RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 GRAPQ13588 217 aa9.07□□□□□ -0.96
ITGB1-218ENST00000528877 TWISTNBQ3B726 338 aaPredicted RBP9.07□□□□□ -0.96
ITGB1-218ENST00000528877 PLA2G2CQ5R387 149 aa9.07□□□□□ -0.96
ITGB1-218ENST00000528877 ZNF697Q5TEC3 545 aa9.07□□□□□ -0.96
ITGB1-218ENST00000528877 MYSM1Q5VVJ2 828 aa9.07□□□□□ -0.96
ITGB1-218ENST00000528877 SYNE4Q8N205 404 aa9.07□□□□□ -0.96
ITGB1-218ENST00000528877 GRAPLQ8TC17 118 aaPredicted RBP9.07□□□□□ -0.96
ITGB1-218ENST00000528877 METTL22Q9BUU2 404 aaPredicted RBP9.07□□□□□ -0.96
ITGB1-218ENST00000528877 RRAGCQ9HB90 399 aa9.07□□□□□ -0.96
ITGB1-218ENST00000528877 CDHR2Q9BYE9 1310 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 ATP5J2-PTCD1G3V325 749 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 ELL2O00472 640 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-218ENST00000528877 PCCAP05165 728 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-218ENST00000528877 PRR20EP86478 221 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 PRR20CP86479 221 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 PRR20DP86480 221 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 PRR20BP86481 221 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 PRR20AP86496 221 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 DDX46Q7L014 1031 aaKnown RBP9.06□□□□□ -0.96
ITGB1-218ENST00000528877 SLC51AQ86UW1 340 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 SP8Q8IXZ3 490 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 GPC2Q8N158 579 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
ITGB1-218ENST00000528877 EMID1Q96A84 441 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-218ENST00000528877 FAM89AQ96GI7 184 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 STK31Q9BXU1 1019 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 RTL9Q8NET4 1388 aa9.06□□□□□ -0.96
ITGB1-218ENST00000528877 IRS4O14654 1257 aaPredicted RBP9.05□□□□□ -0.96
ITGB1-218ENST00000528877 DDNO94850 711 aaPredicted RBP9.05□□□□□ -0.96
ITGB1-218ENST00000528877 PTPRNQ16849 979 aa9.05□□□□□ -0.96
ITGB1-218ENST00000528877 KSR2Q6VAB6 950 aa9.05□□□□□ -0.96
ITGB1-218ENST00000528877 SUPT20HQ8NEM7 779 aa9.05□□□□□ -0.96
ITGB1-218ENST00000528877 PRR7Q8TB68 274 aa9.05□□□□□ -0.96
ITGB1-218ENST00000528877 MYD88Q99836 296 aa9.05□□□□□ -0.96
ITGB1-218ENST00000528877 MYH16Q9H6N6 1097 aa9.05□□□□□ -0.96
ITGB1-218ENST00000528877 CWC25Q9NXE8 425 aaPredicted RBP9.05□□□□□ -0.96
ITGB1-218ENST00000528877 ZNF609O15014 1411 aa9.05□□□□□ -0.96
ITGB1-218ENST00000528877 MYH3P11055 1940 aa9.04□□□□□ -0.96
ITGB1-218ENST00000528877 PI4KAP2A4QPH2 592 aa9.04□□□□□ -0.96
ITGB1-218ENST00000528877 IGKV5-2P06315 115 aa9.04□□□□□ -0.96
ITGB1-218ENST00000528877 KIAA2012Q0VF49 1180 aa9.04□□□□□ -0.96
ITGB1-218ENST00000528877 FLIIQ13045 1269 aa9.04□□□□□ -0.96
ITGB1-218ENST00000528877 DPP8Q6V1X1 898 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-218ENST00000528877 PI4KAP1Q8N8J0 262 aa9.04□□□□□ -0.96
ITGB1-218ENST00000528877 JDP2Q8WYK2 163 aa9.04□□□□□ -0.96
ITGB1-218ENST00000528877 NUDT12Q9BQG2 462 aa9.04□□□□□ -0.96
ITGB1-218ENST00000528877 TMX4Q9H1E5 349 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-218ENST00000528877 TAF1DQ9H5J8 278 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-218ENST00000528877 MAP3K2Q9Y2U5 619 aa9.04□□□□□ -0.96
ITGB1-218ENST00000528877 TAF1P21675 1872 aa9.03□□□□□ -0.96
ITGB1-218ENST00000528877 NEURL1BA8MQ27 555 aa9.03□□□□□ -0.96
ITGB1-218ENST00000528877 PPIP5K2O43314 1243 aa9.03□□□□□ -0.96
ITGB1-218ENST00000528877 VAMP4O75379 141 aa9.03□□□□□ -0.96
ITGB1-218ENST00000528877 CLK2P49760 499 aaKnown RBP9.03□□□□□ -0.96
ITGB1-218ENST00000528877 NEXNQ0ZGT2 675 aa9.03□□□□□ -0.96
ITGB1-218ENST00000528877 LDHDQ86WU2 507 aa9.03□□□□□ -0.96
ITGB1-218ENST00000528877 NIM1KQ8IY84 436 aa9.03□□□□□ -0.96
ITGB1-218ENST00000528877 LARGE2Q8N3Y3 721 aa9.03□□□□□ -0.96
ITGB1-218ENST00000528877 DNAJC5GQ8N7S2 189 aa9.03□□□□□ -0.96
ITGB1-218ENST00000528877 CELF1Q92879 486 aaKnown RBP9.03□□□□□ -0.96
ITGB1-218ENST00000528877 PODXL2Q9NZ53 605 aa9.03□□□□□ -0.96
ITGB1-218ENST00000528877 HACL1Q9UJ83 578 aa9.03□□□□□ -0.96
ITGB1-218ENST00000528877 PDE8AO60658 829 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 CCNYL3P0C7X3 344 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 SCNN1DP51172 638 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 CTSWP56202 376 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 EIF6P56537 245 aaKnown RBP9.02□□□□□ -0.97
ITGB1-218ENST00000528877 EXOSC9Q06265 439 aaKnown RBP9.02□□□□□ -0.97
ITGB1-218ENST00000528877 TRIM32Q13049 653 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 AOC3Q16853 763 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 CCDC152Q4G0S7 254 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 SH3D19Q5HYK7 790 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 G2E3Q7L622 706 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 PNMA8AQ86V59 439 aaPredicted RBP9.02□□□□□ -0.97
ITGB1-218ENST00000528877 FAM9BQ8IZU0 186 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 MPNDQ8N594 471 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 PASKQ96RG2 1323 aa9.02□□□□□ -0.97
ITGB1-218ENST00000528877 LOC100996750A0A140TA64 210 aa9.01□□□□□ -0.97
ITGB1-218ENST00000528877 CCER2I3L3R5 266 aa9.01□□□□□ -0.97
ITGB1-218ENST00000528877 EPHX2P34913 555 aa9.01□□□□□ -0.97
ITGB1-218ENST00000528877 CASP7P55210 303 aa9.01□□□□□ -0.97
ITGB1-218ENST00000528877 GCKRQ14397 625 aa9.01□□□□□ -0.97
ITGB1-218ENST00000528877 TPRNQ4KMQ1 711 aa9.01□□□□□ -0.97
ITGB1-218ENST00000528877 LINS1Q8NG48 757 aa9.01□□□□□ -0.97
ITGB1-218ENST00000528877 PLA2G12BQ9BX93 195 aa9.01□□□□□ -0.97
ITGB1-218ENST00000528877 KRTAP4-6Q9BYQ5 205 aa9.01□□□□□ -0.97
ITGB1-218ENST00000528877 ZNRF3Q9ULT6 936 aa9.01□□□□□ -0.97
ITGB1-218ENST00000528877 PCDHB15Q9Y5E8 787 aa9.01□□□□□ -0.97
ITGB1-218ENST00000528877 H7C1W4 665 aa9□□□□□ -0.97
ITGB1-218ENST00000528877 WNT7BP56706 349 aa9□□□□□ -0.97
ITGB1-218ENST00000528877 RPS8P62241 208 aaKnown RBP9□□□□□ -0.97
ITGB1-218ENST00000528877 FKBP5Q13451 457 aaPredicted RBP9□□□□□ -0.97
ITGB1-218ENST00000528877 SKIV2LQ15477 1246 aaKnown RBP9□□□□□ -0.97
ITGB1-218ENST00000528877 CWF19L2Q2TBE0 894 aaKnown RBP9□□□□□ -0.97
ITGB1-218ENST00000528877 JMYQ8N9B5 988 aa9□□□□□ -0.97
ITGB1-218ENST00000528877 TTLL11Q8NHH1 800 aa9□□□□□ -0.97
ITGB1-218ENST00000528877 DNAAF4Q8WXU2 420 aa9□□□□□ -0.97
ITGB1-218ENST00000528877 KLRG1Q96E93 195 aa9□□□□□ -0.97
ITGB1-218ENST00000528877 LIMD1Q9UGP4 676 aa9□□□□□ -0.97
ITGB1-218ENST00000528877 THSD7BQ9C0I4 1608 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms