RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 SYCE3A1L190 88 aa18.1■□□□□ 0.49
CLPTM1-202ENST00000541297 FOXP2O15409 715 aa18.1■□□□□ 0.49
CLPTM1-202ENST00000541297 MAP3K12Q12852 859 aa18.1■□□□□ 0.49
CLPTM1-202ENST00000541297 LRP2BPQ9P2M1 347 aa18.1■□□□□ 0.49
CLPTM1-202ENST00000541297 TCRBV5S4A2TA0A5A2 114 aa18.09■□□□□ 0.49
CLPTM1-202ENST00000541297 RBM17Q96I25 401 aaKnown RBP18.09■□□□□ 0.49
CLPTM1-202ENST00000541297 GPR101Q96P66 508 aaPredicted RBP18.09■□□□□ 0.49
CLPTM1-202ENST00000541297 PSMA5P28066 241 aa18.09■□□□□ 0.49
CLPTM1-202ENST00000541297 UBE3CQ15386 1083 aa18.09■□□□□ 0.49
CLPTM1-202ENST00000541297 BLOC1S2Q6QNY1 142 aa18.09■□□□□ 0.49
CLPTM1-202ENST00000541297 LRSAM1Q6UWE0 723 aa18.09■□□□□ 0.49
CLPTM1-202ENST00000541297 DEFB132Q7Z7B7 95 aa18.08■□□□□ 0.48
CLPTM1-202ENST00000541297 FAM13BQ9NYF5 915 aa18.08■□□□□ 0.48
CLPTM1-202ENST00000541297 JAG2Q9Y219 1238 aa18.08■□□□□ 0.48
CLPTM1-202ENST00000541297 HIBADHP31937 336 aaKnown RBP18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 SLC15A2Q16348 729 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 TSGA10IPQ3SY00 556 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 STOX1Q6ZVD7 989 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 FBXO33Q7Z6M2 555 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 ZKSCAN5Q9Y2L8 839 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 PARP3Q9Y6F1 533 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 NRXN2Q9P2S2 1712 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 HAND2P61296 217 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 FGAP02671 866 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 GPSM2P81274 684 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 AIDAQ96BJ3 306 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 NEK1Q96PY6 1258 aa18.07■□□□□ 0.48
CLPTM1-202ENST00000541297 XDHP47989 1333 aa18.06■□□□□ 0.48
CLPTM1-202ENST00000541297 LARGE1O95461 756 aa18.06■□□□□ 0.48
CLPTM1-202ENST00000541297 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
CLPTM1-202ENST00000541297 KRT32Q14532 448 aa18.06■□□□□ 0.48
CLPTM1-202ENST00000541297 RAI14Q9P0K7 980 aa18.06■□□□□ 0.48
CLPTM1-202ENST00000541297 DENND2AQ9ULE3 1009 aa18.06■□□□□ 0.48
CLPTM1-202ENST00000541297 LIMCH1Q9UPQ0 1083 aa18.06■□□□□ 0.48
CLPTM1-202ENST00000541297 CACNA1SQ13698 1873 aa18.06■□□□□ 0.48
CLPTM1-202ENST00000541297 APPP05067 770 aa18.06■□□□□ 0.48
CLPTM1-202ENST00000541297 CHAF1AQ13111 956 aaPredicted RBP18.06■□□□□ 0.48
CLPTM1-202ENST00000541297 SF3B2Q13435 895 aaKnown RBP18.05■□□□□ 0.48
CLPTM1-202ENST00000541297 CUL4AQ13619 759 aa18.05■□□□□ 0.48
CLPTM1-202ENST00000541297 MIGA1Q8NAN2 632 aa18.05■□□□□ 0.48
CLPTM1-202ENST00000541297 BRIP1Q9BX63 1249 aa18.05■□□□□ 0.48
CLPTM1-202ENST00000541297 STK32BQ9NY57 414 aa18.05■□□□□ 0.48
CLPTM1-202ENST00000541297 UQCRHLA0A096LP55 91 aa18.05■□□□□ 0.48
CLPTM1-202ENST00000541297 DTNBO60941 627 aa18.05■□□□□ 0.48
CLPTM1-202ENST00000541297 MBD4O95243 580 aa18.05■□□□□ 0.48
CLPTM1-202ENST00000541297 UQCRHP07919 91 aa18.05■□□□□ 0.48
CLPTM1-202ENST00000541297 RNF214Q8ND24 703 aa18.05■□□□□ 0.48
CLPTM1-202ENST00000541297 ARMT1Q9H993 441 aa18.05■□□□□ 0.48
CLPTM1-202ENST00000541297 KLRG2A4D1S0 409 aaPredicted RBP18.04■□□□□ 0.48
CLPTM1-202ENST00000541297 HOXA10P31260 410 aaPredicted RBP18.04■□□□□ 0.48
CLPTM1-202ENST00000541297 LRRC2Q9BYS8 371 aa18.04■□□□□ 0.48
CLPTM1-202ENST00000541297 PDGFDQ9GZP0 370 aaPredicted RBP18.04■□□□□ 0.48
CLPTM1-202ENST00000541297 COL11A2P13942 1736 aaPredicted RBP18.04■□□□□ 0.48
CLPTM1-202ENST00000541297 E7EWF7 191 aa18.04■□□□□ 0.48
CLPTM1-202ENST00000541297 UFL1O94874 794 aa18.04■□□□□ 0.48
CLPTM1-202ENST00000541297 ADGRA1Q86SQ6 560 aa18.04■□□□□ 0.48
CLPTM1-202ENST00000541297 LEMD3Q9Y2U8 911 aa18.04■□□□□ 0.48
CLPTM1-202ENST00000541297 IRS2Q9Y4H2 1338 aa18.04■□□□□ 0.48
CLPTM1-202ENST00000541297 STRBPQ96SI9 672 aaKnown RBP18.03■□□□□ 0.48
CLPTM1-202ENST00000541297 BBOX1O75936 387 aa18.03■□□□□ 0.48
CLPTM1-202ENST00000541297 CRAMP1Q96RY5 1269 aa18.03■□□□□ 0.48
CLPTM1-202ENST00000541297 TPCN1Q9ULQ1 816 aa18.03■□□□□ 0.48
CLPTM1-202ENST00000541297 SRGNP10124 158 aa18.02■□□□□ 0.48
CLPTM1-202ENST00000541297 CYP7A1P22680 504 aa18.02■□□□□ 0.48
CLPTM1-202ENST00000541297 IMMTQ16891 758 aaKnown RBP18.02■□□□□ 0.48
CLPTM1-202ENST00000541297 OLFM4Q6UX06 510 aa18.02■□□□□ 0.48
CLPTM1-202ENST00000541297 LCORLQ8N3X6 602 aa18.02■□□□□ 0.48
CLPTM1-202ENST00000541297 CCDC39Q9UFE4 941 aa18.02■□□□□ 0.48
CLPTM1-202ENST00000541297 CTNNA3Q9UI47 895 aa18.02■□□□□ 0.48
CLPTM1-202ENST00000541297 PPEF1O14829 653 aaPredicted RBP18.02■□□□□ 0.48
CLPTM1-202ENST00000541297 BAG6P46379 1132 aa18.02■□□□□ 0.48
CLPTM1-202ENST00000541297 TOB2Q14106 344 aaPredicted RBP18.02■□□□□ 0.48
CLPTM1-202ENST00000541297 MCM5P33992 734 aa18.01■□□□□ 0.47
CLPTM1-202ENST00000541297 ME3Q16798 604 aa18.01■□□□□ 0.47
CLPTM1-202ENST00000541297 CHST3Q7LGC8 479 aa18.01■□□□□ 0.47
CLPTM1-202ENST00000541297 CCDC83Q8IWF9 413 aa18.01■□□□□ 0.47
CLPTM1-202ENST00000541297 GGA1Q9UJY5 639 aa18.01■□□□□ 0.47
CLPTM1-202ENST00000541297 SEMA3EO15041 775 aa18.01■□□□□ 0.47
CLPTM1-202ENST00000541297 PRKAB2O43741 272 aa18.01■□□□□ 0.47
CLPTM1-202ENST00000541297 CSPP1Q1MSJ5 1256 aa18.01■□□□□ 0.47
CLPTM1-202ENST00000541297 Q6ZUG5 572 aa18.01■□□□□ 0.47
CLPTM1-202ENST00000541297 NECAB1Q8N987 351 aa18.01■□□□□ 0.47
CLPTM1-202ENST00000541297 ZNF213O14771 459 aa18■□□□□ 0.47
CLPTM1-202ENST00000541297 MBD3O95983 291 aa18■□□□□ 0.47
CLPTM1-202ENST00000541297 INTS4Q96HW7 963 aaKnown RBP18■□□□□ 0.47
CLPTM1-202ENST00000541297 CCDC88AQ3V6T2 1871 aa18■□□□□ 0.47
CLPTM1-202ENST00000541297 A0A0U1RQG5 324 aaPredicted RBP18■□□□□ 0.47
CLPTM1-202ENST00000541297 BRD1O95696 1058 aa18■□□□□ 0.47
CLPTM1-202ENST00000541297 PRDX5P30044 214 aa18■□□□□ 0.47
CLPTM1-202ENST00000541297 PDE6BP35913 854 aa18■□□□□ 0.47
CLPTM1-202ENST00000541297 ZNF384Q8TF68 577 aa18■□□□□ 0.47
CLPTM1-202ENST00000541297 POLLQ9UGP5 575 aa18■□□□□ 0.47
CLPTM1-202ENST00000541297 C6orf229H3BNL8 230 aa18■□□□□ 0.47
CLPTM1-202ENST00000541297 FGD1P98174 961 aa18■□□□□ 0.47
CLPTM1-202ENST00000541297 NPR1P16066 1061 aa17.99■□□□□ 0.47
CLPTM1-202ENST00000541297 STK3Q13188 491 aa17.99■□□□□ 0.47
CLPTM1-202ENST00000541297 ZNF622Q969S3 477 aaKnown RBP eCLIP17.99■□□□□ 0.472e-7■■■□□ 18
CLPTM1-202ENST00000541297 EPB41L4AQ9HCS5 686 aaPredicted RBP17.99■□□□□ 0.47
CLPTM1-202ENST00000541297 SLC4A4Q9Y6R1 1079 aa17.99■□□□□ 0.47
CLPTM1-202ENST00000541297 LRRC37AA6NMS7 1700 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms