RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-213	ENST00000528999	PPP2R5B	Q15173	497 aa		12.51	□□□□□ -0.41
PUF60-213	ENST00000528999	GIMAP6	Q6P9H5	292 aa		12.51	□□□□□ -0.41
PUF60-213	ENST00000528999	PI16	Q6UXB8	463 aa		12.51	□□□□□ -0.41
PUF60-213	ENST00000528999	IFNL3	Q8IZI9	196 aa		12.51	□□□□□ -0.41
PUF60-213	ENST00000528999	FBXO18	Q8NFZ0	1043 aa		12.51	□□□□□ -0.41
PUF60-213	ENST00000528999	RNF41	Q9H4P4	317 aa	Predicted RBP	12.51	□□□□□ -0.41
PUF60-213	ENST00000528999	USP25	Q9UHP3	1055 aa		12.51	□□□□□ -0.41
PUF60-213	ENST00000528999	HPS5	Q9UPZ3	1129 aa		12.51	□□□□□ -0.41
PUF60-213	ENST00000528999	ZKSCAN5	Q9Y2L8	839 aa		12.51	□□□□□ -0.41
PUF60-213	ENST00000528999	ZNF804B	A4D1E1	1349 aa		12.51	□□□□□ -0.41
PUF60-213	ENST00000528999	LAMA4	Q16363	1823 aa		12.51	□□□□□ -0.41
PUF60-213	ENST00000528999	NUTM2B	A6NNL0	878 aa	Predicted RBP	12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	NUTM2E	B1AL46	878 aa	Predicted RBP	12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	SH2B2	O14492	632 aa	Predicted RBP	12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	RPS6KA4	O75676	772 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	YEATS4	O95619	227 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	LIG1	P18858	919 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	HMGB2	P26583	209 aa	Known RBP	12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	HAND2	P61296	217 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	CHRND	Q07001	517 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	RASGRF1	Q13972	1273 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	NUTM2A	Q8IVF1	878 aa	Predicted RBP	12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	RNF214	Q8ND24	703 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	FAM200A	Q8TCP9	573 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	IGDCC4	Q8TDY8	1250 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	WASF1	Q92558	559 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	PGBD1	Q96JS3	809 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	C8orf76	Q96K31	380 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	NAPB	Q9H115	298 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	SEC31B	Q9NQW1	1179 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	DACT1	Q9NYF0	836 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	ORC3	Q9UBD5	711 aa	Predicted RBP	12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	NARF	Q9UHQ1	456 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	LAMB2	P55268	1798 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	MYH7	P12883	1935 aa		12.5	□□□□□ -0.41
PUF60-213	ENST00000528999	NID2	Q14112	1375 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999		A0A0G2JLW4	131 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	GOLGA8B	A8MQT2	603 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	CAVIN4	Q5BKX8	364 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	AKNAD1	Q5T1N1	836 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	ADAL	Q6DHV7	355 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	FAM173B	Q6P4H8	233 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	SASS6	Q6UVJ0	657 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	SYNE3	Q6ZMZ3	975 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	MAGEB6	Q8N7X4	407 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	HELB	Q8NG08	1087 aa	Predicted RBP	12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	BICD2	Q8TD16	824 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	KCNG4	Q8TDN1	519 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	STAG1	Q8WVM7	1258 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	ANKRD2	Q9GZV1	360 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	NBPF3	Q9H094	633 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	POLR3E	Q9NVU0	708 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	ANAPC4	Q9UJX5	808 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	WWC3	Q9ULE0	1092 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	DENND2A	Q9ULE3	1009 aa		12.49	□□□□□ -0.41
PUF60-213	ENST00000528999	STK36	Q9NRP7	1315 aa		12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	GSG1L2	A8MUP6	293 aa		12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	OFD1	O75665	1012 aa		12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	TYRO3	Q06418	890 aa		12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	SART3	Q15020	963 aa	Known RBP	12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	CCDC73	Q6ZRK6	1079 aa		12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	MFSD6	Q6ZSS7	791 aa		12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	CHST3	Q7LGC8	479 aa		12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	LINC00116	Q8NCU8	138 aa		12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	NGLY1	Q96IV0	654 aa		12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	NCOA5	Q9HCD5	579 aa	Known RBP	12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	LRP2BP	Q9P2M1	347 aa		12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.48	□□□□□ -0.41
PUF60-213	ENST00000528999	BCL9L	Q86UU0	1499 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	SPATA31A6	Q5VVP1	1343 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	CCDC196	A0A1B0GTZ2	297 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	GOLGA6L6	A8MZA4	724 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	ZBTB43	O43298	467 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	MBD4	O95243	580 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	ADCY5	O95622	1261 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	PTMA	P06454	111 aa	Known RBP	12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	METAP2	P50579	478 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	BCAM	P50895	628 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	FAM160A1	Q05DH4	1040 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	TPTE2	Q6XPS3	522 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	TBC1D10C	Q8IV04	446 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	CCAR1	Q8IX12	1150 aa	Known RBP	12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	NLRP3	Q96P20	1036 aa		12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	COL5A3	P25940	1745 aa	Predicted RBP	12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	DDX60	Q8IY21	1712 aa	Known RBP	12.47	□□□□□ -0.41
PUF60-213	ENST00000528999	BCOR	Q6W2J9	1755 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	KCNQ2	O43526	872 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	NR1I2	O75469	434 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	FAM98C	Q17RN3	349 aa	Known RBP	12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	ERFE	Q4G0M1	354 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	TMEM67	Q5HYA8	995 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	APOA5	Q6Q788	366 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	CYB5R4	Q7L1T6	521 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	FBXO33	Q7Z6M2	555 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	LINC00301	Q8NCQ3	95 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	ENGASE	Q8NFI3	743 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	USP28	Q96RU2	1077 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	SETDB2	Q96T68	719 aa		12.46	□□□□□ -0.41
PUF60-213	ENST00000528999	LY9	Q9HBG7	655 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms