RNA–Protein interactions for RNA: ENST00000530310.1

NR1H3-232, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-232ENST00000530310 WNK4Q96J92 1243 aa18.39■□□□□ 0.53
NR1H3-232ENST00000530310 TDRD3Q9H7E2 651 aaKnown RBP18.39■□□□□ 0.53
NR1H3-232ENST00000530310 ZNF70Q9UC06 446 aaPredicted RBP18.39■□□□□ 0.53
NR1H3-232ENST00000530310 IQSEC3Q9UPP2 1182 aaPredicted RBP18.39■□□□□ 0.53
NR1H3-232ENST00000530310 FRAT2O75474 233 aaPredicted RBP18.38■□□□□ 0.53
NR1H3-232ENST00000530310 BCAR3O75815 825 aa18.38■□□□□ 0.53
NR1H3-232ENST00000530310 ALDH1A1P00352 501 aa18.38■□□□□ 0.53
NR1H3-232ENST00000530310 TNFAIP1Q13829 316 aa18.38■□□□□ 0.53
NR1H3-232ENST00000530310 SPDYE2Q495Y8 402 aa18.38■□□□□ 0.53
NR1H3-232ENST00000530310 NOM1Q5C9Z4 860 aaKnown RBP18.38■□□□□ 0.53
NR1H3-232ENST00000530310 ANKRD44Q8N8A2 993 aa18.38■□□□□ 0.53
NR1H3-232ENST00000530310 ARHGAP45Q92619 1136 aa18.38■□□□□ 0.53
NR1H3-232ENST00000530310 R3HDMLQ9H3Y0 253 aa18.38■□□□□ 0.53
NR1H3-232ENST00000530310 SERPINA10Q9UK55 444 aa18.38■□□□□ 0.53
NR1H3-232ENST00000530310 PTPRCP08575 1304 aa18.38■□□□□ 0.53
NR1H3-232ENST00000530310 USP2O75604 605 aaPredicted RBP18.37■□□□□ 0.53
NR1H3-232ENST00000530310 ZBTB48P10074 688 aaPredicted RBP18.37■□□□□ 0.53
NR1H3-232ENST00000530310 INHBEP58166 350 aa18.37■□□□□ 0.53
NR1H3-232ENST00000530310 ZKSCAN2Q63HK3 967 aa18.37■□□□□ 0.53
NR1H3-232ENST00000530310 IFNL1Q8IU54 200 aa18.37■□□□□ 0.53
NR1H3-232ENST00000530310 SSH1Q8WYL5 1049 aa18.37■□□□□ 0.53
NR1H3-232ENST00000530310 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
NR1H3-232ENST00000530310 CFHR5Q9BXR6 569 aa18.37■□□□□ 0.53
NR1H3-232ENST00000530310 UNCXA6NJT0 531 aa18.36■□□□□ 0.53
NR1H3-232ENST00000530310 TCP10L2B9ZVM9 353 aa18.36■□□□□ 0.53
NR1H3-232ENST00000530310 CRKP46108 304 aa18.36■□□□□ 0.53
NR1H3-232ENST00000530310 CAVIN4Q5BKX8 364 aa18.36■□□□□ 0.53
NR1H3-232ENST00000530310 FBXO33Q7Z6M2 555 aa18.36■□□□□ 0.53
NR1H3-232ENST00000530310 DZIP1LQ8IYY4 767 aaKnown RBP18.36■□□□□ 0.53
NR1H3-232ENST00000530310 ANKRD13AQ8IZ07 590 aa18.36■□□□□ 0.53
NR1H3-232ENST00000530310 EXOC6Q8TAG9 804 aa18.36■□□□□ 0.53
NR1H3-232ENST00000530310 KLHDC4Q8TBB5 520 aa18.36■□□□□ 0.53
NR1H3-232ENST00000530310 GRIK5Q16478 980 aa18.35■□□□□ 0.53
NR1H3-232ENST00000530310 SMC4Q9NTJ3 1288 aa18.35■□□□□ 0.53
NR1H3-232ENST00000530310 IGF2BP3O00425 579 aaKnown RBP eCLIP18.34■□□□□ 0.53
NR1H3-232ENST00000530310 PDE8BO95263 885 aa18.34■□□□□ 0.53
NR1H3-232ENST00000530310 TNNI2P48788 182 aa18.34■□□□□ 0.53
NR1H3-232ENST00000530310 FBXO46Q6PJ61 603 aaPredicted RBP18.34■□□□□ 0.53
NR1H3-232ENST00000530310 TBC1D22AQ8WUA7 517 aa18.34■□□□□ 0.53
NR1H3-232ENST00000530310 CRBNQ96SW2 442 aa18.34■□□□□ 0.53
NR1H3-232ENST00000530310 USP44Q9H0E7 712 aa18.34■□□□□ 0.53
NR1H3-232ENST00000530310 ELP3Q9H9T3 547 aa18.34■□□□□ 0.53
NR1H3-232ENST00000530310 ARAP2Q8WZ64 1704 aa18.33■□□□□ 0.52
NR1H3-232ENST00000530310 GJA5P36382 358 aa18.33■□□□□ 0.52
NR1H3-232ENST00000530310 BCAMP50895 628 aa18.33■□□□□ 0.52
NR1H3-232ENST00000530310 CDAN1Q8IWY9 1227 aa18.33■□□□□ 0.52
NR1H3-232ENST00000530310 VGLL2Q8N8G2 317 aa18.33■□□□□ 0.52
NR1H3-232ENST00000530310 TMEM39BQ9GZU3 492 aa18.33■□□□□ 0.52
NR1H3-232ENST00000530310 CHMP4BQ9H444 224 aaKnown RBP18.33■□□□□ 0.52
NR1H3-232ENST00000530310 IFIT1P09914 478 aaKnown RBP18.32■□□□□ 0.52
NR1H3-232ENST00000530310 OTUD7BQ6GQQ9 843 aa18.32■□□□□ 0.52
NR1H3-232ENST00000530310 TEPSINQ96N21 525 aa18.32■□□□□ 0.52
NR1H3-232ENST00000530310 PUM3Q15397 648 aaKnown RBP18.31■□□□□ 0.52
NR1H3-232ENST00000530310 ATF7IPQ6VMQ6 1270 aa18.31■□□□□ 0.52
NR1H3-232ENST00000530310 TEKT1Q969V4 418 aa18.31■□□□□ 0.52
NR1H3-232ENST00000530310 OPTNQ96CV9 577 aa18.31■□□□□ 0.52
NR1H3-232ENST00000530310 TRIM17Q9Y577 477 aa18.31■□□□□ 0.52
NR1H3-232ENST00000530310 CACNB3P54284 484 aa18.3■□□□□ 0.52
NR1H3-232ENST00000530310 HDLBPQ00341 1268 aaKnown RBP18.3■□□□□ 0.52
NR1H3-232ENST00000530310 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
NR1H3-232ENST00000530310 EYA2O00167 538 aa18.29■□□□□ 0.52
NR1H3-232ENST00000530310 MAP3K9P80192 1104 aa18.29■□□□□ 0.52
NR1H3-232ENST00000530310 CRHR2Q13324 411 aa18.29■□□□□ 0.52
NR1H3-232ENST00000530310 C20orf194Q5TEA3 1177 aa18.29■□□□□ 0.52
NR1H3-232ENST00000530310 B4GALNT3Q6L9W6 998 aa18.29■□□□□ 0.52
NR1H3-232ENST00000530310 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.29■□□□□ 0.52
NR1H3-232ENST00000530310 MAST3O60307 1309 aa18.28■□□□□ 0.52
NR1H3-232ENST00000530310 SLC5A1P13866 664 aa18.28■□□□□ 0.52
NR1H3-232ENST00000530310 FGFR2P21802 821 aa18.28■□□□□ 0.52
NR1H3-232ENST00000530310 RFX5P48382 616 aaPredicted RBP18.28■□□□□ 0.52
NR1H3-232ENST00000530310 VGLL4Q14135 290 aa18.28■□□□□ 0.52
NR1H3-232ENST00000530310 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
NR1H3-232ENST00000530310 ERO1AQ96HE7 468 aa18.28■□□□□ 0.52
NR1H3-232ENST00000530310 PTPN18Q99952 460 aa18.28■□□□□ 0.52
NR1H3-232ENST00000530310 CSADQ9Y600 493 aa18.28■□□□□ 0.52
NR1H3-232ENST00000530310 OTOFQ9HC10 1997 aa18.28■□□□□ 0.52
NR1H3-232ENST00000530310 TESPA1A2RU30 521 aaPredicted RBP18.27■□□□□ 0.52
NR1H3-232ENST00000530310 OTOP1Q7RTM1 612 aa18.27■□□□□ 0.52
NR1H3-232ENST00000530310 FTSJ3Q8IY81 847 aaKnown RBP18.27■□□□□ 0.52
NR1H3-232ENST00000530310 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.27■□□□□ 0.52
NR1H3-232ENST00000530310 CD99L2Q8TCZ2 262 aa18.27■□□□□ 0.52
NR1H3-232ENST00000530310 LPIN2Q92539 896 aa18.27■□□□□ 0.52
NR1H3-232ENST00000530310 FRAT1Q92837 279 aaPredicted RBP18.27■□□□□ 0.52
NR1H3-232ENST00000530310 ZDHHC15Q96MV8 337 aa18.27■□□□□ 0.52
NR1H3-232ENST00000530310 API5Q9BZZ5 524 aaKnown RBP18.27■□□□□ 0.52
NR1H3-232ENST00000530310 CCL15-CCL14A0A0B4J2E2 113 aa18.26■□□□□ 0.51
NR1H3-232ENST00000530310 SLC34A2O95436 690 aa18.26■□□□□ 0.51
NR1H3-232ENST00000530310 UBTFL1P0CB47 393 aaPredicted RBP18.26■□□□□ 0.51
NR1H3-232ENST00000530310 MVPQ14764 893 aaKnown RBP18.26■□□□□ 0.51
NR1H3-232ENST00000530310 CCL15Q16663 113 aa18.26■□□□□ 0.51
NR1H3-232ENST00000530310 OTUD5Q96G74 571 aa18.26■□□□□ 0.51
NR1H3-232ENST00000530310 SIL1Q9H173 461 aa18.26■□□□□ 0.51
NR1H3-232ENST00000530310 DDX19BQ9UMR2 479 aa18.26■□□□□ 0.51
NR1H3-232ENST00000530310 SUGT1Q9Y2Z0 365 aa18.26■□□□□ 0.51
NR1H3-232ENST00000530310 LAMB1P07942 1786 aa18.25■□□□□ 0.51
NR1H3-232ENST00000530310 TRIM27P14373 513 aa18.25■□□□□ 0.51
NR1H3-232ENST00000530310 GTF2A2P52657 109 aa18.25■□□□□ 0.51
NR1H3-232ENST00000530310 APOBEC3HQ6NTF7 200 aaKnown RBP18.25■□□□□ 0.51
NR1H3-232ENST00000530310 CENPQQ7L2Z9 268 aaPredicted RBP18.25■□□□□ 0.51
NR1H3-232ENST00000530310 WDR66Q8TBY9 1149 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms