RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 C4AP0C0L4 1744 aa24.52■■□□□ 1.52
LSM14A-202ENST00000540746 C4BP0C0L5 1744 aa24.52■■□□□ 1.52
LSM14A-202ENST00000540746 GOLPH3LQ9H4A5 285 aa24.52■■□□□ 1.52
LSM14A-202ENST00000540746 NIP7Q9Y221 180 aaKnown RBP eCLIP24.52■■□□□ 1.52
LSM14A-202ENST00000540746 CICQ96RK0 1608 aaPredicted RBP24.52■■□□□ 1.52
LSM14A-202ENST00000540746 KCNQ2O43526 872 aa24.52■■□□□ 1.52
LSM14A-202ENST00000540746 ANO6Q4KMQ2 910 aa24.52■■□□□ 1.52
LSM14A-202ENST00000540746 PARP10Q53GL7 1025 aa24.52■■□□□ 1.52
LSM14A-202ENST00000540746 LUZP1Q86V48 1076 aa24.52■■□□□ 1.52
LSM14A-202ENST00000540746 NUTM2BA6NNL0 878 aaPredicted RBP24.51■■□□□ 1.51
LSM14A-202ENST00000540746 NUTM2EB1AL46 878 aaPredicted RBP24.51■■□□□ 1.51
LSM14A-202ENST00000540746 NUTM2AQ8IVF1 878 aaPredicted RBP24.51■■□□□ 1.51
LSM14A-202ENST00000540746 GJB4Q9NTQ9 266 aa24.51■■□□□ 1.51
LSM14A-202ENST00000540746 ATL3Q6DD88 541 aa24.5■■□□□ 1.51
LSM14A-202ENST00000540746 AIDAQ96BJ3 306 aa24.5■■□□□ 1.51
LSM14A-202ENST00000540746 ZNF396Q96N95 335 aaPredicted RBP24.5■■□□□ 1.51
LSM14A-202ENST00000540746 LAMB2P55268 1798 aa24.5■■□□□ 1.51
LSM14A-202ENST00000540746 DHX16O60231 1041 aaKnown RBP24.5■■□□□ 1.51
LSM14A-202ENST00000540746 TRDNQ13061 729 aa24.5■■□□□ 1.51
LSM14A-202ENST00000540746 CCDC152Q4G0S7 254 aa24.5■■□□□ 1.51
LSM14A-202ENST00000540746 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.5■■□□□ 1.51
LSM14A-202ENST00000540746 CCAR1Q8IX12 1150 aaKnown RBP24.5■■□□□ 1.51
LSM14A-202ENST00000540746 MAGEB6Q8N7X4 407 aa24.5■■□□□ 1.51
LSM14A-202ENST00000540746 SENP2Q9HC62 589 aa24.5■■□□□ 1.51
LSM14A-202ENST00000540746 EPB41L4AQ9HCS5 686 aaPredicted RBP24.5■■□□□ 1.51
LSM14A-202ENST00000540746 INCENPQ9NQS7 918 aa24.5■■□□□ 1.51
LSM14A-202ENST00000540746 ORC3Q9UBD5 711 aaPredicted RBP24.5■■□□□ 1.51
LSM14A-202ENST00000540746 LTBP4Q8N2S1 1624 aa24.49■■□□□ 1.51
LSM14A-202ENST00000540746 BCAMP50895 628 aa24.49■■□□□ 1.51
LSM14A-202ENST00000540746 FBXO18Q8NFZ0 1043 aa24.49■■□□□ 1.51
LSM14A-202ENST00000540746 CBX8Q9HC52 389 aa24.49■■□□□ 1.51
LSM14A-202ENST00000540746 ANGEL1Q9UNK9 670 aaKnown RBP24.49■■□□□ 1.51
LSM14A-202ENST00000540746 NEDD4P46934 1319 aa24.49■■□□□ 1.51
LSM14A-202ENST00000540746 B4E1Z4 1266 aa24.49■■□□□ 1.51
LSM14A-202ENST00000540746 SNW1Q13573 536 aaKnown RBP24.49■■□□□ 1.51
LSM14A-202ENST00000540746 C8orf76Q96K31 380 aa24.49■■□□□ 1.51
LSM14A-202ENST00000540746 SH2B2O14492 632 aaPredicted RBP24.48■■□□□ 1.51
LSM14A-202ENST00000540746 TTC12Q9H892 705 aaPredicted RBP24.48■■□□□ 1.51
LSM14A-202ENST00000540746 RTL9Q8NET4 1388 aa24.48■■□□□ 1.51
LSM14A-202ENST00000540746 MBD4O95243 580 aa24.47■■□□□ 1.51
LSM14A-202ENST00000540746 ALX1Q15699 326 aa24.47■■□□□ 1.51
LSM14A-202ENST00000540746 TACC3Q9Y6A5 838 aa24.47■■□□□ 1.51
LSM14A-202ENST00000540746 COL5A3P25940 1745 aaPredicted RBP24.47■■□□□ 1.51
LSM14A-202ENST00000540746 CHD4Q14839 1912 aa24.47■■□□□ 1.51
LSM14A-202ENST00000540746 CPLX1O14810 134 aa24.47■■□□□ 1.51
LSM14A-202ENST00000540746 MAP3K12Q12852 859 aa24.47■■□□□ 1.51
LSM14A-202ENST00000540746 BARGINQ6ZT62 677 aa24.47■■□□□ 1.51
LSM14A-202ENST00000540746 ENGASEQ8NFI3 743 aa24.47■■□□□ 1.51
LSM14A-202ENST00000540746 ARMT1Q9H993 441 aa24.47■■□□□ 1.51
LSM14A-202ENST00000540746 IFNL3Q8IZI9 196 aa24.46■■□□□ 1.51
LSM14A-202ENST00000540746 PATL2C9JE40 543 aaKnown RBP24.46■■□□□ 1.51
LSM14A-202ENST00000540746 POLR3DP05423 398 aaPredicted RBP24.46■■□□□ 1.51
LSM14A-202ENST00000540746 RXRAP19793 462 aa24.46■■□□□ 1.51
LSM14A-202ENST00000540746 IGHMBP2P38935 993 aaKnown RBP24.46■■□□□ 1.51
LSM14A-202ENST00000540746 CHRNDQ07001 517 aa24.46■■□□□ 1.51
LSM14A-202ENST00000540746 SASS6Q6UVJ0 657 aa24.46■■□□□ 1.51
LSM14A-202ENST00000540746 IGDCC4Q8TDY8 1250 aa24.46■■□□□ 1.51
LSM14A-202ENST00000540746 RTEL1Q9NZ71 1219 aa24.46■■□□□ 1.51
LSM14A-202ENST00000540746 BCL9LQ86UU0 1499 aa24.45■■□□□ 1.51
LSM14A-202ENST00000540746 ZMYM6O95789 1325 aa24.45■■□□□ 1.51
LSM14A-202ENST00000540746 TAF1P21675 1872 aa24.45■■□□□ 1.5
LSM14A-202ENST00000540746 ME1P48163 572 aa24.45■■□□□ 1.5
LSM14A-202ENST00000540746 DNAJC25Q9H1X3 360 aa24.45■■□□□ 1.5
LSM14A-202ENST00000540746 BCORQ6W2J9 1755 aa24.45■■□□□ 1.5
LSM14A-202ENST00000540746 GSG1L2A8MUP6 293 aa24.44■■□□□ 1.5
LSM14A-202ENST00000540746 KIF28PB7ZC32 967 aa24.44■■□□□ 1.5
LSM14A-202ENST00000540746 APOA5Q6Q788 366 aa24.44■■□□□ 1.5
LSM14A-202ENST00000540746 PCDHA7Q9UN72 937 aa24.44■■□□□ 1.5
LSM14A-202ENST00000540746 PRKAB2O43741 272 aa24.44■■□□□ 1.5
LSM14A-202ENST00000540746 CTDSPL2Q05D32 466 aa24.44■■□□□ 1.5
LSM14A-202ENST00000540746 KIAA2012Q0VF49 1180 aa24.44■■□□□ 1.5
LSM14A-202ENST00000540746 AIFM3Q96NN9 605 aa24.44■■□□□ 1.5
LSM14A-202ENST00000540746 CLIC4Q9Y696 253 aa24.44■■□□□ 1.5
LSM14A-202ENST00000540746 CDC27P30260 824 aa24.43■■□□□ 1.5
LSM14A-202ENST00000540746 C3orf67Q6ZVT6 689 aa24.43■■□□□ 1.5
LSM14A-202ENST00000540746 WTIPA6NIX2 430 aaPredicted RBP24.43■■□□□ 1.5
LSM14A-202ENST00000540746 ZNF165P49910 485 aa24.43■■□□□ 1.5
LSM14A-202ENST00000540746 METAP2P50579 478 aaKnown RBP eCLIP24.43■■□□□ 1.5
LSM14A-202ENST00000540746 FAM160A1Q05DH4 1040 aa24.43■■□□□ 1.5
LSM14A-202ENST00000540746 LINC00301Q8NCQ3 95 aa24.43■■□□□ 1.5
LSM14A-202ENST00000540746 LY9Q9HBG7 655 aa24.43■■□□□ 1.5
LSM14A-202ENST00000540746 KCNQ4P56696 695 aa24.42■■□□□ 1.5
LSM14A-202ENST00000540746 CCDC73Q6ZRK6 1079 aa24.42■■□□□ 1.5
LSM14A-202ENST00000540746 LCORLQ8N3X6 602 aa24.42■■□□□ 1.5
LSM14A-202ENST00000540746 FSIP1Q8NA03 581 aa24.42■■□□□ 1.5
LSM14A-202ENST00000540746 LINC00116Q8NCU8 138 aa24.42■■□□□ 1.5
LSM14A-202ENST00000540746 NAPBQ9H115 298 aa24.42■■□□□ 1.5
LSM14A-202ENST00000540746 SMARCC1Q92922 1105 aaPredicted RBP24.42■■□□□ 1.5
LSM14A-202ENST00000540746 TMEM87BQ96K49 555 aa24.42■■□□□ 1.5
LSM14A-202ENST00000540746 ZSWIM5Q9P217 1185 aa24.42■■□□□ 1.5
LSM14A-202ENST00000540746 R3HCC1Q9Y3T6 440 aaKnown RBP24.42■■□□□ 1.5
LSM14A-202ENST00000540746 KIF23Q02241 960 aaPredicted RBP24.41■■□□□ 1.5
LSM14A-202ENST00000540746 MYSM1Q5VVJ2 828 aa24.41■■□□□ 1.5
LSM14A-202ENST00000540746 MICU3Q86XE3 530 aa24.41■■□□□ 1.5
LSM14A-202ENST00000540746 SPC24Q8NBT2 197 aa24.41■■□□□ 1.5
LSM14A-202ENST00000540746 TDRD7Q8NHU6 1098 aaKnown RBP24.41■■□□□ 1.5
LSM14A-202ENST00000540746 IQSEC3Q9UPP2 1182 aaPredicted RBP24.41■■□□□ 1.5
LSM14A-202ENST00000540746 ECM29Q5VYK3 1845 aa24.41■■□□□ 1.5
LSM14A-202ENST00000540746 CASZ1Q86V15 1759 aa24.41■■□□□ 1.5
LSM14A-202ENST00000540746 ERFEQ4G0M1 354 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms