.01
COPA-205ENST00000541366 RBM27Q9P2N5 1060 aaKnown RBP15.1■□□□□ 0.01
COPA-205ENST00000541366 LAMA3Q16787 3333 aa15.09■□□□□ 0.01
COPA-205ENST00000541366 GTF2A2P52657 109 aa15.09■□□□□ 0.01
COPA-205ENST00000541366 FKBP1AP62942 108 aaKnown RBP15.09■□□□□ 0.01
COPA-205ENST00000541366 CALD1Q05682 793 aaKnown RBP15.09■□□□□ 0.01
COPA-205ENST00000541366 MTFR1Q15390 333 aa15.09■□□□□ 0.01
COPA-205ENST00000541366 TTF2Q9UNY4 1162 aaKnown RBP15.09■□□□□ 0.01
COPA-205ENST00000541366 MAP3K9P80192 1104 aa15.08■□□□□ 0
COPA-205ENST00000541366 FOXO4P98177 505 aa15.08■□□□□ 0
COPA-205ENST00000541366 ARHGEF6Q15052 776 aa15.08■□□□□ 0
COPA-205ENST00000541366 GRIK5Q16478 980 aa15.08■□□□□ 0
COPA-205ENST00000541366 DZIP1LQ8IYY4 767 aaKnown RBP15.08■□□□□ 0
COPA-205ENST00000541366 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.08■□□□□ 0
COPA-205ENST00000541366 CHMP3Q9Y3E7 222 aa15.08■□□□□ 0
COPA-205ENST00000541366 BTBD19C9JJ37 291 aa15.07■□□□□ 0
COPA-205ENST00000541366 CTGFP29279 349 aa15.07■□□□□ 0
COPA-205ENST00000541366 LACTBP83111 547 aaPredicted RBP15.07■□□□□ 0
COPA-205ENST00000541366 TNFAIP1Q13829 316 aa15.07■□□□□ 0
COPA-205ENST00000541366 MFSD14BQ5SR56 506 aa15.07■□□□□ 0
COPA-205ENST00000541366 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
COPA-205ENST00000541366 DPF3Q92784 378 aa15.07■□□□□ 0
COPA-205ENST00000541366 TLR2O60603 784 aa15.06■□□□□ 0
COPA-205ENST00000541366 GYG1P46976 350 aa15.06■□□□□ 0
COPA-205ENST00000541366 CACNB3P54284 484 aa15.06■□□□□ 0
COPA-205ENST00000541366 FLIIQ13045 1269 aa15.06■□□□□ 0
COPA-205ENST00000541366 IFIT5Q13325 482 aaKnown RBP15.06■□□□□ 0
COPA-205ENST00000541366 EPHA10Q5JZY3 1008 aa15.06■□□□□ 0
COPA-205ENST00000541366 DNAAF4Q8WXU2 420 aa15.06■□□□□ 0
COPA-205ENST00000541366 CHMP4AQ9BY43 222 aa15.06■□□□□ 0
COPA-205ENST00000541366 MYH16Q9H6N6 1097 aa15.06■□□□□ 0
COPA-205ENST00000541366 CSADQ9Y600 493 aa15.06■□□□□ 0
COPA-205ENST00000541366 SNCAIPQ9Y6H5 919 aa15.06■□□□□ 0
COPA-205ENST00000541366 FAM205AQ6ZU69 1335 aa15.06■□□□□ 0
COPA-205ENST00000541366 SPDYE5A6NIY4 337 aa15.05■□□□□ -0
COPA-205ENST00000541366 FKBP5Q13451 457 aaPredicted RBP15.05■□□□□ -0
COPA-205ENST00000541366 TWISTNBQ3B726 338 aaPredicted RBP15.05■□□□□ -0
COPA-205ENST00000541366 LINS1Q8NG48 757 aa15.05■□□□□ -0
COPA-205ENST00000541366 TDRD7Q8NHU6 1098 aaKnown RBP15.05■□□□□ -0
COPA-205ENST00000541366 ZKSCAN4Q969J2 545 aaPredicted RBP15.05■□□□□ -0
COPA-205ENST00000541366 SERPINA10Q9UK55 444 aa15.05■□□□□ -0
COPA-205ENST00000541366 ARAP2Q8WZ64 1704 aa15.05■□□□□ -0
COPA-205ENST00000541366 DLL1O00548 723 aa15.04■□□□□ -0
COPA-205ENST00000541366 IRF6O14896 467 aa15.04■□□□□ -0
COPA-205ENST00000541366 CRKP46108 304 aa15.04■□□□□ -0
COPA-205ENST00000541366 KIF22Q14807 665 aa15.04■□□□□ -0
COPA-205ENST00000541366 LMBR1LQ6UX01 489 aa15.04■□□□□ -0
COPA-205ENST00000541366 TRIM47Q96LD4 638 aa15.04■□□□□ -0
COPA-205ENST00000541366 CPA4Q9UI42 421 aa15.04■□□□□ -0
COPA-205ENST00000541366 IQSEC3Q9UPP2 1182 aaPredicted RBP15.04■□□□□ -0
COPA-205ENST00000541366 F6X3S4 739 aa15.03■□□□□ -0
COPA-205ENST00000541366 CETPP11597 493 aa15.03■□□□□ -0
COPA-205ENST00000541366 LDHAL6AQ6ZMR3 332 aa15.03■□□□□ -0
COPA-205ENST00000541366 FAM84BQ96KN1 310 aaPredicted RBP15.03■□□□□ -0
COPA-205ENST00000541366 WRNIP1Q96S55 665 aa15.03■□□□□ -0
COPA-205ENST00000541366 CNNM1Q9NRU3 951 aa15.03■□□□□ -0
COPA-205ENST00000541366 PSMC4P43686 418 aa15.02■□□□□ -0
COPA-205ENST00000541366 TNNI2P48788 182 aa15.02■□□□□ -0
COPA-205ENST00000541366 C17orf99Q6UX52 265 aa15.02■□□□□ -0
COPA-205ENST00000541366 UBE2Q1Q7Z7E8 422 aa15.02■□□□□ -0
COPA-205ENST00000541366 ERO1BQ86YB8 467 aa15.02■□□□□ -0
COPA-205ENST00000541366 SLC17A8Q8NDX2 589 aa15.02■□□□□ -0
COPA-205ENST00000541366 PUS3Q9BZE2 481 aaKnown RBP15.02■□□□□ -0
COPA-205ENST00000541366 PRO3102Q9H379 93 aa15.02■□□□□ -0
COPA-205ENST00000541366 SRRDQ9UH36 339 aa15.02■□□□□ -0
COPA-205ENST00000541366 OSBPP22059 807 aa15.01□□□□□ -0.01
COPA-205ENST00000541366 HIBADHP31937 336 aaKnown RBP15.01□□□□□ -0.01
COPA-205ENST00000541366 SNAPC2Q13487 334 aa15.01□□□□□ -0.01
COPA-205ENST00000541366 TAF7LQ5H9L4 462 aa15.01□□□□□ -0.01
COPA-205ENST00000541366 CUL9Q8IWT3 2517 aa15.01□□□□□ -0.01
COPA-205ENST00000541366 SOX1O00570 391 aaPredicted RBP15□□□□□ -0.01
COPA-205ENST00000541366 WDHD1O75717 1129 aaPredicted RBP15□□□□□ -0.01
COPA-205ENST00000541366 CCL5P13501 91 aa15□□□□□ -0.01
COPA-205ENST00000541366 CHAF1AQ13111 956 aaPredicted RBP15□□□□□ -0.01
COPA-205ENST00000541366 CCDC57Q2TAC2 916 aa15□□□□□ -0.01
COPA-205ENST00000541366 GOLGA6L2Q8N9W4 650 aaPredicted RBP15□□□□□ -0.01
COPA-205ENST00000541366 PRKRIP1Q9H875 184 aaPredicted RBP15□□□□□ -0.01
COPA-205ENST00000541366 RIPOR2Q9Y4F9 1068 aa15□□□□□ -0.01
COPA-205ENST00000541366 GNRH1P01148 92 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 INPP5BP32019 993 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 GRK4P32298 578 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 GJA8P48165 433 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 PRMT2P55345 433 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 PPIL2Q13356 520 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 UBE4AQ14139 1066 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 BEND3Q5T5X7 828 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 MIGA2Q7L4E1 593 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 RAET1EQ8TD07 263 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 LRCH3Q96II8 777 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 RNF208Q9H0X6 261 aa14.99□□□□□ -0.01
COPA-205ENST00000541366 ZCCHC17Q9NP64 241 aaKnown RBP14.99□□□□□ -0.01
COPA-205ENST00000541366 BIN2Q9UBW5 565 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms