RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 PKNOX2Q96KN3 472 aa15.36■□□□□ 0.05
RBM39-243ENST00000528062 FHDC1Q9C0D6 1143 aaPredicted RBP15.36■□□□□ 0.05
RBM39-243ENST00000528062 SIL1Q9H173 461 aa15.36■□□□□ 0.05
RBM39-243ENST00000528062 CD2APQ9Y5K6 639 aa15.36■□□□□ 0.05
RBM39-243ENST00000528062 GRAPQ13588 217 aa15.35■□□□□ 0.05
RBM39-243ENST00000528062 TOB2Q14106 344 aaPredicted RBP15.35■□□□□ 0.05
RBM39-243ENST00000528062 ZNF589Q86UQ0 364 aaPredicted RBP15.35■□□□□ 0.05
RBM39-243ENST00000528062 ZNF710Q8N1W2 664 aa15.35■□□□□ 0.05
RBM39-243ENST00000528062 GRAPLQ8TC17 118 aaPredicted RBP15.35■□□□□ 0.05
RBM39-243ENST00000528062 MASTLQ96GX5 879 aa15.35■□□□□ 0.05
RBM39-243ENST00000528062 PPP1R1BQ9UD71 204 aaPredicted RBP15.35■□□□□ 0.05
RBM39-243ENST00000528062 MED23Q9ULK4 1368 aa15.35■□□□□ 0.05
RBM39-243ENST00000528062 H0YIN7 160 aa15.35■□□□□ 0.05
RBM39-243ENST00000528062 CAMK4Q16566 473 aa15.35■□□□□ 0.05
RBM39-243ENST00000528062 DDX46Q7L014 1031 aaKnown RBP15.35■□□□□ 0.05
RBM39-243ENST00000528062 SPC24Q8NBT2 197 aa15.35■□□□□ 0.05
RBM39-243ENST00000528062 PRIMPOLQ96LW4 560 aa15.35■□□□□ 0.05
RBM39-243ENST00000528062 CRAMP1Q96RY5 1269 aa15.35■□□□□ 0.05
RBM39-243ENST00000528062 CCDC192P0DO97 292 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 TGFB2P61812 414 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 KRT85P78386 507 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 G3BP1Q13283 466 aaKnown RBP eCLIP15.34■□□□□ 0.05
RBM39-243ENST00000528062 STYK1Q6J9G0 422 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 KIAA1524Q8TCG1 905 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 EDC3Q96F86 508 aaKnown RBP15.34■□□□□ 0.05
RBM39-243ENST00000528062 FSD1Q9BTV5 496 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 SNED1Q8TER0 1413 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 RPS6KB1P23443 525 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 RPS8P62241 208 aaKnown RBP15.34■□□□□ 0.05
RBM39-243ENST00000528062 OLFM4Q6UX06 510 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 RIPOR2Q9Y4F9 1068 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 MRVI1Q9Y6F6 885 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 ARFGEF1Q9Y6D6 1849 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 DUOX1Q9NRD9 1551 aa15.34■□□□□ 0.05
RBM39-243ENST00000528062 HIP1O00291 1037 aa15.33■□□□□ 0.04
RBM39-243ENST00000528062 PSMA5P28066 241 aa15.33■□□□□ 0.04
RBM39-243ENST00000528062 GTF2F1P35269 517 aaKnown RBP eCLIP15.33■□□□□ 0.04
RBM39-243ENST00000528062 HMGN5P82970 282 aaKnown RBP15.33■□□□□ 0.04
RBM39-243ENST00000528062 BLOC1S2Q6QNY1 142 aa15.33■□□□□ 0.04
RBM39-243ENST00000528062 ZNF622Q969S3 477 aaKnown RBP eCLIP15.33■□□□□ 0.047e-10■■□□□ 11.9
RBM39-243ENST00000528062 RBM17Q96I25 401 aaKnown RBP15.33■□□□□ 0.04
RBM39-243ENST00000528062 ELP1O95163 1332 aa15.33■□□□□ 0.04
RBM39-243ENST00000528062 MTERF4Q7Z6M4 381 aaKnown RBP15.33■□□□□ 0.04
RBM39-243ENST00000528062 ANKRD18AQ8IVF6 992 aa15.33■□□□□ 0.04
RBM39-243ENST00000528062 CDC5LQ99459 802 aaKnown RBP15.33■□□□□ 0.04
RBM39-243ENST00000528062 TFIP11Q9UBB9 837 aaKnown RBP15.33■□□□□ 0.04
RBM39-243ENST00000528062 WWC3Q9ULE0 1092 aa15.33■□□□□ 0.04
RBM39-243ENST00000528062 WTIPA6NIX2 430 aaPredicted RBP15.32■□□□□ 0.04
RBM39-243ENST00000528062 EYA2O00167 538 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 TYRO3Q06418 890 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 STK3Q13188 491 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 MAP3K11Q16584 847 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 LDHAL6AQ6ZMR3 332 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 LUZP1Q86V48 1076 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 VGLL2Q8N8G2 317 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 FAM200AQ8TCP9 573 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 NUP62CLQ9H1M0 184 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 ARAP2Q8WZ64 1704 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 CKAP2LQ8IYA6 745 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 BSDC1Q9NW68 430 aaPredicted RBP15.32■□□□□ 0.04
RBM39-243ENST00000528062 DACT1Q9NYF0 836 aa15.32■□□□□ 0.04
RBM39-243ENST00000528062 CIAO1O76071 339 aa15.31■□□□□ 0.04
RBM39-243ENST00000528062 CHGBP05060 677 aa15.31■□□□□ 0.04
RBM39-243ENST00000528062 TAF7LQ5H9L4 462 aa15.31■□□□□ 0.04
RBM39-243ENST00000528062 C7orf43Q8WVR3 580 aa15.31■□□□□ 0.04
RBM39-243ENST00000528062 SYT17Q9BSW7 474 aa15.31■□□□□ 0.04
RBM39-243ENST00000528062 MINPP1Q9UNW1 487 aa15.31■□□□□ 0.04
RBM39-243ENST00000528062 ZBTB22O15209 634 aa15.31■□□□□ 0.04
RBM39-243ENST00000528062 TAF5LO75529 589 aa15.31■□□□□ 0.04
RBM39-243ENST00000528062 PDCP20941 246 aa15.31■□□□□ 0.04
RBM39-243ENST00000528062 IGHMBP2P38935 993 aaKnown RBP15.31■□□□□ 0.04
RBM39-243ENST00000528062 ALDH8A1Q9H2A2 487 aaPredicted RBP15.31■□□□□ 0.04
RBM39-243ENST00000528062 FER1L6Q2WGJ9 1857 aa15.3■□□□□ 0.04
RBM39-243ENST00000528062 SNAP23O00161 211 aa15.3■□□□□ 0.04
RBM39-243ENST00000528062 PPEF1O14829 653 aaPredicted RBP15.3■□□□□ 0.04
RBM39-243ENST00000528062 JAK2O60674 1132 aa15.3■□□□□ 0.04
RBM39-243ENST00000528062 RNF20Q5VTR2 975 aa15.3■□□□□ 0.04
RBM39-243ENST00000528062 LEO1Q8WVC0 666 aaPredicted RBP15.3■□□□□ 0.04
RBM39-243ENST00000528062 NDUFB9Q9Y6M9 179 aa15.3■□□□□ 0.04
RBM39-243ENST00000528062 ALDH1B1P30837 517 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 ANKRD1Q15327 319 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 MPHOSPH8Q99549 860 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 BBOX1O75936 387 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 PTGS1P23219 599 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 CHRNDQ07001 517 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 TFCP2Q12800 502 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 TSGA10IPQ3SY00 556 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 HELBQ8NG08 1087 aaPredicted RBP15.29■□□□□ 0.04
RBM39-243ENST00000528062 PGBD1Q96JS3 809 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 SPATA32Q96LK8 384 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 TNMDQ9H2S6 317 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 CBX8Q9HC52 389 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 CNNM1Q9NRU3 951 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 FBXO3Q9UK99 471 aa15.29■□□□□ 0.04
RBM39-243ENST00000528062 ANO6Q4KMQ2 910 aa15.28■□□□□ 0.04
RBM39-243ENST00000528062 CNKSR1Q969H4 720 aa15.28■□□□□ 0.04
RBM39-243ENST00000528062 SCAND2PQ9GZW5 306 aaPredicted RBP15.28■□□□□ 0.04
RBM39-243ENST00000528062 ATP6V0A2Q9Y487 856 aa15.28■□□□□ 0.04
RBM39-243ENST00000528062 IL15P40933 162 aaPredicted RBP15.28■□□□□ 0.04
RBM39-243ENST00000528062 RBM43Q6ZSC3 357 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms