RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	MICALL1	Q8N3F8	863 aa		9.13	□□□□□ -0.95
PICALM-223	ENST00000534412	GSX2	Q9BZM3	304 aa		9.13	□□□□□ -0.95
PICALM-223	ENST00000534412	BCS1L	Q9Y276	419 aa		9.13	□□□□□ -0.95
PICALM-223	ENST00000534412	PPL	O60437	1756 aa		9.13	□□□□□ -0.95
PICALM-223	ENST00000534412	KIF1A	Q12756	1690 aa		9.13	□□□□□ -0.95
PICALM-223	ENST00000534412	ABCC11	Q96J66	1382 aa		9.12	□□□□□ -0.95
PICALM-223	ENST00000534412	ALB	P02768	609 aa		9.12	□□□□□ -0.95
PICALM-223	ENST00000534412	MYO19	Q96H55	970 aa		9.12	□□□□□ -0.95
PICALM-223	ENST00000534412	PRDM6	Q9NQX0	595 aa		9.12	□□□□□ -0.95
PICALM-223	ENST00000534412	DMGDH	Q9UI17	866 aa	Known RBP	9.12	□□□□□ -0.95
PICALM-223	ENST00000534412	TNS3	Q68CZ2	1445 aa		9.12	□□□□□ -0.95
PICALM-223	ENST00000534412	RRBP1	Q9P2E9	1410 aa	Known RBP	9.12	□□□□□ -0.95
PICALM-223	ENST00000534412	KNDC1	Q76NI1	1749 aa		9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	FMN2	Q9NZ56	1722 aa		9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	C1QTNF9B	B2RNN3	333 aa		9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	PRMT3	O60678	531 aa		9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	LILRB5	O75023	590 aa		9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	NFKB1	P19838	968 aa		9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	SF3B2	Q13435	895 aa	Known RBP	9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	PCSK7	Q16549	785 aa		9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	PRIMPOL	Q96LW4	560 aa		9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	STARD13	Q9Y3M8	1113 aa		9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	NWD2	Q9ULI1	1742 aa		9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	PLEKHH1	Q9ULM0	1364 aa		9.11	□□□□□ -0.95
PICALM-223	ENST00000534412	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	MICAL2	O94851	1124 aa		9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	APBA3	O96018	575 aa		9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	INPP5B	P32019	993 aa		9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	BAG6	P46379	1132 aa		9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	TRIM28	Q13263	835 aa	Known RBP	9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	IFT43	Q96FT9	208 aa		9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	SLC6A14	Q9UN76	642 aa		9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	PIK3C2G	O75747	1445 aa		9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	SPATA31E1	Q6ZUB1	1445 aa		9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	PLCH1	Q4KWH8	1693 aa		9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	BRWD3	Q6RI45	1802 aa		9.1	□□□□□ -0.95
PICALM-223	ENST00000534412	ADGRF5	Q8IZF2	1346 aa		9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	DISP2	A7MBM2	1401 aa		9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	FKBP5	Q13451	457 aa	Predicted RBP	9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	KRT27	Q7Z3Y8	459 aa		9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	WAPL	Q7Z5K2	1190 aa		9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	CD163	Q86VB7	1156 aa		9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	JPH1	Q9HDC5	661 aa	Predicted RBP	9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	C11orf16	Q9NQ32	467 aa		9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	DNAJB12	Q9NXW2	375 aa	Known RBP	9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	SERPINA10	Q9UK55	444 aa		9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	ZMIZ1	Q9ULJ6	1067 aa		9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	SBNO1	A3KN83	1393 aa		9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	ANKRD30B	Q9BXX2	1392 aa		9.09	□□□□□ -0.95
PICALM-223	ENST00000534412	NRXN1	Q9ULB1	1477 aa		9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	ABCA3	Q99758	1704 aa		9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	YTHDC2	Q9H6S0	1430 aa	Known RBP	9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	ATG7	O95352	703 aa		9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	ARID4A	P29374	1257 aa	Predicted RBP	9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	CHRNA4	P43681	627 aa		9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	TRAPPC3L	Q5T215	181 aa		9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	C8orf86	Q6ZUL3	223 aa		9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	KRT28	Q7Z3Y7	464 aa		9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	KRT25	Q7Z3Z0	450 aa		9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	GTF3C3	Q9Y5Q9	886 aa		9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	ARHGEF10	O15013	1369 aa		9.08	□□□□□ -0.96
PICALM-223	ENST00000534412	STK32A	Q8WU08	396 aa		9.07	□□□□□ -0.96
PICALM-223	ENST00000534412	NUDT8	Q8WV74	236 aa		9.07	□□□□□ -0.96
PICALM-223	ENST00000534412	NACC1	Q96RE7	527 aa		9.07	□□□□□ -0.96
PICALM-223	ENST00000534412	NRAP	Q86VF7	1730 aa		9.06	□□□□□ -0.96
PICALM-223	ENST00000534412	IFT172	Q9UG01	1749 aa		9.06	□□□□□ -0.96
PICALM-223	ENST00000534412	RGS9	O75916	674 aa	Predicted RBP	9.06	□□□□□ -0.96
PICALM-223	ENST00000534412	RARA	P10276	462 aa		9.06	□□□□□ -0.96
PICALM-223	ENST00000534412	PSAPL1	Q6NUJ1	521 aa		9.06	□□□□□ -0.96
PICALM-223	ENST00000534412	C20orf204	Q6ZNR8	217 aa		9.06	□□□□□ -0.96
PICALM-223	ENST00000534412	TREML1	Q86YW5	311 aa		9.06	□□□□□ -0.96
PICALM-223	ENST00000534412	PBXIP1	Q96AQ6	731 aa		9.06	□□□□□ -0.96
PICALM-223	ENST00000534412	STK26	Q9P289	416 aa		9.06	□□□□□ -0.96
PICALM-223	ENST00000534412	LRFN2	Q9ULH4	789 aa		9.06	□□□□□ -0.96
PICALM-223	ENST00000534412	RTCB	Q9Y3I0	505 aa	Known RBP	9.06	□□□□□ -0.96
PICALM-223	ENST00000534412	ANKAR	Q7Z5J8	1434 aa		9.05	□□□□□ -0.96
PICALM-223	ENST00000534412		K7ELQ4	463 aa	Predicted RBP	9.05	□□□□□ -0.96
PICALM-223	ENST00000534412	ADAM23	O75077	832 aa		9.05	□□□□□ -0.96
PICALM-223	ENST00000534412	MAP3K6	O95382	1288 aa		9.05	□□□□□ -0.96
PICALM-223	ENST00000534412	NID1	P14543	1247 aa		9.05	□□□□□ -0.96
PICALM-223	ENST00000534412	BRD2	P25440	801 aa	Known RBP	9.05	□□□□□ -0.96
PICALM-223	ENST00000534412	GATA4	P43694	442 aa		9.05	□□□□□ -0.96
PICALM-223	ENST00000534412	COX20	Q5RI15	118 aa		9.05	□□□□□ -0.96
PICALM-223	ENST00000534412	C16orf46	Q6P387	395 aa		9.05	□□□□□ -0.96
PICALM-223	ENST00000534412	FAM35A	Q86V20	835 aa		9.05	□□□□□ -0.96
PICALM-223	ENST00000534412	THSD7A	Q9UPZ6	1657 aa		9.04	□□□□□ -0.96
PICALM-223	ENST00000534412	FAM83G	A6ND36	823 aa		9.04	□□□□□ -0.96
PICALM-223	ENST00000534412	SASH3	O75995	380 aa		9.04	□□□□□ -0.96
PICALM-223	ENST00000534412	TARS	P26639	723 aa	Known RBP	9.04	□□□□□ -0.96
PICALM-223	ENST00000534412	TMEM132E	Q6IEE7	984 aa		9.04	□□□□□ -0.96
PICALM-223	ENST00000534412	DHX32	Q7L7V1	743 aa	Known RBP	9.04	□□□□□ -0.96
PICALM-223	ENST00000534412	RGL4	Q8IZJ4	473 aa		9.04	□□□□□ -0.96
PICALM-223	ENST00000534412	CMTR1	Q8N1G2	835 aa	Known RBP	9.04	□□□□□ -0.96
PICALM-223	ENST00000534412	RGPD1	P0DJD0	1748 aa		9.04	□□□□□ -0.96
PICALM-223	ENST00000534412	ADGRB2	O60241	1585 aa		9.03	□□□□□ -0.96
PICALM-223	ENST00000534412	FAM229A	H3BQW9	127 aa		9.03	□□□□□ -0.96
PICALM-223	ENST00000534412	PTCD1	O75127	700 aa	Known RBP	9.03	□□□□□ -0.96
PICALM-223	ENST00000534412	FURIN	P09958	794 aa		9.03	□□□□□ -0.96
PICALM-223	ENST00000534412	CPB1	P15086	417 aa		9.03	□□□□□ -0.96
PICALM-223	ENST00000534412	GRN	P28799	593 aa	Known RBP	9.03	□□□□□ -0.96

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