RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 PKDCCQ504Y2 493 aa8.16□□□□□ -1.1
CLTCL1-206ENST00000540896 ZNF697Q5TEC3 545 aa8.16□□□□□ -1.1
CLTCL1-206ENST00000540896 LDHAL6AQ6ZMR3 332 aa8.16□□□□□ -1.1
CLTCL1-206ENST00000540896 CLASRPQ8N2M8 674 aaKnown RBP8.16□□□□□ -1.1
CLTCL1-206ENST00000540896 CDC5LQ99459 802 aaKnown RBP8.16□□□□□ -1.1
CLTCL1-206ENST00000540896 MPHOSPH8Q99549 860 aa8.16□□□□□ -1.1
CLTCL1-206ENST00000540896 FHDC1Q9C0D6 1143 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-206ENST00000540896 CD2APQ9Y5K6 639 aa8.16□□□□□ -1.1
CLTCL1-206ENST00000540896 LRP5O75197 1615 aa8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 LCE2BO14633 110 aa8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 PPEF1O14829 653 aaPredicted RBP8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 IFIT2P09913 472 aaKnown RBP8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 FECHP22830 423 aa8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 IGHMBP2P38935 993 aaKnown RBP8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 TFCP2Q12800 502 aa8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 SF3B3Q15393 1217 aaKnown RBP8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 PUS10Q3MIT2 529 aaKnown RBP8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 TPRNQ4KMQ1 711 aa8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 LRRC24Q50LG9 513 aa8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 LIAT1Q6ZQX7 453 aa8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 DDX46Q7L014 1031 aaKnown RBP8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 GPIHBP1Q8IV16 184 aa8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 C16orf71Q8IYS4 520 aaPredicted RBP8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 RPGRQ92834 1020 aaKnown RBP8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 BRIP1Q9BX63 1249 aa8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 SEC31BQ9NQW1 1179 aa8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 CEP126Q9P2H0 1117 aa8.15□□□□□ -1.1
CLTCL1-206ENST00000540896 NRXN2Q9P2S2 1712 aa8.15□□□□□ -1.11
CLTCL1-206ENST00000540896 A0A0G2JLW4 131 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 GPR37O15354 613 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 CIAO1O76071 339 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 SASH1O94885 1247 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 FMNL1O95466 1100 aaPredicted RBP8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 PDE6BP35913 854 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 GCGRP47871 477 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 METTL24Q5JXM2 366 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 MORN1Q5T089 497 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 ZNF787Q6DD87 383 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 AACSQ86V21 672 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 C2CD5Q86YS7 1000 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 ANKRD18AQ8IVF6 992 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 GPATCH3Q96I76 525 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 NEUROD6Q96NK8 337 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 SYT17Q9BSW7 474 aa8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 PUS3Q9BZE2 481 aaKnown RBP8.14□□□□□ -1.11
CLTCL1-206ENST00000540896 C10orf71Q711Q0 1435 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 ABCC12Q96J65 1359 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 H0YIN7 160 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 CD2BP2O95400 341 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 DPEP1P16444 411 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 CHRNA5P30532 468 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 RPIAP49247 311 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 TGFB2P61812 414 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 RPS8P62241 208 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 GORABQ5T7V8 394 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 TRIM67Q6ZTA4 783 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 ATG9AQ7Z3C6 839 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 NLGN2Q8NFZ4 835 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 OTUD7AQ8TE49 926 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 EMID1Q96A84 441 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 RBM17Q96I25 401 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 AKAP2Q9Y2D5 859 aa8.13□□□□□ -1.11
CLTCL1-206ENST00000540896 RTL9Q8NET4 1388 aa8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 MROH5Q6ZUA9 1318 aa8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 KLRG2A4D1S0 409 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 MX1P20591 662 aa8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 FUT2Q10981 343 aa8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 TNNI3KQ59H18 835 aa8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 PLEKHM2Q8IWE5 1019 aa8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 EAF2Q96CJ1 260 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 CCDC8Q9H0W5 538 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 RIPOR2Q9Y4F9 1068 aa8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 FPGT-TNNI3KV9GXZ4 949 aa8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 KIF13BQ9NQT8 1826 aa8.12□□□□□ -1.11
CLTCL1-206ENST00000540896 ANKRD31Q8N7Z5 1873 aa8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 ERC2O15083 957 aa8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 SRGNP10124 158 aa8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 PDE1AP54750 535 aa8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 TIMM10P62072 90 aa8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 CRY2Q49AN0 593 aa8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 TSHZ3Q63HK5 1081 aa8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 HELBQ8NG08 1087 aaPredicted RBP8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 CELF1Q92879 486 aaKnown RBP8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 ZNF622Q969S3 477 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 MASTLQ96GX5 879 aa8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 TMX4Q9H1E5 349 aaPredicted RBP8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 GPR108Q9NPR9 543 aa8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 ECHDC1Q9NTX5 307 aa8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 BSDC1Q9NW68 430 aaPredicted RBP8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 PIM2Q9P1W9 311 aa8.11□□□□□ -1.11
CLTCL1-206ENST00000540896 GDF9O60383 454 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 TAF5LO75529 589 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 BBOX1O75936 387 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 PDE8BO95263 885 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 NPR1P16066 1061 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 KCNA3P22001 575 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 HOXA10P31260 410 aaPredicted RBP8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 KCNJ4P48050 445 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 GRAPQ13588 217 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 ATP2B3Q16720 1220 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms