RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 IFIT5Q13325 482 aaKnown RBP14.86□□□□□ -0.03
MSH6-210ENST00000540021 SMC1AQ14683 1233 aaKnown RBP14.86□□□□□ -0.03
MSH6-210ENST00000540021 ATL3Q6DD88 541 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 HELLSQ9NRZ9 838 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 KCNH3Q9ULD8 1083 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 CARMIL3Q8ND23 1372 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 PNMA6AP0CW24 399 aaPredicted RBP14.86□□□□□ -0.03
MSH6-210ENST00000540021 LRRC24Q50LG9 513 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 SARM1Q6SZW1 724 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 LDHAL6AQ6ZMR3 332 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 LINC00301Q8NCQ3 95 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 CABLES1Q8TDN4 633 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 RSPH14Q9UHP6 348 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 VPS37DQ86XT2 251 aa14.85□□□□□ -0.03
MSH6-210ENST00000540021 HAUS7Q99871 368 aa14.85□□□□□ -0.03
MSH6-210ENST00000540021 STRN4Q9NRL3 753 aa14.85□□□□□ -0.03
MSH6-210ENST00000540021 POLR2DO15514 142 aaKnown RBP14.85□□□□□ -0.03
MSH6-210ENST00000540021 XBP1P17861 261 aa14.85□□□□□ -0.03
MSH6-210ENST00000540021 CCDC175P0C221 793 aa14.85□□□□□ -0.03
MSH6-210ENST00000540021 HNRNPH2P55795 449 aaKnown RBP14.85□□□□□ -0.03
MSH6-210ENST00000540021 E4F1Q66K89 784 aaPredicted RBP14.85□□□□□ -0.03
MSH6-210ENST00000540021 KRT40Q6A162 431 aa14.85□□□□□ -0.03
MSH6-210ENST00000540021 ARMCX5Q6P1M9 558 aa14.85□□□□□ -0.03
MSH6-210ENST00000540021 PROSER2Q86WR7 435 aaPredicted RBP14.85□□□□□ -0.03
MSH6-210ENST00000540021 UBAC1Q9BSL1 405 aa14.85□□□□□ -0.03
MSH6-210ENST00000540021 AKAP2Q9Y2D5 859 aa14.85□□□□□ -0.03
MSH6-210ENST00000540021 NEURL4Q96JN8 1562 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 PTPN12Q05209 780 aaKnown RBP14.84□□□□□ -0.03
MSH6-210ENST00000540021 CCDC70Q6NSX1 233 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 IFNL2Q8IZJ0 200 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 STAMQ92783 540 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 PPP2R2CQ9Y2T4 447 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 KNDC1Q76NI1 1749 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 NEO1Q92859 1461 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 GOLGA6L9A6NEM1 432 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 CMTR1Q8N1G2 835 aaKnown RBP14.84□□□□□ -0.03
MSH6-210ENST00000540021 FBXO18Q8NFZ0 1043 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 SIRT1Q96EB6 747 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 ORAI2Q96SN7 254 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 SLFN14P0C7P3 912 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 CCT6AP40227 531 aaKnown RBP14.84□□□□□ -0.03
MSH6-210ENST00000540021 TOM1L2Q6ZVM7 507 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 HELBQ8NG08 1087 aaPredicted RBP14.84□□□□□ -0.03
MSH6-210ENST00000540021 ABCF2Q9UG63 623 aa14.84□□□□□ -0.03
MSH6-210ENST00000540021 TMEM232C9JQI7 657 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 N4BP3O15049 544 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 COBLO75128 1261 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 YEATS4O95619 227 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 EVA1CP58658 441 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 RUFY1Q96T51 708 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 RTEL1Q9NZ71 1219 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 KCNJ14Q9UNX9 436 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 ARHGAP6O43182 974 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 PI16Q6UXB8 463 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 KIF6Q6ZMV9 814 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 LRRN4CLQ8ND94 238 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 NOC3LQ8WTT2 800 aaKnown RBP14.83□□□□□ -0.04
MSH6-210ENST00000540021 GDAP1L1Q96MZ0 367 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 KAT6BQ8WYB5 2073 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 PSDA5PKW4 1024 aaPredicted RBP14.83□□□□□ -0.04
MSH6-210ENST00000540021 WDHD1O75717 1129 aaPredicted RBP14.83□□□□□ -0.04
MSH6-210ENST00000540021 PUS3Q9BZE2 481 aaKnown RBP14.83□□□□□ -0.04
MSH6-210ENST00000540021 PCDHA5Q9Y5H7 936 aa14.83□□□□□ -0.04
MSH6-210ENST00000540021 GPAA1O43292 621 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 FGAP02671 866 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 FMR1NBQ8N0W7 255 aaPredicted RBP14.82□□□□□ -0.04
MSH6-210ENST00000540021 ZNF274Q96GC6 653 aaPredicted RBP14.82□□□□□ -0.04
MSH6-210ENST00000540021 BRMS1Q9HCU9 246 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 MAST3O60307 1309 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 ZAP70P43403 619 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 DNA2P51530 1060 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 RBM6P78332 1123 aaKnown RBP14.82□□□□□ -0.04
MSH6-210ENST00000540021 ZSCAN26Q16670 478 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 KIAA1328Q86T90 577 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 FAM89AQ96GI7 184 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 RABEP2Q9H5N1 569 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 COPRSQ9NQ92 184 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 IQSEC3Q9UPP2 1182 aaPredicted RBP14.82□□□□□ -0.04
MSH6-210ENST00000540021 A1BGP04217 495 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 CHMP4BP1P59074 171 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 KRT28Q7Z3Y7 464 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 GRAMD1CQ8IYS0 662 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 DSCC1Q9BVC3 393 aa14.82□□□□□ -0.04
MSH6-210ENST00000540021 KIF20BQ96Q89 1820 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 EYA2O00167 538 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 KRI1Q8N9T8 703 aaKnown RBP14.81□□□□□ -0.04
MSH6-210ENST00000540021 DPF2Q92785 391 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 CAPZA3Q96KX2 299 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 MAPK8IP1Q9UQF2 711 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 hCG_1642624A0A1W2PR95 340 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 M0R2C6 588 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 MATR3P43243 847 aaKnown RBP eCLIP14.81□□□□□ -0.04
MSH6-210ENST00000540021 IGSF22Q8N9C0 903 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 WASF1Q92558 559 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 HINFPQ9BQA5 517 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 CRACR2AQ9BSW2 395 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 NACAP1Q9BZK3 213 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 LRP2BPQ9P2M1 347 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 GUCA1BQ9UMX6 200 aa14.81□□□□□ -0.04
MSH6-210ENST00000540021 FRMPD1Q5SYB0 1578 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms