RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 XIRP1Q702N8 1843 aaKnown RBP18.61■□□□□ 0.57
ATP2C1-224ENST00000533801 ANTXR2P58335 489 aa18.61■□□□□ 0.57
ATP2C1-224ENST00000533801 TTF1Q15361 905 aaPredicted RBP18.61■□□□□ 0.57
ATP2C1-224ENST00000533801 RBM10P98175 930 aaKnown RBP18.61■□□□□ 0.57
ATP2C1-224ENST00000533801 PKD1L3Q7Z443 1732 aa18.61■□□□□ 0.57
ATP2C1-224ENST00000533801 CYP2D7A0A087X1C5 515 aa18.61■□□□□ 0.57
ATP2C1-224ENST00000533801 GNPATO15228 680 aa18.61■□□□□ 0.57
ATP2C1-224ENST00000533801 ZNF34Q8IZ26 560 aa18.61■□□□□ 0.57
ATP2C1-224ENST00000533801 LCORLQ8N3X6 602 aa18.61■□□□□ 0.57
ATP2C1-224ENST00000533801 SLC26A6Q9BXS9 759 aa18.61■□□□□ 0.57
ATP2C1-224ENST00000533801 SPATA31A1Q5TZJ5 1347 aa18.61■□□□□ 0.57
ATP2C1-224ENST00000533801 ZKSCAN5Q9Y2L8 839 aa18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 PARP4Q9UKK3 1724 aaKnown RBP18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 TNS2Q63HR2 1409 aa18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 ADAMTS7Q9UKP4 1686 aa18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 GOLGA8AA7E2F4 631 aa18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 NEDD4P46934 1319 aa18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 CARMIL3Q8ND23 1372 aa18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 RIC1Q4ADV7 1423 aa18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 CCDC69A6NI79 296 aa18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 BECN2A8MW95 431 aa18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 UQCRFS1P1P0C7P4 283 aa18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 CLIC4Q9Y696 253 aa18.6■□□□□ 0.57
ATP2C1-224ENST00000533801 FDPSP14324 419 aaKnown RBP18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 ZNF165P49910 485 aa18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 ZNF396Q96N95 335 aaPredicted RBP18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 ALG1Q9BT22 464 aa18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 PLA2G12BQ9BX93 195 aa18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 SLC51AQ86UW1 340 aa18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 ANKRD18AQ8IVF6 992 aa18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 ZSCAN16Q9H4T2 348 aaPredicted RBP18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 GOLGA6L19H0YKK7 550 aa18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 DHX16O60231 1041 aaKnown RBP18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 CAMTA2O94983 1202 aa18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 CDHR2Q9BYE9 1310 aa18.59■□□□□ 0.57
ATP2C1-224ENST00000533801 AP5Z1O43299 807 aa18.58■□□□□ 0.57
ATP2C1-224ENST00000533801 PDLIM2Q96JY6 352 aa18.58■□□□□ 0.57
ATP2C1-224ENST00000533801 NOL7Q9UMY1 257 aaKnown RBP18.58■□□□□ 0.57
ATP2C1-224ENST00000533801 STRCQ7RTU9 1775 aa18.58■□□□□ 0.57
ATP2C1-224ENST00000533801 SPECC1Q5M775 1068 aa18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 NBPF5PQ86XG9 351 aaPredicted RBP18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 IFNL3Q8IZI9 196 aa18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 ZNF652Q9Y2D9 606 aa18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 SLC12A7Q9Y666 1083 aa18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 MRVI1Q9Y6F6 885 aa18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 ERVV-1B6SEH8 477 aa18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 RANBP6O60518 1105 aaKnown RBP18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 CPLX2Q6PUV4 134 aaKnown RBP18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 MFSD6Q6ZSS7 791 aa18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 MB21D2Q8IYB1 491 aaPredicted RBP18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 GOLPH3LQ9H4A5 285 aa18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 ANGEL1Q9UNK9 670 aaKnown RBP18.58■□□□□ 0.56
ATP2C1-224ENST00000533801 ZBTB43O43298 467 aa18.57■□□□□ 0.56
ATP2C1-224ENST00000533801 MEX3CQ5U5Q3 659 aaKnown RBP18.57■□□□□ 0.56
ATP2C1-224ENST00000533801 CBX8Q9HC52 389 aa18.57■□□□□ 0.56
ATP2C1-224ENST00000533801 MROH5Q6ZUA9 1318 aa18.57■□□□□ 0.56
ATP2C1-224ENST00000533801 TRIM29Q14134 588 aa18.57■□□□□ 0.56
ATP2C1-224ENST00000533801 VGLL2Q8N8G2 317 aa18.57■□□□□ 0.56
ATP2C1-224ENST00000533801 CELF1Q92879 486 aaKnown RBP18.57■□□□□ 0.56
ATP2C1-224ENST00000533801 LINC00116Q8NCU8 138 aa18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 SMARCC2Q8TAQ2 1214 aa18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 STRBPQ96SI9 672 aaKnown RBP18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 DDX19AQ9NUU7 478 aaKnown RBP18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 ZPR1O75312 459 aa18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 DYNLL1P63167 89 aaKnown RBP18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 ZNF274Q96GC6 653 aaPredicted RBP18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 CRYBG1Q9Y4K1 1723 aa18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 KLRK1P26718 216 aa18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 FAM200AQ8TCP9 573 aa18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 NACAP1Q9BZK3 213 aa18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.56■□□□□ 0.56
ATP2C1-224ENST00000533801 ERICH2A1L162 156 aa18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 CDC27P30260 824 aa18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 GPR101Q96P66 508 aaPredicted RBP18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 CDC5LQ99459 802 aaKnown RBP18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 LLPHQ9BRT6 129 aaKnown RBP18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 NBPF3Q9H094 633 aa18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 EPB41L4AQ9HCS5 686 aaPredicted RBP18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 ZSWIM5Q9P217 1185 aa18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 KCNJ14Q9UNX9 436 aa18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 IARSP41252 1262 aaKnown RBP18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 FBXO3Q9UK99 471 aa18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 BAZ2BQ9UIF8 2168 aaKnown RBP18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 KIF28PB7ZC32 967 aa18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 TBC1D9BQ66K14 1250 aa18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 CLSTN2Q9H4D0 955 aa18.55■□□□□ 0.56
ATP2C1-224ENST00000533801 FILIP1Q7Z7B0 1213 aa18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 FAM13BQ9NYF5 915 aa18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 HPS5Q9UPZ3 1129 aa18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 RFX7Q2KHR2 1363 aa18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 JCADQ9P266 1359 aa18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 PTGS1P23219 599 aa18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 HSP90AA4PQ58FG1 418 aa18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 UBAC1Q9BSL1 405 aa18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 ALDH8A1Q9H2A2 487 aaPredicted RBP18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 PCDHA7Q9UN72 937 aa18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 NRBP1Q9UHY1 535 aa18.54■□□□□ 0.56
ATP2C1-224ENST00000533801 CAVIN4Q5BKX8 364 aa18.53■□□□□ 0.56
ATP2C1-224ENST00000533801 SETDB2Q96T68 719 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms