RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 NUP62CLQ9H1M0 184 aa18.16■□□□□ 0.5
PPFIA1-222ENST00000532504 SH2D4AQ9H788 454 aa18.16■□□□□ 0.5
PPFIA1-222ENST00000532504 CLRN2A0PK11 232 aa18.16■□□□□ 0.5
PPFIA1-222ENST00000532504 DHX32Q7L7V1 743 aaKnown RBP18.16■□□□□ 0.5
PPFIA1-222ENST00000532504 RAD50Q92878 1312 aa18.16■□□□□ 0.5
PPFIA1-222ENST00000532504 STX6O43752 255 aa18.16■□□□□ 0.5
PPFIA1-222ENST00000532504 UBE4AQ14139 1066 aa18.16■□□□□ 0.5
PPFIA1-222ENST00000532504 CKAP2LQ8IYA6 745 aa18.16■□□□□ 0.5
PPFIA1-222ENST00000532504 PIM2Q9P1W9 311 aa18.16■□□□□ 0.5
PPFIA1-222ENST00000532504 ATP5JP18859 108 aa18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 ARHGEF10LQ9HCE6 1279 aa18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 TRAF1Q13077 416 aa18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 ODF2Q5BJF6 829 aa18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 SULF1Q8IWU6 871 aa18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 DLC1Q96QB1 1528 aa18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 PARP1P09874 1014 aaKnown RBP18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 CCDC192P0DO97 292 aa18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 DEFB132Q7Z7B7 95 aa18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 CCDC148Q8NFR7 591 aa18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 TCP11L1Q9NUJ3 509 aa18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 SCAND2PQ9GZW5 306 aaPredicted RBP18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 LEMD3Q9Y2U8 911 aa18.15■□□□□ 0.5
PPFIA1-222ENST00000532504 DCPSQ96C86 337 aaKnown RBP18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 MASTLQ96GX5 879 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 KLHL10Q6JEL2 608 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 DACH1Q9UI36 760 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 LAMC1P11047 1609 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 RTL9Q8NET4 1388 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 CALM1P0DP23 149 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 CALM2P0DP24 149 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 CALM3P0DP25 149 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 TNFAIP1Q13829 316 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 BEGAINQ9BUH8 593 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 COPRSQ9NQ92 184 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 IDEP14735 1019 aa18.14■□□□□ 0.49
PPFIA1-222ENST00000532504 GRAPQ13588 217 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 GRAPLQ8TC17 118 aaPredicted RBP18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 SDR42E1Q8WUS8 393 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 HOOK2Q96ED9 719 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 NCAPD2Q15021 1401 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 SPDYE3A6NKU9 549 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 UBA7P41226 1012 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 BTDP43251 543 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 SP4Q02446 784 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 SYCP1Q15431 976 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 BARGINQ6ZT62 677 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 CPS1P31327 1500 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 USP17L12C9JPN9 530 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 USP17L21D6R901 530 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 ANAPC15P60006 121 aa18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.13■□□□□ 0.49
PPFIA1-222ENST00000532504 ADRA2BP18089 450 aa18.12■□□□□ 0.49
PPFIA1-222ENST00000532504 RBM25P49756 843 aaKnown RBP18.12■□□□□ 0.49
PPFIA1-222ENST00000532504 FAM47AQ5JRC9 791 aa18.12■□□□□ 0.49
PPFIA1-222ENST00000532504 CPXCR1Q8N123 301 aa18.12■□□□□ 0.49
PPFIA1-222ENST00000532504 TECPR2O15040 1411 aa18.12■□□□□ 0.49
PPFIA1-222ENST00000532504 AK2P54819 239 aa18.12■□□□□ 0.49
PPFIA1-222ENST00000532504 USP48Q86UV5 1035 aa18.12■□□□□ 0.49
PPFIA1-222ENST00000532504 TTLL11Q8NHH1 800 aa18.12■□□□□ 0.49
PPFIA1-222ENST00000532504 PDE6AP16499 860 aa18.12■□□□□ 0.49
PPFIA1-222ENST00000532504 TLR7Q9NYK1 1049 aaKnown RBP18.12■□□□□ 0.49
PPFIA1-222ENST00000532504 CSADQ9Y600 493 aa18.12■□□□□ 0.49
PPFIA1-222ENST00000532504 C6orf50Q9HD87 102 aa18.11■□□□□ 0.49
PPFIA1-222ENST00000532504 CALML4Q96GE6 196 aa18.11■□□□□ 0.49
PPFIA1-222ENST00000532504 SEC62Q99442 399 aaKnown RBP18.11■□□□□ 0.49
PPFIA1-222ENST00000532504 TMC4Q7Z404 712 aa18.11■□□□□ 0.49
PPFIA1-222ENST00000532504 CERS3Q8IU89 383 aa18.11■□□□□ 0.49
PPFIA1-222ENST00000532504 NASPP49321 788 aaPredicted RBP18.11■□□□□ 0.49
PPFIA1-222ENST00000532504 NFIXQ14938 502 aa18.11■□□□□ 0.49
PPFIA1-222ENST00000532504 SLC1A4P43007 532 aa18.1■□□□□ 0.49
PPFIA1-222ENST00000532504 TFAP4Q01664 338 aa18.1■□□□□ 0.49
PPFIA1-222ENST00000532504 SLC27A2O14975 620 aa18.1■□□□□ 0.49
PPFIA1-222ENST00000532504 FSIP1Q8NA03 581 aa18.1■□□□□ 0.49
PPFIA1-222ENST00000532504 EZH2Q15910 746 aaKnown RBP18.1■□□□□ 0.49
PPFIA1-222ENST00000532504 FCHSD1Q86WN1 690 aa18.1■□□□□ 0.49
PPFIA1-222ENST00000532504 SPON1Q9HCB6 807 aa18.1■□□□□ 0.49
PPFIA1-222ENST00000532504 DBNLQ9UJU6 430 aaKnown RBP18.1■□□□□ 0.49
PPFIA1-222ENST00000532504 PI16Q6UXB8 463 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 TAOK3Q9H2K8 898 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 SNAP23O00161 211 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 RUFY3Q7L099 469 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 TRMT2AQ8IZ69 625 aaKnown RBP18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 MYL10Q9BUA6 226 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 PKD2L1Q9P0L9 805 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 NBPF26B4DH59 902 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 IGKV5-2P06315 115 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 NBPF10Q6P3W6 841 aaKnown RBP18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 NBPF15Q8N660 670 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 CNNM3Q8NE01 707 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 MST1RQ04912 1400 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 HOMER2Q9NSB8 354 aa18.09■□□□□ 0.49
PPFIA1-222ENST00000532504 BCORL1Q5H9F3 1711 aa18.08■□□□□ 0.49
PPFIA1-222ENST00000532504 MCM4P33991 863 aa18.08■□□□□ 0.49
PPFIA1-222ENST00000532504 RTKN2Q8IZC4 609 aa18.08■□□□□ 0.49
PPFIA1-222ENST00000532504 SMCR8Q8TEV9 937 aaPredicted RBP18.08■□□□□ 0.49
PPFIA1-222ENST00000532504 CLIP2Q9UDT6 1046 aa18.08■□□□□ 0.49
PPFIA1-222ENST00000532504 SGSM2O43147 1006 aa18.08■□□□□ 0.48
PPFIA1-222ENST00000532504 SPC24Q8NBT2 197 aa18.08■□□□□ 0.48
PPFIA1-222ENST00000532504 FBXO3Q9UK99 471 aa18.08■□□□□ 0.48
PPFIA1-222ENST00000532504 USP26Q9BXU7 913 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms