RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 LDHAL6AQ6ZMR3 332 aa8.04□□□□□ -1.12
SNHG1-212ENST00000539975 MPNDQ8N594 471 aa8.04□□□□□ -1.12
SNHG1-212ENST00000539975 SUCLG2Q96I99 432 aa8.04□□□□□ -1.12
SNHG1-212ENST00000539975 MEIS3Q99687 375 aa8.04□□□□□ -1.12
SNHG1-212ENST00000539975 TBC1D2Q9BYX2 928 aa8.04□□□□□ -1.12
SNHG1-212ENST00000539975 ANKRD2Q9GZV1 360 aa8.04□□□□□ -1.12
SNHG1-212ENST00000539975 TAOK3Q9H2K8 898 aa8.04□□□□□ -1.12
SNHG1-212ENST00000539975 BICC1Q9H694 974 aaKnown RBP8.04□□□□□ -1.12
SNHG1-212ENST00000539975 GREM2Q9H772 168 aa8.04□□□□□ -1.12
SNHG1-212ENST00000539975 COG6Q9Y2V7 657 aa8.04□□□□□ -1.12
SNHG1-212ENST00000539975 ATP6V0A2Q9Y487 856 aa8.04□□□□□ -1.12
SNHG1-212ENST00000539975 LRRFIP2Q9Y608 721 aaKnown RBP8.04□□□□□ -1.12
SNHG1-212ENST00000539975 C6orf229H3BNL8 230 aa8.03□□□□□ -1.12
SNHG1-212ENST00000539975 SRGAP3O43295 1099 aa8.03□□□□□ -1.12
SNHG1-212ENST00000539975 FDX1P10109 184 aa8.03□□□□□ -1.12
SNHG1-212ENST00000539975 CASP7P55210 303 aa8.03□□□□□ -1.12
SNHG1-212ENST00000539975 FOXO4P98177 505 aa8.03□□□□□ -1.12
SNHG1-212ENST00000539975 MSS51Q4VC12 460 aa8.03□□□□□ -1.12
SNHG1-212ENST00000539975 JDP2Q8WYK2 163 aa8.03□□□□□ -1.12
SNHG1-212ENST00000539975 EYA3Q99504 573 aa8.03□□□□□ -1.12
SNHG1-212ENST00000539975 ZC3H12CQ9C0D7 883 aaKnown RBP8.03□□□□□ -1.12
SNHG1-212ENST00000539975 SEC31BQ9NQW1 1179 aa8.03□□□□□ -1.12
SNHG1-212ENST00000539975 BSDC1Q9NW68 430 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-212ENST00000539975 SUPT16HQ9Y5B9 1047 aaKnown RBP8.03□□□□□ -1.12
SNHG1-212ENST00000539975 NUP98P52948 1817 aa8.03□□□□□ -1.12
SNHG1-212ENST00000539975 ARFGEF2Q9Y6D5 1785 aa8.02□□□□□ -1.13
SNHG1-212ENST00000539975 RTL9Q8NET4 1388 aa8.02□□□□□ -1.13
SNHG1-212ENST00000539975 ZBTB7BO15156 539 aaPredicted RBP8.02□□□□□ -1.13
SNHG1-212ENST00000539975 NEFLP07196 543 aa8.02□□□□□ -1.13
SNHG1-212ENST00000539975 YBX3P16989 372 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNHG1-212ENST00000539975 LMNB1P20700 586 aa8.02□□□□□ -1.13
SNHG1-212ENST00000539975 FKBP4Q02790 459 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNHG1-212ENST00000539975 OS9Q13438 667 aaPredicted RBP8.02□□□□□ -1.13
SNHG1-212ENST00000539975 AAMPQ13685 434 aa8.02□□□□□ -1.13
SNHG1-212ENST00000539975 ANKLE1Q8NAG6 615 aa8.02□□□□□ -1.13
SNHG1-212ENST00000539975 CELF1Q92879 486 aaKnown RBP8.02□□□□□ -1.13
SNHG1-212ENST00000539975 DDRGK1Q96HY6 314 aa8.02□□□□□ -1.13
SNHG1-212ENST00000539975 USB1Q9BQ65 265 aaKnown RBP8.02□□□□□ -1.13
SNHG1-212ENST00000539975 VPS33BQ9H267 617 aa8.02□□□□□ -1.13
SNHG1-212ENST00000539975 KDM4CQ9H3R0 1056 aa8.02□□□□□ -1.13
SNHG1-212ENST00000539975 GGA1Q9UJY5 639 aa8.02□□□□□ -1.13
SNHG1-212ENST00000539975 COL24A1Q17RW2 1714 aa8.01□□□□□ -1.13
SNHG1-212ENST00000539975 CACNA1FO60840 1977 aa8.01□□□□□ -1.13
SNHG1-212ENST00000539975 RLBP1P12271 317 aa8.01□□□□□ -1.13
SNHG1-212ENST00000539975 ATP2B4P23634 1241 aa8.01□□□□□ -1.13
SNHG1-212ENST00000539975 G3BP1Q13283 466 aaKnown RBP eCLIP8.01□□□□□ -1.13
SNHG1-212ENST00000539975 WASHC4Q2M389 1173 aa8.01□□□□□ -1.13
SNHG1-212ENST00000539975 RABL6Q3YEC7 729 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-212ENST00000539975 HSP90AB4PQ58FF6 505 aa8.01□□□□□ -1.13
SNHG1-212ENST00000539975 METTL24Q5JXM2 366 aa8.01□□□□□ -1.13
SNHG1-212ENST00000539975 RPAP2Q8IXW5 612 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-212ENST00000539975 FAM160A2Q8N612 972 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-212ENST00000539975 PSMD1Q99460 953 aa8.01□□□□□ -1.13
SNHG1-212ENST00000539975 TNNQ9UQP3 1299 aa8.01□□□□□ -1.13
SNHG1-212ENST00000539975 XDHP47989 1333 aa8.01□□□□□ -1.13
SNHG1-212ENST00000539975 MROH5Q6ZUA9 1318 aa8.01□□□□□ -1.13
SNHG1-212ENST00000539975 NRXN2Q9P2S2 1712 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 ANKRD36CQ5JPF3 1778 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 MOXD2PA6NHM9 499 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 SPDYE5A6NIY4 337 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 RNF223E7ERA6 249 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 SPTLC1O15269 473 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 PPIP5K2O43314 1243 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 UFL1O94874 794 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 S1PR4O95977 384 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 IL15P40933 162 aaPredicted RBP8□□□□□ -1.13
SNHG1-212ENST00000539975 EPHA10Q5JZY3 1008 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 RNF19BQ6ZMZ0 732 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 VPS37DQ86XT2 251 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 NIM1KQ8IY84 436 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 LARGE2Q8N3Y3 721 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 RNF181Q9P0P0 153 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 CEP126Q9P2H0 1117 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 MINPP1Q9UNW1 487 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 LEMD3Q9Y2U8 911 aa8□□□□□ -1.13
SNHG1-212ENST00000539975 V9GY48 417 aaPredicted RBP8□□□□□ -1.13
SNHG1-212ENST00000539975 EYA2O00167 538 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 FRAT2O75474 233 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-212ENST00000539975 SURF6O75683 361 aaKnown RBP7.99□□□□□ -1.13
SNHG1-212ENST00000539975 IARSP41252 1262 aaKnown RBP7.99□□□□□ -1.13
SNHG1-212ENST00000539975 EIF6P56537 245 aaKnown RBP7.99□□□□□ -1.13
SNHG1-212ENST00000539975 GPSM2P81274 684 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 ATP8B2P98198 1209 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 CHRNDQ07001 517 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 MTX1Q13505 466 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 TUSC1Q2TAM9 212 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 CAVIN4Q5BKX8 364 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 C20orf194Q5TEA3 1177 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 C9orf131Q5VYM1 1079 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 RSBN1LQ6PCB5 846 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-212ENST00000539975 RETREG3Q86VR2 466 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 ERC1Q8IUD2 1116 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 ANKRD44Q8N8A2 993 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 C7orf43Q8WVR3 580 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 HLA-CQ95604 372 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 KAZALD1Q96I82 304 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 ZNF594Q96JF6 807 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-212ENST00000539975 SIL1Q9H173 461 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 C1orf115Q9H7X2 142 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 ZNF277Q9NRM2 450 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms