RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 KDRP35968 1356 aa7.25□□□□□ -1.25
SNHG1-207ENST00000537965 C9orf131Q5VYM1 1079 aa7.25□□□□□ -1.25
SNHG1-207ENST00000537965 NBPF10Q6P3W6 841 aaKnown RBP7.25□□□□□ -1.25
SNHG1-207ENST00000537965 ZNF530Q6P9A1 599 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-207ENST00000537965 NBPF15Q8N660 670 aa7.25□□□□□ -1.25
SNHG1-207ENST00000537965 GPR161Q8N6U8 529 aaKnown RBP7.25□□□□□ -1.25
SNHG1-207ENST00000537965 ETNK1Q9HBU6 452 aa7.25□□□□□ -1.25
SNHG1-207ENST00000537965 STAU1O95793 577 aaKnown RBP7.24□□□□□ -1.25
SNHG1-207ENST00000537965 CRKLP46109 303 aaKnown RBP7.24□□□□□ -1.25
SNHG1-207ENST00000537965 SCNN1DP51172 638 aa7.24□□□□□ -1.25
SNHG1-207ENST00000537965 EML3Q32P44 896 aa7.24□□□□□ -1.25
SNHG1-207ENST00000537965 KLRG1Q96E93 195 aa7.24□□□□□ -1.25
SNHG1-207ENST00000537965 ZSCAN10Q96SZ4 725 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-207ENST00000537965 NMRK2Q9NPI5 230 aa7.24□□□□□ -1.25
SNHG1-207ENST00000537965 DYRK1BQ9Y463 629 aa7.24□□□□□ -1.25
SNHG1-207ENST00000537965 PTCD1O75127 700 aaKnown RBP7.23□□□□□ -1.25
SNHG1-207ENST00000537965 INHAP05111 366 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 KCNA3P22001 575 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 TNNT2P45379 298 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-207ENST00000537965 SV2AQ7L0J3 742 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 TAS1R3Q7RTX0 852 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 VWA5B2Q8N398 1253 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 SMC1BQ8NDV3 1235 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 SLC4A9Q96Q91 983 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 UCN2Q96RP3 112 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 POLR3GLQ9BT43 218 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 RNF181Q9P0P0 153 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 NOD1Q9Y239 953 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 PCDHGA11Q9Y5H2 935 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 USP42Q9H9J4 1324 aaKnown RBP7.23□□□□□ -1.25
SNHG1-207ENST00000537965 DLEC1Q9Y238 1755 aa7.23□□□□□ -1.25
SNHG1-207ENST00000537965 USP17L5A8MUK1 530 aa7.22□□□□□ -1.25
SNHG1-207ENST00000537965 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-207ENST00000537965 GDF10P55107 478 aa7.22□□□□□ -1.25
SNHG1-207ENST00000537965 NCOA4Q13772 614 aa7.22□□□□□ -1.25
SNHG1-207ENST00000537965 MORC1Q86VD1 984 aa7.22□□□□□ -1.25
SNHG1-207ENST00000537965 JMYQ8N9B5 988 aa7.22□□□□□ -1.25
SNHG1-207ENST00000537965 GMCL1Q96IK5 515 aa7.22□□□□□ -1.25
SNHG1-207ENST00000537965 RRAGCQ9HB90 399 aa7.22□□□□□ -1.25
SNHG1-207ENST00000537965 CUEDC1Q9NWM3 386 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-207ENST00000537965 CLSPNQ9HAW4 1339 aa7.22□□□□□ -1.25
SNHG1-207ENST00000537965 TJP1Q07157 1748 aa7.21□□□□□ -1.25
SNHG1-207ENST00000537965 PCNTO95613 3336 aa7.21□□□□□ -1.25
SNHG1-207ENST00000537965 CDC14CA4D256 554 aa7.21□□□□□ -1.26
SNHG1-207ENST00000537965 VEGFAP15692 232 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-207ENST00000537965 LMNB1P20700 586 aa7.21□□□□□ -1.26
SNHG1-207ENST00000537965 TM4SF1P30408 202 aa7.21□□□□□ -1.26
SNHG1-207ENST00000537965 TRIM26Q12899 539 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-207ENST00000537965 AKAP4Q5JQC9 854 aa7.21□□□□□ -1.26
SNHG1-207ENST00000537965 TBC1D9Q6ZT07 1266 aa7.21□□□□□ -1.26
SNHG1-207ENST00000537965 PLEKHM2Q8IWE5 1019 aa7.21□□□□□ -1.26
SNHG1-207ENST00000537965 PANK3Q9H999 370 aa7.21□□□□□ -1.26
SNHG1-207ENST00000537965 TIMMDC1Q9NPL8 285 aa7.21□□□□□ -1.26
SNHG1-207ENST00000537965 KDM6AO15550 1401 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-207ENST00000537965 FER1L6Q2WGJ9 1857 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 GLTPD2A6NH11 291 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 TMEM229AB2RXF0 380 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 H0YIN7 160 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 POLRMTO00411 1230 aaKnown RBP7.2□□□□□ -1.26
SNHG1-207ENST00000537965 ATP9BO43861 1147 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 GTF2E1P29083 439 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-207ENST00000537965 KRT76Q01546 638 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 TLR1Q15399 786 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 GNASQ5JWF2 1037 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 SULT6B1Q6IMI4 303 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 TMEM214Q6NUQ4 689 aaKnown RBP7.2□□□□□ -1.26
SNHG1-207ENST00000537965 INTS5Q6P9B9 1019 aaKnown RBP7.2□□□□□ -1.26
SNHG1-207ENST00000537965 TRIM22Q8IYM9 498 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 DEPDC4Q8N2C3 294 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 TTLL6Q8N841 843 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 GLMNQ92990 594 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 SLC52A2Q9HAB3 445 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 STK17AQ9UEE5 414 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 SRP68Q9UHB9 627 aaKnown RBP7.2□□□□□ -1.26
SNHG1-207ENST00000537965 NARFQ9UHQ1 456 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 KNSTRNQ9Y448 316 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 NRXN2Q9P2S2 1712 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 KCPQ6ZWJ8 1503 aa7.2□□□□□ -1.26
SNHG1-207ENST00000537965 CACNA1SQ13698 1873 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 ADAMTS7Q9UKP4 1686 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 A0A087WZG4 1122 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 H7C1W4 665 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 STARD3NLO95772 234 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 CHRNA5P30532 468 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 SMTNP53814 917 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 GTF2IP78347 998 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 DDR1Q08345 913 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 DBN1Q16643 649 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 C4orf17Q53FE4 359 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 USPL1Q5W0Q7 1092 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 NPM2Q86SE8 214 aaKnown RBP7.19□□□□□ -1.26
SNHG1-207ENST00000537965 ZSCAN1Q8NBB4 408 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 RHBDD1Q8TEB9 315 aa7.19□□□□□ -1.26
SNHG1-207ENST00000537965 GAS2L1Q99501 681 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-207ENST00000537965 COL25A1Q9BXS0 654 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-207ENST00000537965 TEX13AQ9BXU3 409 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-207ENST00000537965 TIAM2Q8IVF5 1701 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 SCN4AP35499 1836 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 A0A1B0GTH6 734 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 USP17L3A6NCW0 530 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms