RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 TCF12Q99081 682 aa8.46□□□□□ -1.06
MRE11-209ENST00000540013 SOX13Q9UN79 622 aa8.46□□□□□ -1.06
MRE11-209ENST00000540013 A0A096LPE4 126 aa8.45□□□□□ -1.06
MRE11-209ENST00000540013 A0A1W2PPZ6 126 aa8.45□□□□□ -1.06
MRE11-209ENST00000540013 TRPA1O75762 1119 aa8.45□□□□□ -1.06
MRE11-209ENST00000540013 GRM2Q14416 872 aa8.45□□□□□ -1.06
MRE11-209ENST00000540013 NOL8Q76FK4 1167 aaKnown RBP8.45□□□□□ -1.06
MRE11-209ENST00000540013 FBXO11Q86XK2 927 aa8.45□□□□□ -1.06
MRE11-209ENST00000540013 FMR1NBQ8N0W7 255 aaPredicted RBP8.45□□□□□ -1.06
MRE11-209ENST00000540013 KLHL23Q8NBE8 558 aa8.45□□□□□ -1.06
MRE11-209ENST00000540013 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
MRE11-209ENST00000540013 HHIPQ96QV1 700 aa8.45□□□□□ -1.06
MRE11-209ENST00000540013 CUX1P39880 1505 aa8.44□□□□□ -1.06
MRE11-209ENST00000540013 APBA3O96018 575 aa8.44□□□□□ -1.06
MRE11-209ENST00000540013 ITPKAP23677 461 aa8.44□□□□□ -1.06
MRE11-209ENST00000540013 GNA15P30679 374 aa8.44□□□□□ -1.06
MRE11-209ENST00000540013 IKBKEQ14164 716 aa8.44□□□□□ -1.06
MRE11-209ENST00000540013 DPH6Q7L8W6 267 aa8.44□□□□□ -1.06
MRE11-209ENST00000540013 PSMD1Q99460 953 aa8.44□□□□□ -1.06
MRE11-209ENST00000540013 BCO2Q9BYV7 579 aa8.44□□□□□ -1.06
MRE11-209ENST00000540013 CLEC4MQ9H2X3 399 aaPredicted RBP8.44□□□□□ -1.06
MRE11-209ENST00000540013 OSGEPQ9NPF4 335 aa8.44□□□□□ -1.06
MRE11-209ENST00000540013 FGD5Q6ZNL6 1462 aa8.44□□□□□ -1.06
MRE11-209ENST00000540013 TMEM238LA0A1B0GVL6 79 aa8.43□□□□□ -1.06
MRE11-209ENST00000540013 LINC01387J3KSC0 135 aa8.43□□□□□ -1.06
MRE11-209ENST00000540013 ADAM23O75077 832 aa8.43□□□□□ -1.06
MRE11-209ENST00000540013 EPHA1P21709 976 aa8.43□□□□□ -1.06
MRE11-209ENST00000540013 GSTT1P30711 240 aa8.43□□□□□ -1.06
MRE11-209ENST00000540013 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
MRE11-209ENST00000540013 RPS26P11Q5JNZ5 115 aaPredicted RBP8.43□□□□□ -1.06
MRE11-209ENST00000540013 FBXO33Q7Z6M2 555 aa8.43□□□□□ -1.06
MRE11-209ENST00000540013 NOP9Q86U38 636 aaKnown RBP8.43□□□□□ -1.06
MRE11-209ENST00000540013 SOX17Q9H6I2 414 aaPredicted RBP8.43□□□□□ -1.06
MRE11-209ENST00000540013 ABCB6Q9NP58 842 aa8.43□□□□□ -1.06
MRE11-209ENST00000540013 SEC31BQ9NQW1 1179 aa8.43□□□□□ -1.06
MRE11-209ENST00000540013 SH2B1Q9NRF2 756 aaPredicted RBP8.43□□□□□ -1.06
MRE11-209ENST00000540013 WWC3Q9ULE0 1092 aa8.43□□□□□ -1.06
MRE11-209ENST00000540013 SOGA1O94964 1423 aa8.43□□□□□ -1.06
MRE11-209ENST00000540013 AQRO60306 1485 aaKnown RBP eCLIP8.43□□□□□ -1.06
MRE11-209ENST00000540013 RAD54L2Q9Y4B4 1467 aa8.43□□□□□ -1.06
MRE11-209ENST00000540013 FSCN2O14926 492 aa8.42□□□□□ -1.06
MRE11-209ENST00000540013 COL8A1P27658 744 aa8.42□□□□□ -1.06
MRE11-209ENST00000540013 GRIA4P48058 902 aa8.42□□□□□ -1.06
MRE11-209ENST00000540013 SETDB1Q15047 1291 aa8.42□□□□□ -1.06
MRE11-209ENST00000540013 DTHD1Q6ZMT9 781 aa8.42□□□□□ -1.06
MRE11-209ENST00000540013 C12orf49Q9H741 205 aa8.42□□□□□ -1.06
MRE11-209ENST00000540013 FAM8A1Q9UBU6 413 aa8.42□□□□□ -1.06
MRE11-209ENST00000540013 WDR97A6NE52 1622 aa8.42□□□□□ -1.06
MRE11-209ENST00000540013 CHD1O14646 1710 aa8.42□□□□□ -1.06
MRE11-209ENST00000540013 C9orf172C9J069 976 aa8.41□□□□□ -1.06
MRE11-209ENST00000540013 MARCH6O60337 910 aa8.41□□□□□ -1.06
MRE11-209ENST00000540013 EIF4BP23588 611 aaKnown RBP8.41□□□□□ -1.06
MRE11-209ENST00000540013 ERCC5P28715 1186 aaPredicted RBP8.41□□□□□ -1.06
MRE11-209ENST00000540013 NRG1Q02297 640 aaPredicted RBP8.41□□□□□ -1.06
MRE11-209ENST00000540013 IGF2-ASQ6U949 168 aa8.41□□□□□ -1.06
MRE11-209ENST00000540013 PI16Q6UXB8 463 aa8.41□□□□□ -1.06
MRE11-209ENST00000540013 VN1R5Q7Z5H4 357 aa8.41□□□□□ -1.06
MRE11-209ENST00000540013 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
MRE11-209ENST00000540013 METTL12A8MUP2 240 aa8.4□□□□□ -1.06
MRE11-209ENST00000540013 FCGRTP55899 365 aa8.4□□□□□ -1.06
MRE11-209ENST00000540013 PCDH1Q08174 1060 aa8.4□□□□□ -1.06
MRE11-209ENST00000540013 C19orf57Q0VDD7 668 aa8.4□□□□□ -1.06
MRE11-209ENST00000540013 NXPE4Q6UWF7 544 aa8.4□□□□□ -1.06
MRE11-209ENST00000540013 GLIS3Q8NEA6 775 aa8.4□□□□□ -1.06
MRE11-209ENST00000540013 DCAF5Q96JK2 942 aa8.4□□□□□ -1.06
MRE11-209ENST00000540013 ZNF576Q9H609 170 aa8.4□□□□□ -1.06
MRE11-209ENST00000540013 MRS2Q9HD23 443 aa8.4□□□□□ -1.06
MRE11-209ENST00000540013 PPM1HQ9ULR3 514 aa8.4□□□□□ -1.06
MRE11-209ENST00000540013 TDRD9Q8NDG6 1382 aaKnown RBP8.39□□□□□ -1.07
MRE11-209ENST00000540013 FAM229AH3BQW9 127 aa8.39□□□□□ -1.07
MRE11-209ENST00000540013 DLL1O00548 723 aa8.39□□□□□ -1.07
MRE11-209ENST00000540013 DEAF1O75398 565 aaPredicted RBP8.39□□□□□ -1.07
MRE11-209ENST00000540013 ESRRAP11474 423 aaPredicted RBP8.39□□□□□ -1.07
MRE11-209ENST00000540013 CDC25BP30305 580 aa8.39□□□□□ -1.07
MRE11-209ENST00000540013 CD68P34810 354 aaPredicted RBP8.39□□□□□ -1.07
MRE11-209ENST00000540013 PSMD2Q13200 908 aa8.39□□□□□ -1.07
MRE11-209ENST00000540013 SPRED3Q2MJR0 410 aa8.39□□□□□ -1.07
MRE11-209ENST00000540013 ZNF662Q6ZS27 426 aa8.39□□□□□ -1.07
MRE11-209ENST00000540013 SETDB2Q96T68 719 aa8.39□□□□□ -1.07
MRE11-209ENST00000540013 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
MRE11-209ENST00000540013 PARP2Q9UGN5 583 aa8.39□□□□□ -1.07
MRE11-209ENST00000540013 TMA7Q9Y2S6 64 aaKnown RBP8.39□□□□□ -1.07
MRE11-209ENST00000540013 AK5Q9Y6K8 562 aa8.39□□□□□ -1.07
MRE11-209ENST00000540013 DAB2P98082 770 aa8.38□□□□□ -1.07
MRE11-209ENST00000540013 TSNAXIP1Q2TAA8 658 aa8.38□□□□□ -1.07
MRE11-209ENST00000540013 TXNDC11Q6PKC3 985 aa8.38□□□□□ -1.07
MRE11-209ENST00000540013 ADAMTSL4Q6UY14 1074 aa8.38□□□□□ -1.07
MRE11-209ENST00000540013 TMC4Q7Z404 712 aa8.38□□□□□ -1.07
MRE11-209ENST00000540013 SLC7A3Q8WY07 619 aa8.38□□□□□ -1.07
MRE11-209ENST00000540013 LENG1Q96BZ8 264 aaPredicted RBP8.38□□□□□ -1.07
MRE11-209ENST00000540013 RIMBP3CA6NJZ7 1639 aa8.37□□□□□ -1.07
MRE11-209ENST00000540013 RIMBP3BA6NNM3 1639 aa8.37□□□□□ -1.07
MRE11-209ENST00000540013 RIMBP3Q9UFD9 1639 aa8.37□□□□□ -1.07
MRE11-209ENST00000540013 B3GALT4O96024 378 aa8.37□□□□□ -1.07
MRE11-209ENST00000540013 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
MRE11-209ENST00000540013 PPP2R3AQ06190 1150 aa8.37□□□□□ -1.07
MRE11-209ENST00000540013 HP1BP3Q5SSJ5 553 aaPredicted RBP8.37□□□□□ -1.07
MRE11-209ENST00000540013 ANKRD24Q8TF21 1146 aa8.37□□□□□ -1.07
MRE11-209ENST00000540013 OSBPL7Q9BZF2 842 aa8.37□□□□□ -1.07
MRE11-209ENST00000540013 CEP44Q9C0F1 390 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms