RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 RNF186Q9NXI6 227 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 SAGE1Q9NXZ1 904 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 SERPINA10Q9UK55 444 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 SSC5DA1L4H1 1573 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 IPO8O15397 1037 aaKnown RBP10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 PPP1R12BO60237 982 aaPredicted RBP10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 BCAR3O75815 825 aa10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 CIAO1O76071 339 aa10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 SPDYE2Q495Y8 402 aa10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 INTS3Q68E01 1043 aaKnown RBP10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 REM2Q8IYK8 340 aaPredicted RBP10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 DZIP1LQ8IYY4 767 aaKnown RBP10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 LPIN2Q92539 896 aa10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 ABHD8Q96I13 439 aa10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 TDRD3Q9H7E2 651 aaKnown RBP10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 ZNF70Q9UC06 446 aaPredicted RBP10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 PA2G4Q9UQ80 394 aaKnown RBP10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 TNNQ9UQP3 1299 aa10.63□□□□□ -0.71
SFSWAP-202ENST00000535202 TCP10L2B9ZVM9 353 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 GNAI3P08754 354 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 TRIM27P14373 513 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 DGKZQ13574 1117 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 TNFAIP1Q13829 316 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 RASA3Q14644 834 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 ATP2B3Q16720 1220 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 SUPT20HL1Q3ZLR7 823 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 NBPF12Q5TAG4 269 aaPredicted RBP10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 ATF7IPQ6VMQ6 1270 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 CLUAP1Q96AJ1 413 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 MCOLN1Q9GZU1 580 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 CEP126Q9P2H0 1117 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
SFSWAP-202ENST00000535202 IL15P40933 162 aaPredicted RBP10.61□□□□□ -0.71
SFSWAP-202ENST00000535202 MAP3K11Q16584 847 aa10.61□□□□□ -0.71
SFSWAP-202ENST00000535202 LDLRAD1Q5T700 205 aa10.61□□□□□ -0.71
SFSWAP-202ENST00000535202 TEKT1Q969V4 418 aa10.61□□□□□ -0.71
SFSWAP-202ENST00000535202 COPRSQ9NQ92 184 aa10.61□□□□□ -0.71
SFSWAP-202ENST00000535202 OTOFQ9HC10 1997 aa10.61□□□□□ -0.71
SFSWAP-202ENST00000535202 MAST3O60307 1309 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 CCDC85CA6NKD9 419 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 SRGAP3O43295 1099 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 IREB2P48200 963 aaKnown RBP10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 TNNI2P48788 182 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 CACNB3P54284 484 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 HDLBPQ00341 1268 aaKnown RBP10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 SREBF2Q12772 1141 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 CDAN1Q8IWY9 1227 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 WDR66Q8TBY9 1149 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 SLC10A4Q96EP9 437 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 CLMNQ96JQ2 1002 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 GNL3LQ9NVN8 582 aaKnown RBP10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 TMOD2Q9NZR1 351 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 SUGT1Q9Y2Z0 365 aa10.6□□□□□ -0.71
SFSWAP-202ENST00000535202 USP2O75604 605 aaPredicted RBP10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 TBC1D8O95759 1140 aa10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 GNAI2P04899 355 aa10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 ADORA1P30542 326 aa10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 DEKP35659 375 aaKnown RBP10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 PHKA1P46020 1223 aa10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 TM4SF4P48230 202 aa10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 ZKSCAN2Q63HK3 967 aa10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 TMEM57Q8N5G2 664 aa10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 WNK4Q96J92 1243 aa10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 ZDHHC15Q96MV8 337 aa10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 TMEM39BQ9GZU3 492 aa10.59□□□□□ -0.71
SFSWAP-202ENST00000535202 LAMB1P07942 1786 aa10.58□□□□□ -0.72
SFSWAP-202ENST00000535202 MTX1Q13505 466 aa10.58□□□□□ -0.72
SFSWAP-202ENST00000535202 APOBEC3HQ6NTF7 200 aaKnown RBP10.58□□□□□ -0.72
SFSWAP-202ENST00000535202 ANKRD13AQ8IZ07 590 aa10.58□□□□□ -0.72
SFSWAP-202ENST00000535202 TEPSINQ96N21 525 aa10.58□□□□□ -0.72
SFSWAP-202ENST00000535202 ELP3Q9H9T3 547 aa10.58□□□□□ -0.72
SFSWAP-202ENST00000535202 DENND2AQ9ULE3 1009 aa10.58□□□□□ -0.72
SFSWAP-202ENST00000535202 A0A1B0GUL7 405 aa10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 MANSC4A6NHS7 340 aaPredicted RBP10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 UNCXA6NJT0 531 aa10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 LDHBP07195 334 aaKnown RBP10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 ZBTB48P10074 688 aaPredicted RBP10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 PRDX5P30044 214 aa10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 TIMM10P62072 90 aa10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 TFCP2Q12800 502 aa10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 DIXDC1Q155Q3 683 aa10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 CCDC102BQ68D86 513 aa10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 HHIPL2Q6UWX4 724 aa10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 FTSJ3Q8IY81 847 aaKnown RBP10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 MRIQ9BWK5 157 aa10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 ZBED9Q6R2W3 1325 aa10.57□□□□□ -0.72
SFSWAP-202ENST00000535202 AK9Q5TCS8 1911 aa10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 PNMA6EA0A0J9YXQ4 647 aa10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 SEMA3EO15041 775 aa10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 GJA5P36382 358 aa10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 ZNF296Q8WUU4 475 aaPredicted RBP10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 OPTNQ96CV9 577 aa10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 XAGE2Q96GT9 111 aa10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 NEUROD6Q96NK8 337 aa10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 AKAP2Q9Y2D5 859 aa10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 DAGLAQ9Y4D2 1042 aa10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 MYH2Q9UKX2 1941 aa10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 SALL1Q9NSC2 1324 aa10.56□□□□□ -0.72
SFSWAP-202ENST00000535202 GPR25O00155 361 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms