RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 GGA1Q9UJY5 639 aa20.36■□□□□ 0.85
VPS51-216ENST00000534591 PPEF1O14829 653 aaPredicted RBP20.35■□□□□ 0.85
VPS51-216ENST00000534591 FRAT2O75474 233 aaPredicted RBP20.35■□□□□ 0.85
VPS51-216ENST00000534591 ADCK5Q3MIX3 580 aa20.35■□□□□ 0.85
VPS51-216ENST00000534591 VPS53Q5VIR6 699 aa20.35■□□□□ 0.85
VPS51-216ENST00000534591 TMED8Q6PL24 325 aaPredicted RBP20.35■□□□□ 0.85
VPS51-216ENST00000534591 SPRYD3Q8NCJ5 442 aa20.35■□□□□ 0.85
VPS51-216ENST00000534591 RNF181Q9P0P0 153 aa20.35■□□□□ 0.85
VPS51-216ENST00000534591 IQSEC3Q9UPP2 1182 aaPredicted RBP20.35■□□□□ 0.85
VPS51-216ENST00000534591 LRRC37AA6NMS7 1700 aa20.35■□□□□ 0.85
VPS51-216ENST00000534591 COL1A1P02452 1464 aaPredicted RBP20.34■□□□□ 0.85
VPS51-216ENST00000534591 RUFY3Q7L099 469 aa20.34■□□□□ 0.85
VPS51-216ENST00000534591 ZNF804AQ7Z570 1209 aa20.34■□□□□ 0.85
VPS51-216ENST00000534591 MAGEB6Q8N7X4 407 aa20.34■□□□□ 0.85
VPS51-216ENST00000534591 C7orf43Q8WVR3 580 aa20.34■□□□□ 0.85
VPS51-216ENST00000534591 CHMP5Q9NZZ3 219 aa20.34■□□□□ 0.85
VPS51-216ENST00000534591 CIZ1Q9ULV3 898 aaPredicted RBP20.34■□□□□ 0.85
VPS51-216ENST00000534591 NSFL1CQ9UNZ2 370 aaKnown RBP20.34■□□□□ 0.85
VPS51-216ENST00000534591 ATP6V0A2Q9Y487 856 aa20.34■□□□□ 0.85
VPS51-216ENST00000534591 PDRG1Q9NUG6 133 aa20.33■□□□□ 0.85
VPS51-216ENST00000534591 SNED1Q8TER0 1413 aa20.33■□□□□ 0.85
VPS51-216ENST00000534591 MYH13Q9UKX3 1938 aa20.33■□□□□ 0.84
VPS51-216ENST00000534591 UFL1O94874 794 aa20.32■□□□□ 0.84
VPS51-216ENST00000534591 CYP21A2P08686 494 aa20.32■□□□□ 0.84
VPS51-216ENST00000534591 DDIT3P35638 169 aa20.32■□□□□ 0.84
VPS51-216ENST00000534591 BLOC1S2Q6QNY1 142 aa20.32■□□□□ 0.84
VPS51-216ENST00000534591 TXNRD3Q86VQ6 643 aa20.32■□□□□ 0.84
VPS51-216ENST00000534591 AIDAQ96BJ3 306 aa20.32■□□□□ 0.84
VPS51-216ENST00000534591 TMX3Q96JJ7 454 aa20.32■□□□□ 0.84
VPS51-216ENST00000534591 ALDH8A1Q9H2A2 487 aaPredicted RBP20.32■□□□□ 0.84
VPS51-216ENST00000534591 TDRD7Q8NHU6 1098 aaKnown RBP20.32■□□□□ 0.84
VPS51-216ENST00000534591 STRBPQ96SI9 672 aaKnown RBP20.32■□□□□ 0.84
VPS51-216ENST00000534591 ABCF2Q9UG63 623 aa20.32■□□□□ 0.84
VPS51-216ENST00000534591 FOXP2O15409 715 aa20.31■□□□□ 0.84
VPS51-216ENST00000534591 HMGB1P09429 215 aaKnown RBP20.31■□□□□ 0.84
VPS51-216ENST00000534591 CUL4AQ13619 759 aa20.31■□□□□ 0.84
VPS51-216ENST00000534591 ZGPATQ8N5A5 531 aaKnown RBP20.31■□□□□ 0.84
VPS51-216ENST00000534591 CWC22Q9HCG8 908 aaKnown RBP20.31■□□□□ 0.84
VPS51-216ENST00000534591 RAI14Q9P0K7 980 aa20.31■□□□□ 0.84
VPS51-216ENST00000534591 LIMCH1Q9UPQ0 1083 aa20.31■□□□□ 0.84
VPS51-216ENST00000534591 GNAT2P19087 354 aa20.3■□□□□ 0.84
VPS51-216ENST00000534591 RPS6KB1P23443 525 aa20.3■□□□□ 0.84
VPS51-216ENST00000534591 AK2P54819 239 aa20.3■□□□□ 0.84
VPS51-216ENST00000534591 ALX1Q15699 326 aa20.3■□□□□ 0.84
VPS51-216ENST00000534591 IMMTQ16891 758 aaKnown RBP20.3■□□□□ 0.84
VPS51-216ENST00000534591 SPTY2D1Q68D10 685 aaPredicted RBP20.3■□□□□ 0.84
VPS51-216ENST00000534591 TBC1D16Q8TBP0 767 aa20.3■□□□□ 0.84
VPS51-216ENST00000534591 WDR66Q8TBY9 1149 aa20.3■□□□□ 0.84
VPS51-216ENST00000534591 NEK1Q96PY6 1258 aa20.3■□□□□ 0.84
VPS51-216ENST00000534591 TMX4Q9H1E5 349 aaPredicted RBP20.3■□□□□ 0.84
VPS51-216ENST00000534591 GPBP1L1Q9HC44 474 aaPredicted RBP20.3■□□□□ 0.84
VPS51-216ENST00000534591 SALL1Q9NSC2 1324 aa20.3■□□□□ 0.84
VPS51-216ENST00000534591 LTBP1Q14766 1721 aa20.29■□□□□ 0.84
VPS51-216ENST00000534591 FGAP02671 866 aa20.29■□□□□ 0.84
VPS51-216ENST00000534591 LMNB1P20700 586 aa20.29■□□□□ 0.84
VPS51-216ENST00000534591 CYP7A1P22680 504 aa20.29■□□□□ 0.84
VPS51-216ENST00000534591 ANKRD1Q15327 319 aa20.29■□□□□ 0.84
VPS51-216ENST00000534591 INTS4Q96HW7 963 aaKnown RBP20.29■□□□□ 0.84
VPS51-216ENST00000534591 ZSCAN31Q96LW9 406 aaPredicted RBP20.29■□□□□ 0.84
VPS51-216ENST00000534591 TAF6LQ9Y6J9 622 aa20.29■□□□□ 0.84
VPS51-216ENST00000534591 ZMYM6O95789 1325 aa20.29■□□□□ 0.84
VPS51-216ENST00000534591 PATL2C9JE40 543 aaKnown RBP20.27■□□□□ 0.84
VPS51-216ENST00000534591 MBD4O95243 580 aa20.27■□□□□ 0.84
VPS51-216ENST00000534591 CPA1P15085 419 aa20.27■□□□□ 0.84
VPS51-216ENST00000534591 CHAF1AQ13111 956 aaPredicted RBP20.27■□□□□ 0.84
VPS51-216ENST00000534591 TAOK3Q9H2K8 898 aa20.27■□□□□ 0.84
VPS51-216ENST00000534591 POLLQ9UGP5 575 aa20.27■□□□□ 0.84
VPS51-216ENST00000534591 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.84
VPS51-216ENST00000534591 COL4A5P29400 1685 aa20.27■□□□□ 0.84
VPS51-216ENST00000534591 C6orf229H3BNL8 230 aa20.27■□□□□ 0.83
VPS51-216ENST00000534591 IL1R1P14778 569 aa20.27■□□□□ 0.83
VPS51-216ENST00000534591 CCDC93Q567U6 631 aa20.27■□□□□ 0.83
VPS51-216ENST00000534591 NAA16Q6N069 864 aaPredicted RBP20.27■□□□□ 0.83
VPS51-216ENST00000534591 MPNDQ8N594 471 aa20.27■□□□□ 0.83
VPS51-216ENST00000534591 SH2B1Q9NRF2 756 aaPredicted RBP20.27■□□□□ 0.83
VPS51-216ENST00000534591 DUOX1Q9NRD9 1551 aa20.26■□□□□ 0.83
VPS51-216ENST00000534591 E7EWF7 191 aa20.26■□□□□ 0.83
VPS51-216ENST00000534591 TTLL5Q6EMB2 1281 aa20.26■□□□□ 0.83
VPS51-216ENST00000534591 CD209Q9NNX6 404 aa20.26■□□□□ 0.83
VPS51-216ENST00000534591 NMRK2Q9NPI5 230 aa20.26■□□□□ 0.83
VPS51-216ENST00000534591 FOXD4L1Q9NU39 408 aa20.26■□□□□ 0.83
VPS51-216ENST00000534591 ZNF213O14771 459 aa20.25■□□□□ 0.83
VPS51-216ENST00000534591 APPP05067 770 aa20.25■□□□□ 0.83
VPS51-216ENST00000534591 STOX1Q6ZVD7 989 aa20.25■□□□□ 0.83
VPS51-216ENST00000534591 NOL8Q76FK4 1167 aaKnown RBP20.25■□□□□ 0.83
VPS51-216ENST00000534591 NSUN4Q96CB9 384 aaKnown RBP20.25■□□□□ 0.83
VPS51-216ENST00000534591 NACAP1Q9BZK3 213 aa20.25■□□□□ 0.83
VPS51-216ENST00000534591 ARMT1Q9H993 441 aa20.25■□□□□ 0.83
VPS51-216ENST00000534591 MAST2Q6P0Q8 1798 aa20.24■□□□□ 0.83
VPS51-216ENST00000534591 MAGEB6P1A0A0J9YX57 407 aa20.24■□□□□ 0.83
VPS51-216ENST00000534591 KIF3CO14782 793 aa20.24■□□□□ 0.83
VPS51-216ENST00000534591 SOGA3Q5TF21 947 aa20.24■□□□□ 0.83
VPS51-216ENST00000534591 DHX32Q7L7V1 743 aaKnown RBP20.24■□□□□ 0.83
VPS51-216ENST00000534591 GPR101Q96P66 508 aaPredicted RBP20.24■□□□□ 0.83
VPS51-216ENST00000534591 MECOMQ03112 1051 aa20.23■□□□□ 0.83
VPS51-216ENST00000534591 DPP8Q6V1X1 898 aaPredicted RBP20.23■□□□□ 0.83
VPS51-216ENST00000534591 LCORLQ8N3X6 602 aa20.23■□□□□ 0.83
VPS51-216ENST00000534591 COA1Q9GZY4 146 aa20.23■□□□□ 0.83
VPS51-216ENST00000534591 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 LDHBP07195 334 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms