RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 GABRQQ9UN88 632 aa13.25□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 OTOFQ9HC10 1997 aa13.25□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 IRF6O14896 467 aa13.24□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 PCCAP05165 728 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.24□□□□□ -0.293e-11■■□□□ 12.5
NEDD8-MDP1-202ENST00000534348 ZKSCAN4Q969J2 545 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 TMEM39BQ9GZU3 492 aa13.24□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 TDRD3Q9H7E2 651 aaKnown RBP13.24□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 TAOK2Q9UL54 1235 aa13.24□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 LEMD3Q9Y2U8 911 aa13.24□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 SPDYE5A6NIY4 337 aa13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 SNAP23O00161 211 aa13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 INHAP05111 366 aa13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 CTSWP56202 376 aa13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 GOLGA2Q08379 1002 aa13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 SNAPC2Q13487 334 aa13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 NECAB2Q7Z6G3 386 aa13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 SLAIN1Q8ND83 568 aa13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 HELBQ8NG08 1087 aaPredicted RBP13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 HYPKQ9NX55 129 aa13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 CWC25Q9NXE8 425 aaPredicted RBP13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 ZNF70Q9UC06 446 aaPredicted RBP13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 MUC3AQ02505 3323 aa13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 TTC28Q96AY4 2481 aa13.23□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 PDHXO00330 501 aa13.22□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 ADCY3O60266 1144 aa13.22□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 TNFAIP1Q13829 316 aa13.22□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.22□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 TEPSINQ96N21 525 aa13.22□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 PCGF6Q9BYE7 350 aa13.22□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 SNCAIPQ9Y6H5 919 aa13.22□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 IGHMBP2P38935 993 aaKnown RBP13.21□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 FCGRTP55899 365 aa13.21□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 ERO1BQ86YB8 467 aa13.21□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 CCDC191Q8NCU4 936 aa13.21□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 TTLL11Q8NHH1 800 aa13.21□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 PHAXQ9H814 394 aaKnown RBP13.21□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 ZCCHC17Q9NP64 241 aaKnown RBP13.21□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 BABAM1Q9NWV8 329 aa13.21□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 SPEF2Q9C093 1822 aa13.2□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 WRNIP1Q96S55 665 aa13.2□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 TAF5LO75529 589 aa13.19□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 FLT3LGP49771 235 aa13.19□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 ALPK3Q96L96 1907 aa13.19□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 CYP2C8P10632 490 aa13.18□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 CACNB3P54284 484 aa13.18□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 PPIL2Q13356 520 aa13.18□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 MAFAQ8NHW3 353 aaPredicted RBP13.18□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 MPHOSPH8Q99549 860 aa13.18□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 ECM29Q5VYK3 1845 aa13.18□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 CHL1O00533 1208 aa13.17□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 TNNI2P48788 182 aa13.17□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 CHRNDQ07001 517 aa13.17□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 ANKRD23Q86SG2 305 aa13.17□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 FAM122AQ96E09 287 aa13.17□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 CDX2Q99626 313 aaPredicted RBP13.17□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 CRISPLD2Q9H0B8 497 aa13.17□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 PAK6Q9NQU5 681 aaPredicted RBP13.17□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 TTF2Q9UNY4 1162 aaKnown RBP13.17□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 ADGRA2Q96PE1 1338 aa13.16□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 ZNF697Q5TEC3 545 aa13.16□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 DUSP27Q5VZP5 1158 aa13.16□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 DZIP1LQ8IYY4 767 aaKnown RBP13.16□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 NBPF3Q9H094 633 aa13.16□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 TMEM265A0A087WTH1 108 aa13.15□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 TNPO2O14787 897 aaKnown RBP13.15□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 ITGA6P23229 1130 aa13.15□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 PLA2G5P39877 138 aa13.15□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 MIGA2Q7L4E1 593 aa13.15□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 ZNF804AQ7Z570 1209 aa13.15□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 SYMPKQ92797 1274 aaKnown RBP13.15□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 METTL22Q9BUU2 404 aaPredicted RBP13.15□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.15□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 C11orf49Q9H6J7 331 aa13.15□□□□□ -0.3
NEDD8-MDP1-202ENST00000534348 ELL2O00472 640 aaPredicted RBP13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 BCRP11274 1271 aa13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 IL1R1P14778 569 aa13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 INPP5BP32019 993 aa13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 PPATQ06203 517 aa13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 FAM109BQ6ICB4 259 aaPredicted RBP13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 PXYLP1Q8TE99 480 aa13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 PARK7Q99497 189 aaKnown RBP13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 DNAH12Q6ZR08 3092 aa13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 CDH23Q9H251 3354 aa13.14□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 TNFRSF10AO00220 468 aa13.13□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 PLIN1O60240 522 aa13.13□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 CRKP46108 304 aa13.13□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 FKBP1AP62942 108 aaKnown RBP13.13□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 MFSD14BQ5SR56 506 aa13.13□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 MYLIPQ8WY64 445 aa13.13□□□□□ -0.31
NEDD8-MDP1-202ENST00000534348 SERPINA10Q9UK55 444 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms