RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 BRI3BPQ8WY22 251 aa17.76■□□□□ 0.43
SMARCA4-206ENST00000538456 MS4A4AQ96JQ5 239 aa17.76■□□□□ 0.43
SMARCA4-206ENST00000538456 TEPSINQ96N21 525 aa17.76■□□□□ 0.43
SMARCA4-206ENST00000538456 SERPINA10Q9UK55 444 aa17.76■□□□□ 0.43
SMARCA4-206ENST00000538456 CCL15-CCL14A0A0B4J2E2 113 aa17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 MYCP01106 439 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 HIBADHP31937 336 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 EXOSC9Q06265 439 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 CCL15Q16663 113 aa17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 SLC9C1Q4G0N8 1177 aa17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 TDRD7Q8NHU6 1098 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 OTUD5Q96G74 571 aa17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 PTCH2Q9Y6C5 1203 aa17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 CEP290O15078 2479 aa17.75■□□□□ 0.43
SMARCA4-206ENST00000538456 CRKP46108 304 aa17.74■□□□□ 0.43
SMARCA4-206ENST00000538456 ZNF333Q96JL9 665 aa17.74■□□□□ 0.43
SMARCA4-206ENST00000538456 FAM84BQ96KN1 310 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-206ENST00000538456 ZFYVE28Q9HCC9 887 aa17.74■□□□□ 0.43
SMARCA4-206ENST00000538456 C9orf78Q9NZ63 289 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-206ENST00000538456 IQSEC3Q9UPP2 1182 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-206ENST00000538456 CSADQ9Y600 493 aa17.74■□□□□ 0.43
SMARCA4-206ENST00000538456 TNNI2P48788 182 aa17.73■□□□□ 0.43
SMARCA4-206ENST00000538456 GTF2A2P52657 109 aa17.73■□□□□ 0.43
SMARCA4-206ENST00000538456 SLC4A10Q6U841 1118 aa17.73■□□□□ 0.43
SMARCA4-206ENST00000538456 FAM43AQ8N2R8 423 aa17.73■□□□□ 0.43
SMARCA4-206ENST00000538456 PUS3Q9BZE2 481 aaKnown RBP17.73■□□□□ 0.43
SMARCA4-206ENST00000538456 CACNB3P54284 484 aa17.72■□□□□ 0.43
SMARCA4-206ENST00000538456 MAP3K9P80192 1104 aa17.72■□□□□ 0.43
SMARCA4-206ENST00000538456 CHAF1AQ13111 956 aaPredicted RBP17.72■□□□□ 0.43
SMARCA4-206ENST00000538456 UBE4AQ14139 1066 aa17.72■□□□□ 0.43
SMARCA4-206ENST00000538456 GRIK5Q16478 980 aa17.72■□□□□ 0.43
SMARCA4-206ENST00000538456 SLC4A8Q2Y0W8 1093 aa17.72■□□□□ 0.43
SMARCA4-206ENST00000538456 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMARCA4-206ENST00000538456 ARHGEF6Q15052 776 aa17.71■□□□□ 0.43
SMARCA4-206ENST00000538456 NBPF11Q86T75 865 aa17.71■□□□□ 0.43
SMARCA4-206ENST00000538456 VPS37DQ86XT2 251 aa17.71■□□□□ 0.43
SMARCA4-206ENST00000538456 ECM2O94769 699 aaPredicted RBP17.7■□□□□ 0.42
SMARCA4-206ENST00000538456 SUCLG2Q96I99 432 aa17.7■□□□□ 0.42
SMARCA4-206ENST00000538456 ARHGAP39Q9C0H5 1083 aa17.7■□□□□ 0.42
SMARCA4-206ENST00000538456 SPDYE5A6NIY4 337 aa17.69■□□□□ 0.42
SMARCA4-206ENST00000538456 FRAT2O75474 233 aaPredicted RBP17.69■□□□□ 0.42
SMARCA4-206ENST00000538456 FXR1P51114 621 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMARCA4-206ENST00000538456 SH3TC2Q8TF17 1288 aa17.69■□□□□ 0.42
SMARCA4-206ENST00000538456 WRNIP1Q96S55 665 aa17.69■□□□□ 0.42
SMARCA4-206ENST00000538456 SRCIN1Q9C0H9 1055 aa17.69■□□□□ 0.42
SMARCA4-206ENST00000538456 SNCAIPQ9Y6H5 919 aa17.69■□□□□ 0.42
SMARCA4-206ENST00000538456 TRIOBPQ9H2D6 2365 aa17.69■□□□□ 0.42
SMARCA4-206ENST00000538456 WDHD1O75717 1129 aaPredicted RBP17.68■□□□□ 0.42
SMARCA4-206ENST00000538456 ALDH1L1O75891 902 aa17.68■□□□□ 0.42
SMARCA4-206ENST00000538456 CETPP11597 493 aa17.68■□□□□ 0.42
SMARCA4-206ENST00000538456 WDR63Q8IWG1 891 aa17.68■□□□□ 0.42
SMARCA4-206ENST00000538456 ZKSCAN4Q969J2 545 aaPredicted RBP17.68■□□□□ 0.42
SMARCA4-206ENST00000538456 TEKT1Q969V4 418 aa17.68■□□□□ 0.42
SMARCA4-206ENST00000538456 KAZALD1Q96I82 304 aa17.68■□□□□ 0.42
SMARCA4-206ENST00000538456 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
SMARCA4-206ENST00000538456 COLQQ9Y215 455 aaPredicted RBP17.68■□□□□ 0.42
SMARCA4-206ENST00000538456 MROH5Q6ZUA9 1318 aa17.68■□□□□ 0.42
SMARCA4-206ENST00000538456 MYH13Q9UKX3 1938 aa17.67■□□□□ 0.42
SMARCA4-206ENST00000538456 BTBD19C9JJ37 291 aa17.67■□□□□ 0.42
SMARCA4-206ENST00000538456 TLR2O60603 784 aa17.67■□□□□ 0.42
SMARCA4-206ENST00000538456 NBPF7P0C2Y1 421 aaPredicted RBP17.67■□□□□ 0.42
SMARCA4-206ENST00000538456 LACTBP83111 547 aaPredicted RBP17.67■□□□□ 0.42
SMARCA4-206ENST00000538456 KIF22Q14807 665 aa17.67■□□□□ 0.42
SMARCA4-206ENST00000538456 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
SMARCA4-206ENST00000538456 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
SMARCA4-206ENST00000538456 TMOD2Q9NZR1 351 aa17.67■□□□□ 0.42
SMARCA4-206ENST00000538456 RIPOR2Q9Y4F9 1068 aa17.67■□□□□ 0.42
SMARCA4-206ENST00000538456 IRF6O14896 467 aa17.66■□□□□ 0.42
SMARCA4-206ENST00000538456 SNAPC2Q13487 334 aa17.66■□□□□ 0.42
SMARCA4-206ENST00000538456 LRRC24Q50LG9 513 aa17.66■□□□□ 0.42
SMARCA4-206ENST00000538456 CAVIN4Q5BKX8 364 aa17.66■□□□□ 0.42
SMARCA4-206ENST00000538456 METTL24Q5JXM2 366 aa17.66■□□□□ 0.42
SMARCA4-206ENST00000538456 FBXO33Q7Z6M2 555 aa17.66■□□□□ 0.42
SMARCA4-206ENST00000538456 ERO1BQ86YB8 467 aa17.66■□□□□ 0.42
SMARCA4-206ENST00000538456 TBC1D22AQ8WUA7 517 aa17.66■□□□□ 0.42
SMARCA4-206ENST00000538456 BICC1Q9H694 974 aaKnown RBP17.66■□□□□ 0.42
SMARCA4-206ENST00000538456 AK9Q5TCS8 1911 aa17.66■□□□□ 0.42
SMARCA4-206ENST00000538456 H0YGN5 161 aa17.64■□□□□ 0.41
SMARCA4-206ENST00000538456 BCAMP50895 628 aa17.64■□□□□ 0.41
SMARCA4-206ENST00000538456 HDLBPQ00341 1268 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-206ENST00000538456 ZDHHC15Q96MV8 337 aa17.64■□□□□ 0.41
SMARCA4-206ENST00000538456 SZT2Q5T011 3432 aa17.64■□□□□ 0.41
SMARCA4-206ENST00000538456 PPIL2Q13356 520 aa17.63■□□□□ 0.41
SMARCA4-206ENST00000538456 MIGA2Q7L4E1 593 aa17.63■□□□□ 0.41
SMARCA4-206ENST00000538456 KLHDC4Q8TBB5 520 aa17.63■□□□□ 0.41
SMARCA4-206ENST00000538456 HOOK2Q96ED9 719 aa17.63■□□□□ 0.41
SMARCA4-206ENST00000538456 ZCCHC17Q9NP64 241 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-206ENST00000538456 CPA4Q9UI42 421 aa17.63■□□□□ 0.41
SMARCA4-206ENST00000538456 DCAF15Q66K64 600 aa17.62■□□□□ 0.41
SMARCA4-206ENST00000538456 APOBEC3HQ6NTF7 200 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-206ENST00000538456 FAM83AQ86UY5 434 aa17.62■□□□□ 0.41
SMARCA4-206ENST00000538456 ANKRD44Q8N8A2 993 aa17.62■□□□□ 0.41
SMARCA4-206ENST00000538456 VGLL2Q8N8G2 317 aa17.62■□□□□ 0.41
SMARCA4-206ENST00000538456 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-206ENST00000538456 MAST3O60307 1309 aa17.62■□□□□ 0.41
SMARCA4-206ENST00000538456 PDE8BO95263 885 aa17.61■□□□□ 0.41
SMARCA4-206ENST00000538456 GNRH1P01148 92 aa17.61■□□□□ 0.41
SMARCA4-206ENST00000538456 INPP5BP32019 993 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms